# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_3	LOCUS_00030	sequence1:3357..3614(+)	frameshift		3864,3593	WP_003400273.1	DNA replication/repair protein RecF	92.9	20.5	83.5
MGA_4	LOCUS_00040	sequence1:3688..3885(+)	frameshift		3864,3593	WP_011726603.1	DNA replication/repair protein RecF	92.3	15.6	85.0
MGA_5	LOCUS_00050	sequence1:3911..4516(+)	frameshift		3867	WP_003400273.1	DNA replication/repair protein RecF	99.5	51.9	67.0
MGA_6	LOCUS_00060	sequence1:4732..5061(+)	partial			WP_003899769.1	DNA replication protein DciA	99.1	57.8	79.6
MGA_8	LOCUS_00080	sequence1:7375..10479(+)	partial			WP_012634405.1	intein-containing DNA gyrase subunit A	73.9	63.7	86.2
MGA_10	LOCUS_00100	sequence1:11056..11400(+)	frameshift		10816	WP_003400291.1	DUF3566 domain-containing protein	100.0	37.5	87.7
MGA_12	LOCUS_00120	sequence1:13387..14046(-)	frameshift		13473,13461,13463,13464,13419	WP_010950451.1	PE family protein	61.2	16.1	44.0
MGA_27	LOCUS_00270	sequence1:27975..29609(-)	partial			WP_003912368.1	cell division-associated protein FhaA	33.6	35.5	80.7
MGA_30	LOCUS_00300	sequence1:32130..33074(+)	frameshift		32975	WP_011727070.1	PPE family protein	86.0	52.0	51.6
MGA_32	LOCUS_00320	sequence1:33643..33903(-)	partial			WP_011031865.1	N-acetyltransferase	90.7	69.6	55.1
MGA_39	LOCUS_00390	sequence1:39056..40543(+)	partial			WP_015287743.1	DUF4226 domain-containing protein	40.4	39.1	55.0
MGA_48	LOCUS_00480	sequence1:49053..50006(+)	frameshift		49952	WP_003899752.1	PPE family protein	85.8	68.2	36.4
MGA_65	LOCUS_00640	sequence1:67738..69537(+)	frameshift		69501,69805	WP_031651598.1	transglycosylase/D,D-transpeptidase PonA1	99.5	70.6	75.2
MGA_66	LOCUS_00650	sequence1:69509..69937(+)	frameshift		69504,69811,70079	WP_172591938.1	transglycosylase domain-containing protein	71.1	12.2	88.1
MGA_67	LOCUS_00660	sequence1:69879..70130(+)	frameshift		69811,70079	WP_031651598.1	transglycosylase/D,D-transpeptidase PonA1	81.9	8.3	91.2
MGA_68	LOCUS_00670	sequence1:70300..71247(+)	frameshift		70998,71215	WP_003400514.1	glycosyltransferase family 87 protein	72.1	40.5	81.9
MGA_69	LOCUS_00680	sequence1:71244..71933(+)	frameshift		71001,71218	WP_011731615.1	glycosyltransferase family 87 protein	95.6	39.5	74.9
MGA_70	LOCUS_00690	sequence1:71933..72172(+)	frameshift		72085	WP_011031152.1	DJ-1/PfpI family protein	63.3	23.7	52.0
MGA_71	LOCUS_00700	sequence1:72078..72572(+)	frameshift		72085	WP_003400517.1	DJ-1/PfpI family protein	89.6	78.6	67.3
MGA_76	LOCUS_00750	sequence1:75568..76257(+)	partial			WP_010909028.1	replicative DNA helicase	98.7	37.4	95.1
MGA_78	LOCUS_00770	sequence1:77423..77629(+)	partial			WP_011731575.1	haloalkane dehalogenase	80.9	17.7	81.8
MGA_81	LOCUS_00800	sequence1:79892..80236(+)	frameshift		79883	WP_004194694.1	cytochrome c oxidase subunit 3 family protein	89.5	48.3	40.2
MGA_85	LOCUS_00840	sequence1:81807..82799(+)	frameshift		82757	WP_189327688.1	IS21 family transposase	96.4	57.1	53.6
MGA_86	LOCUS_00850	sequence1:82859..83620(+)	frameshift,internal_stop_codon	83334..83336(+)	82763,83348,83285	WP_189327688.1	IS21 family transposase	76.7	34.5	41.9
MGA_88	LOCUS_00870	sequence1:84390..84887(+)	partial			WP_150135106.1	hypothetical protein	91.5	61.2	35.1
MGA_93	LOCUS_00920	sequence1:90151..91815(-)	partial			WP_003243243.1	PEP/pyruvate-binding domain-containing protein	33.0	23.0	32.1
MGA_97	LOCUS_00960	sequence1:95309..98053(-)	partial			WP_011250243.1	phosphoenolpyruvate synthase	32.6	39.6	45.4
MGA_107	LOCUS_01060	sequence1:105618..107270(+)	partial			WP_003410309.1	sugar epimerase family protein	50.0	29.6	33.7
MGA_109	LOCUS_01080	sequence1:109122..109910(+)	partial			WP_010943304.1	TetR/AcrR family transcriptional regulator	27.5	35.2	40.0
MGA_111	LOCUS_01100	sequence1:111009..111587(-)	partial			WP_010943063.1	SagB/ThcOx family dehydrogenase	96.4	58.5	41.9
MGA_112	LOCUS_01110	sequence1:112416..112757(+)	frameshift		112378,112143	WP_049745538.1	TetR/AcrR family transcriptional regulator	96.5	40.8	51.4
MGA_114	LOCUS_01130	sequence1:113683..114099(-)	partial			WP_003403365.1	ribonuclease VapC6	74.6	81.1	75.7
MGA_117	LOCUS_01160	sequence1:114980..115270(+)	partial			WP_011727666.1	cytochrome P450	77.1	17.8	77.0
MGA_122	LOCUS_01210	sequence1:121223..121420(+)	frameshift		121406,121190	WP_011031099.1	aromatic ring-hydroxylating dioxygenase subunit alpha	92.3	17.3	54.8
MGA_123	LOCUS_01220	sequence1:121398..122165(+)	frameshift		121406,121190	WP_011031099.1	aromatic ring-hydroxylating dioxygenase subunit alpha	91.8	67.7	29.0
MGA_129	LOCUS_01280	sequence1:127505..128170(-)	frameshift		128204	WP_013224387.1	MaoC/PaaZ C-terminal domain-containing protein	97.7	76.0	47.7
MGA_130	LOCUS_01290	sequence1:128121..128366(-)	frameshift		128204	WP_011730907.1	MaoC/PaaZ C-terminal domain-containing protein	66.7	18.9	55.6
MGA_133	LOCUS_01320	sequence1:133483..133773(-)	frameshift		133497	WP_013225258.1	FAD-dependent oxidoreductase	85.4	16.8	48.8
MGA_146	LOCUS_01450	sequence1:147708..148058(+)	frameshift		147766	WP_003899110.1	Mce associated membrane protein	82.8	60.0	58.3
MGA_147	LOCUS_01460	sequence1:148094..148594(+)	partial			WP_003899112.1	CAP domain-containing protein	98.8	70.1	64.0
MGA_151	LOCUS_01500	sequence1:151417..152232(+)	partial			WP_003411445.1	SDR family oxidoreductase	70.1	31.2	36.3
MGA_161	LOCUS_01600	sequence1:160128..161105(+)	partial			WP_011027829.1	phosphatidylinositol mannoside acyltransferase	57.5	57.2	33.3
MGA_183	LOCUS_01820	sequence1:181613..182866(+)	partial			WP_011729359.1	DNA polymerase I	49.2	23.6	59.8
MGA_184	LOCUS_01830	sequence1:182976..184322(+)	frameshift		183920,184143	WP_011088844.1	FAD-dependent monooxygenase	68.1	59.1	63.6
MGA_189	LOCUS_01880	sequence1:189368..190225(-)	partial			WP_067118245.1	LLM class F420-dependent oxidoreductase	69.5	69.0	38.0
MGA_201	LOCUS_02000	sequence1:199883..200830(-)	partial			WP_013532194.1	FAD-dependent oxidoreductase	73.7	70.3	28.5
MGA_217	LOCUS_02160	sequence1:218094..218633(-)	frameshift		218655	WP_012804588.1	selenide, water dikinase SelD	100.0	53.0	71.5
MGA_231	LOCUS_02300	sequence1:233400..233831(+)	frameshift		233814,233711	WP_003419381.1	alpha/beta fold hydrolase	84.6	42.3	40.8
MGA_232	LOCUS_02310	sequence1:233840..234277(+)	frameshift		233720,233793	WP_005095284.1	alpha/beta fold hydrolase	92.4	44.3	34.5
MGA_238	LOCUS_02370	sequence1:241359..242681(-)	partial			WP_010926041.1	aromatic ring-hydroxylating dioxygenase subunit alpha	45.9	52.5	31.7
MGA_240	LOCUS_02390	sequence1:244604..244858(-)	partial			WP_011731059.1	anti-sigma factor	84.5	48.0	49.3
MGA_244	LOCUS_02430	sequence1:247684..248520(+)	partial			WP_011729120.1	FAD-dependent oxidoreductase	93.2	55.1	47.1
MGA_263	LOCUS_02620	sequence1:268182..268613(+)	partial			WP_003419293.1	3-oxo-23,24-bisnorchol-4,17(20)-dien-22-oyl-CoA hydratase subunit alpha ChsH2	85.3	36.7	34.4
MGA_264	LOCUS_02630	sequence1:268658..269335(+)	partial			WP_005087452.1	PadR family transcriptional regulator	77.3	73.4	32.6
MGA_268	LOCUS_02670	sequence1:273073..273555(+)	partial			WP_003400664.1	SRPBCC family protein	96.9	69.2	77.4
MGA_270	LOCUS_02690	sequence1:275114..275776(+)	frameshift		275716,275719	WP_010886133.1	PE family protein	58.6	25.9	55.0
MGA_272	LOCUS_02710	sequence1:277092..277553(+)	frameshift		277457,277716	WP_005112406.1	sulfate ABC transporter substrate-binding protein	66.7	28.2	62.9
MGA_273	LOCUS_02720	sequence1:277703..278149(+)	frameshift		277457,277719	WP_005112406.1	sulfate ABC transporter substrate-binding protein	89.2	35.5	71.2
MGA_277	LOCUS_02760	sequence1:281527..281733(-)	frameshift		281550,281782	WP_011731385.1	SDR family NAD(P)-dependent oxidoreductase	94.1	22.5	79.7
MGA_300	LOCUS_02990	sequence1:302490..303083(+)	frameshift		303053	WP_005111061.1	SDR family NAD(P)-dependent oxidoreductase	91.4	55.4	45.0
MGA_302	LOCUS_03010	sequence1:303378..304943(+)	partial			WP_013227752.1	AMP-binding protein	95.2	73.4	40.7
MGA_304	LOCUS_03030	sequence1:309969..310349(+)	frameshift		310289,310418	WP_015040424.1	DUF899 domain-containing protein	32.5	15.5	85.4
MGA_305	LOCUS_03040	sequence1:310289..310570(+)	frameshift		310289,310418,310500	WP_005086643.1	DUF899 domain-containing protein	97.8	36.7	46.2
MGA_323	LOCUS_03220	sequence1:329407..330003(-)	frameshift		329430	WP_010909018.1	L,D-transpeptidase	97.5	76.9	75.6
MGA_333	LOCUS_03320	sequence1:341675..342250(+)	frameshift		341667	WP_003899825.1	YoaK family protein	100.0	73.7	76.4
MGA_348	LOCUS_03470	sequence1:353691..354320(-)	partial			WP_176742110.1	TetR/AcrR family transcriptional regulator	68.9	68.8	28.5
MGA_357	LOCUS_03560	sequence1:362222..363292(+)	frameshift		362220	WP_003400938.1	cytochrome P450	97.8	78.9	75.9
MGA_366	LOCUS_03650	sequence1:369717..370067(+)	frameshift		369754,369540	WP_003897878.1	DNA starvation/stationary phase protection protein	88.8	56.3	76.7
MGA_370	LOCUS_03690	sequence1:373126..373785(+)	frameshift		373088	WP_003400961.1	TetR/AcrR family transcriptional regulator	95.0	74.3	66.8
MGA_376	LOCUS_03750	sequence1:379133..380668(-)	partial			WP_010950605.1	PPE family protein	89.4	67.9	46.9
MGA_377	LOCUS_03760	sequence1:380551..380850(-)	frameshift		380589	WP_010950354.1	PE-PPE domain-containing protein	87.9	18.6	51.7
MGA_378	LOCUS_03770	sequence1:380850..382667(-)	partial			WP_010950605.1	PPE family protein	77.9	69.3	42.6
MGA_390	LOCUS_03890	sequence1:394428..395174(+)	frameshift		394402	WP_011730637.1	diacylglycerol kinase	97.2	67.6	66.1
MGA_409	LOCUS_04080	sequence1:411434..412333(+)	partial			WP_010210634.1	mandelate racemase family protein	94.0	72.4	45.3
MGA_425	LOCUS_04240	sequence1:429357..430208(+)	partial			WP_162618345.1	Mce protein	57.6	74.4	65.0
MGA_428	LOCUS_04270	sequence1:431724..432623(+)	partial			WP_045843938.1	hypothetical protein	54.8	72.9	60.4
MGA_431	LOCUS_04300	sequence1:434537..435193(-)	frameshift		435194	WP_003899846.1	YhgE/Pip domain-containing protein	80.7	38.9	73.3
MGA_432	LOCUS_04310	sequence1:435190..436017(-)	frameshift		435474,435197	WP_003899846.1	YhgE/Pip domain-containing protein	67.3	40.9	63.2
MGA_446	LOCUS_04450	sequence1:450242..451234(+)	partial			WP_003908487.1	Ig-like domain-containing protein	76.4	71.6	83.0
MGA_452	LOCUS_04510	sequence1:458705..459169(+)	partial			WP_011726772.1	hemophore	63.6	50.8	63.3
MGA_455	LOCUS_04540	sequence1:461743..463044(-)	frameshift		463160,463033	WP_003899855.1	trehalose monomycolate RND transporter MmpL3	99.1	42.6	60.9
MGA_456	LOCUS_04550	sequence1:462978..464678(-)	frameshift		463163,463039	WP_010908997.1	MMPL family transporter	90.3	53.5	80.8
MGA_477	LOCUS_04760	sequence1:493833..496400(-)	frameshift		494065,494146,493861,493862,494683,494046,493855	WP_099318959.1	PE family protein	14.5	27.1	49.2
MGA_480	LOCUS_04790	sequence1:497877..498971(+)	frameshift		498834,498788	WP_011726791.1	amidohydrolase family protein	83.8	70.0	57.8
MGA_481	LOCUS_04800	sequence1:499010..499180(+)	frameshift		498834,498791	WP_011726791.1	amidohydrolase family protein	94.6	12.5	52.8
MGA_488	LOCUS_04870	sequence1:506239..508047(+)	partial			WP_003911027.1	PE family protein	17.9	24.6	46.3
MGA_489	LOCUS_04880	sequence1:508099..509565(-)	internal_stop_codon	508099..508101(-)		WP_010886067.1	PE family protein	25.4	23.2	46.8
MGA_504	LOCUS_05030	sequence1:526727..528682(-)	partial			WP_010886110.1	serine/threonine protein kinase PknH	44.1	47.3	54.4
MGA_510	LOCUS_05090	sequence1:535667..536482(+)	frameshift		536311	WP_003903691.1	HNH endonuclease signature motif containing protein	79.0	47.4	53.5
MGA_511	LOCUS_05100	sequence1:536482..537030(+)	frameshift		536311	WP_003903691.1	HNH endonuclease signature motif containing protein	98.9	39.4	65.0
MGA_512	LOCUS_05110	sequence1:537077..538474(+)	partial			WP_003900090.1	PPE family protein	64.9	59.1	47.7
MGA_529	LOCUS_05280	sequence1:558566..559000(-)	frameshift		559262	WP_003401322.1	fumarate reductase/succinate dehydrogenase flavoprotein subunit	99.3	23.4	72.2
MGA_530	LOCUS_05290	sequence1:559000..560484(-)	frameshift		559467,559268	WP_003401322.1	fumarate reductase/succinate dehydrogenase flavoprotein subunit	68.8	52.6	94.4
MGA_539	LOCUS_05380	sequence1:568444..568926(+)	frameshift		568836	WP_010886067.1	PE family protein	80.6	25.9	58.9
MGA_554	LOCUS_05530	sequence1:583715..584002(+)	frameshift		583650	WP_003401399.1	VOC family protein	96.8	47.7	83.7
MGA_560	LOCUS_05590	sequence1:588970..590241(+)	frameshift		590019	WP_005113275.1	PPE family protein	61.0	51.4	37.5
MGA_562	LOCUS_05610	sequence1:592509..593792(+)	frameshift		593744	WP_003401472.1	type VII secretion system ESX-3 subunit EccB3	96.5	76.8	70.0
MGA_563	LOCUS_05620	sequence1:593762..594124(+)	frameshift		593744	WP_003401472.1	type VII secretion system ESX-3 subunit EccB3	95.8	20.3	69.6
MGA_565	LOCUS_05640	sequence1:598137..598445(+)	partial			WP_003401485.1	type VII secretion system ESX-3 target PE5	70.6	70.6	69.4
MGA_577	LOCUS_05760	sequence1:610521..611099(+)	partial			WP_003401594.1	phosphatase PAP2 family protein	75.0	60.5	43.1
MGA_589	LOCUS_05880	sequence1:622449..623135(+)	partial			WP_011144354.1	class I SAM-dependent methyltransferase	58.8	47.3	36.8
MGA_598	LOCUS_05970	sequence1:630556..631818(+)	partial			WP_010967670.1	nitric oxide reductase activation protein NorD	67.1	44.8	32.5
MGA_601	LOCUS_06000	sequence1:634670..634966(+)	frameshift		634933	WP_225580817.1	IS3 family transposase	89.8	23.6	44.0
MGA_602	LOCUS_06010	sequence1:634963..635829(+)	frameshift,internal_stop_codon	634964..634966(+)	634990	WP_164929392.1	IS3-like element ISGvi5 family transposase	92.0	66.6	40.0
MGA_605	LOCUS_06040	sequence1:637965..638696(-)	frameshift		638712,638833,638775	WP_011727513.1	IS1634-like element ISMsm6 family transposase	100.0	44.4	74.5
MGA_607	LOCUS_06060	sequence1:640086..640514(-)	frameshift		640555	WP_011970281.1	tyrosine-type recombinase/integrase	48.6	22.1	63.8
MGA_608	LOCUS_06070	sequence1:640484..641056(-)	frameshift		640552	WP_010967848.1	tyrosine-type recombinase/integrase	80.5	50.0	35.3
MGA_609	LOCUS_06080	sequence1:641141..642025(-)	partial			WP_149764772.1	site-specific integrase	96.9	68.5	34.7
MGA_610	LOCUS_06090	sequence1:642095..642373(-)	frameshift		642465,642404	WP_011727513.1	IS1634-like element ISMsm6 family transposase	73.9	13.4	52.1
MGA_614	LOCUS_06130	sequence1:645646..647220(+)	frameshift,internal_stop_codon	647105..647107(+),647135..647137(+)	645705,647001,646114,647359	WP_011727115.1	hypothetical protein	84.5	75.6	32.9
MGA_615	LOCUS_06140	sequence1:647630..649030(+)	frameshift		647359	WP_011727115.1	hypothetical protein	70.0	59.8	44.0
MGA_618	LOCUS_06170	sequence1:652209..652547(-)	frameshift		652578	WP_011730848.1	TetR/AcrR family transcriptional regulator	59.8	32.4	53.7
MGA_620	LOCUS_06190	sequence1:652950..653168(-)	partial			WP_011728056.1	NAD(P)-dependent alcohol dehydrogenase	62.5	13.2	75.6
MGA_632	LOCUS_06310	sequence1:664144..664545(+)	frameshift		664109	WP_003401662.1	maleylpyruvate isomerase family mycothiol-dependent enzyme	100.0	51.0	65.4
MGA_634	LOCUS_06330	sequence1:664953..665492(+)	frameshift		665427,665333	WP_010908937.1	glucose-1-phosphate thymidylyltransferase RfbA	77.7	48.3	79.1
MGA_635	LOCUS_06340	sequence1:665489..665821(+)	frameshift		665427,665339	WP_003401670.1	glucose-1-phosphate thymidylyltransferase RfbA	100.0	38.2	85.5
MGA_638	LOCUS_06370	sequence1:668384..671551(-)	partial			WP_010908935.1	heterodisulfide reductase-related iron-sulfur binding cluster	69.9	83.5	81.6
MGA_643	LOCUS_06420	sequence1:677238..678287(+)	frameshift		677891	WP_003901837.1	isoniazid-induced protein IniB	31.2	23.8	57.9
MGA_649	LOCUS_06480	sequence1:682547..683527(+)	frameshift		683332,683519	WP_003401747.1	isoniazid-induced dynamin-like GTPase IniC	80.4	53.1	83.2
MGA_654	LOCUS_06530	sequence1:688121..688924(-)	partial			WP_003401751.1	hypothetical protein	42.3	60.8	81.4
MGA_657	LOCUS_06560	sequence1:690453..691397(+)	partial			WP_043078436.1	DUF4185 domain-containing protein	88.5	72.9	39.1
MGA_658	LOCUS_06570	sequence1:691378..691629(-)	frameshift		691633,691802	WP_011731358.1	enoyl-CoA hydratase-related protein	94.0	35.8	71.8
MGA_659	LOCUS_06580	sequence1:691575..692042(-)	frameshift		691802,691636	WP_010908934.1	enoyl-CoA hydratase-related protein	51.0	36.1	72.2
MGA_668	LOCUS_06670	sequence1:699563..700096(-)	frameshift		700164	WP_003401910.1	FAD-binding oxidoreductase	100.0	45.4	89.8
MGA_669	LOCUS_06680	sequence1:699979..700719(-)	frameshift		700164	WP_003401910.1	FAD-binding oxidoreductase	79.7	51.3	66.5
MGA_687	LOCUS_06860	sequence1:717034..717963(+)	frameshift		718168,717789	WP_003898427.1	phosphoribosylglycinamide formyltransferase 2	65.0	52.3	51.8
MGA_688	LOCUS_06870	sequence1:717911..718171(+)	frameshift		718168,717789	WP_003898427.1	phosphoribosylglycinamide formyltransferase 2	100.0	20.5	83.7
MGA_689	LOCUS_06880	sequence1:718168..718404(+)	frameshift		718168	WP_010950394.1	phosphoribosylglycinamide formyltransferase 2	96.2	15.3	52.0
MGA_694	LOCUS_06930	sequence1:723588..724361(-)	frameshift		724458	WP_001062663.1	pyruvate oxidase	70.0	30.9	29.7
MGA_695	LOCUS_06940	sequence1:724250..726523(-)	partial			WP_000467257.1	pyruvate oxidase	20.7	28.1	40.9
MGA_710	LOCUS_07090	sequence1:741374..743173(+)	partial			WP_011030729.1	LuxR family transcriptional regulator	85.1	54.9	32.1
MGA_711	LOCUS_07100	sequence1:743446..744141(+)	frameshift		743318	WP_003977982.1	LuxR family transcriptional regulator	49.8	13.5	38.3
MGA_721	LOCUS_07200	sequence1:757965..758324(+)	frameshift		757939	WP_014876872.1	NUDIX hydrolase	97.5	69.5	80.2
MGA_729	LOCUS_07280	sequence1:763561..763884(+)	partial			WP_013228394.1	CD225/dispanin family protein	77.6	72.2	41.0
MGA_735	LOCUS_07340	sequence1:768985..769389(+)	partial			WP_011730291.1	DUF4190 domain-containing protein	61.2	53.7	43.9
MGA_743	LOCUS_07420	sequence1:774789..776405(+)	partial			WP_013227688.1	SpoIIE family protein phosphatase	80.3	31.4	35.7
MGA_748	LOCUS_07470	sequence1:778289..778909(-)	partial			WP_003402179.1	hypothetical protein	81.1	55.3	58.1
MGA_755	LOCUS_07540	sequence1:783269..783949(-)	frameshift		784008,783948	WP_003402206.1	AAA family ATPase	97.3	30.2	91.8
MGA_756	LOCUS_07550	sequence1:783877..785439(-)	frameshift		783948	WP_003402206.1	AAA family ATPase	95.4	67.9	78.1
MGA_767	LOCUS_07660	sequence1:795618..796868(-)	frameshift		796953	WP_011727265.1	amidohydrolase family protein	99.3	71.9	72.2
MGA_776	LOCUS_07750	sequence1:805368..805964(+)	frameshift		805880	WP_003407779.1	MMPL family transporter	80.8	16.5	60.0
MGA_777	LOCUS_07760	sequence1:805978..808305(+)	frameshift		805880	WP_003407779.1	MMPL family transporter	97.9	78.5	64.8
MGA_788	LOCUS_07870	sequence1:818194..818355(+)	internal_stop_codon	818182..818184(+)		WP_003402297.1	putative holin	100.0	67.1	69.8
MGA_792	LOCUS_07910	sequence1:821112..821411(+)	partial			WP_003402304.1	hypothetical protein	73.7	75.3	38.4
MGA_797	LOCUS_07960	sequence1:824906..825904(+)	frameshift		824925,824711	WP_003892337.1	isocitrate lyase	97.9	75.9	94.8
MGA_799	LOCUS_07980	sequence1:827003..828457(+)	partial			WP_003900153.1	SAM-dependent methyltransferase UmaA	46.1	78.0	83.0
MGA_811	LOCUS_08100	sequence1:837917..838312(+)	frameshift		837867	WP_003402354.1	UDP-N-acetylmuramate dehydrogenase	100.0	36.9	82.4
MGA_813	LOCUS_08120	sequence1:839728..840177(-)	frameshift		840181	WP_003402359.1	SDR family oxidoreductase	97.3	57.8	94.5
MGA_814	LOCUS_08130	sequence1:840065..840454(-)	frameshift		840181	WP_011727295.1	SDR family oxidoreductase	66.7	34.5	68.6
MGA_841	LOCUS_08400	sequence1:866034..867284(+)	frameshift		867128	WP_003900163.1	uroporphyrinogen-III synthase	87.0	66.2	81.9
MGA_842	LOCUS_08410	sequence1:867233..867697(+)	frameshift		867128	WP_003900163.1	uroporphyrinogen-III synthase	100.0	27.3	94.2
MGA_845	LOCUS_08440	sequence1:869350..869595(+)	partial			WP_003402715.1	hypothetical protein	91.4	74.7	60.8
MGA_861	LOCUS_08600	sequence1:884337..884696(+)	frameshift		884323	WP_003402847.1	cytochrome c biogenesis CcdA family protein	100.0	45.9	86.6
MGA_871	LOCUS_08700	sequence1:894084..896270(+)	partial			WP_003900169.1	hypothetical protein	29.5	37.4	43.4
MGA_879	LOCUS_08780	sequence1:902258..902569(+)	frameshift,internal_stop_codon	902751..902753(+),902721..902723(+)	902617,902554,902795	WP_003910785.1	DUF222 domain-containing protein	94.2	43.7	50.5
MGA_881	LOCUS_08800	sequence1:902818..903576(+)	frameshift		902554,902803,902626	WP_003898743.1	HNH endonuclease signature motif containing protein	93.3	51.5	57.0
MGA_883	LOCUS_08820	sequence1:904495..905178(-)	partial			WP_010908794.1	hypothetical protein	66.5	73.9	53.0
MGA_891	LOCUS_08900	sequence1:913756..914256(-)	partial			WP_003407152.1	membrane protein	80.1	60.0	52.6
MGA_893	LOCUS_08920	sequence1:915849..916784(+)	frameshift		916691	WP_003402927.1	2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase	90.4	50.4	85.4
MGA_894	LOCUS_08930	sequence1:916705..917496(+)	frameshift		916691	WP_003402927.1	2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase	100.0	48.9	84.5
MGA_901	LOCUS_09000	sequence1:923744..924850(-)	partial			WP_013224304.1	MCE family protein	76.4	71.3	34.0
MGA_914	LOCUS_09130	sequence1:937828..939042(-)	frameshift		939076	WP_010908805.1	SulP family inorganic anion transporter	100.0	81.9	66.7
MGA_936	LOCUS_09350	sequence1:964945..965370(+)	frameshift,internal_stop_codon	964946..964948(+)	964984	WP_013525152.1	MaoC family dehydratase N-terminal domain-containing protein	65.2	31.8	41.3
MGA_945	LOCUS_09440	sequence1:975650..977731(+)	frameshift		975570	WP_010950416.1	GH92 family glycosyl hydrolase	99.0	78.6	71.8
MGA_951	LOCUS_09500	sequence1:986310..986585(-)	internal_stop_codon	986595..986597(-)		WP_011727557.1	HNH endonuclease domain-containing protein	93.4	23.7	75.3
MGA_952	LOCUS_09510	sequence1:986595..987407(-)	internal_stop_codon	986595..986597(-)		WP_011727557.1	HNH endonuclease domain-containing protein	97.8	73.5	77.3
MGA_955	LOCUS_09540	sequence1:992707..993042(-)	frameshift		993097	WP_014877040.1	exodeoxyribonuclease V subunit gamma	92.8	9.5	77.7
MGA_963	LOCUS_09620	sequence1:1001005..1001223(+)	partial			WP_003403268.1	type II toxin-antitoxin system VapB family antitoxin	86.1	73.5	58.1
MGA_1002	LOCUS_10010	sequence1:1043751..1044047(+)	frameshift		1043677,1043589	WP_003892787.1	30S ribosomal protein S7	100.0	62.8	96.9
MGA_1003	LOCUS_10020	sequence1:1044118..1045866(+)	frameshift		1046056,1045812	WP_003898554.1	elongation factor G	97.3	80.7	91.2
MGA_1004	LOCUS_10030	sequence1:1046080..1046226(+)	frameshift		1046056,1045815	WP_005055595.1	elongation factor G	100.0	6.8	97.9
MGA_1008	LOCUS_10070	sequence1:1049773..1050066(+)	frameshift		1049971,1049767	WP_003901000.1	FAD/NAD(P)-binding oxidoreductase	70.1	16.7	76.5
MGA_1009	LOCUS_10080	sequence1:1049997..1050797(+)	frameshift		1049971,1049767	WP_003901000.1	FAD/NAD(P)-binding oxidoreductase	99.6	65.3	83.0
MGA_1017	LOCUS_10160	sequence1:1055985..1056767(+)	frameshift		1056746	WP_003898557.1	mycofactocin biosynthesis FMN-dependent deaminase MftD	100.0	66.7	83.7
MGA_1018	LOCUS_10170	sequence1:1056754..1057161(+)	frameshift		1056749	WP_014877068.1	mycofactocin biosynthesis FMN-dependent deaminase MftD	99.3	33.8	91.0
MGA_1022	LOCUS_10210	sequence1:1060967..1061689(-)	partial			WP_009939865.1	PE family protein	49.2	22.4	52.1
MGA_1023	LOCUS_10220	sequence1:1061833..1062558(-)	frameshift		1062562	WP_005080481.1	cytochrome P450	100.0	57.7	73.9
MGA_1024	LOCUS_10230	sequence1:1062524..1063102(-)	frameshift		1062565	WP_011727666.1	cytochrome P450	90.1	41.6	69.4
MGA_1025	LOCUS_10240	sequence1:1063138..1064535(-)	partial			WP_010886090.1	PE family protein	28.6	15.1	50.4
MGA_1035	LOCUS_10340	sequence1:1070150..1070350(+)	frameshift		1070118	WP_003403594.1	50S ribosomal protein L29	89.4	76.6	84.7
MGA_1036	LOCUS_10350	sequence1:1070498..1070716(+)	frameshift		1070441	WP_162618335.1	30S ribosomal protein S17	100.0	57.1	93.1
MGA_1052	LOCUS_10510	sequence1:1084294..1084797(+)	frameshift		1084121	WP_003403680.1	30S ribosomal protein S5	88.6	67.3	93.2
MGA_1060	LOCUS_10590	sequence1:1090896..1091789(+)	partial			WP_009897167.1	AraC family transcriptional regulator	33.3	33.2	33.3
MGA_1063	LOCUS_10620	sequence1:1093553..1093999(-)	frameshift		1094130,1094006	WP_003403698.1	D-3-phosphoglycerate dehydrogenase SerA	100.0	45.4	81.1
MGA_1077	LOCUS_10760	sequence1:1107127..1107468(+)	frameshift		1107450	WP_003416051.1	HNH endonuclease signature motif containing protein	90.3	24.1	59.8
MGA_1078	LOCUS_10770	sequence1:1107465..1108406(+)	frameshift		1107450	WP_009936020.1	HNH endonuclease signature motif containing protein	100.0	66.5	67.1
MGA_1079	LOCUS_10780	sequence1:1108408..1108761(-)	partial			WP_010908650.1	lipoprotein LpqH	95.7	70.2	71.7
MGA_1088	LOCUS_10870	sequence1:1113954..1114613(+)	partial			WP_003418354.1	30S ribosomal protein S4	74.4	81.1	89.6
MGA_1092	LOCUS_10910	sequence1:1117209..1117415(-)	frameshift		1117413,1117654	WP_003411863.1	cutinase family protein	98.5	34.3	49.4
MGA_1093	LOCUS_10920	sequence1:1117858..1118721(-)	frameshift		1117654	WP_003418336.1	cutinase family protein	76.0	81.3	68.8
MGA_1096	LOCUS_10950	sequence1:1122957..1125983(+)	frameshift		1125755,1126077	WP_003912232.1	type VII secretion system ESX-4 FtsK/SpoIIIE family ATPase EccC4	95.2	82.4	55.9
MGA_1097	LOCUS_10960	sequence1:1126125..1126451(+)	frameshift		1126077	WP_003912232.1	type VII secretion system ESX-4 FtsK/SpoIIIE family ATPase EccC4	99.1	8.6	65.4
MGA_1098	LOCUS_10970	sequence1:1126448..1127110(+)	frameshift		1127035	WP_003418324.1	type VII secretion-associated protein	89.1	51.0	51.9
MGA_1099	LOCUS_10980	sequence1:1127071..1127631(+)	frameshift		1127038	WP_003418324.1	type VII secretion-associated protein	87.6	39.9	61.3
MGA_1116	LOCUS_11150	sequence1:1142549..1143439(+)	frameshift		1143133	WP_204250368.1	alpha/beta hydrolase	61.5	50.0	72.0
MGA_1117	LOCUS_11160	sequence1:1143348..1143656(+)	partial			WP_010907692.1	alpha/beta hydrolase	84.3	25.8	73.3
MGA_1121	LOCUS_11200	sequence1:1146246..1147100(-)	frameshift,internal_stop_codon	1146102..1146104(-)	1145984,1145987,1145988,1145989,1145990,1147271,1147140,1147274,1146000,1147156,1147286,1146137,1146138,1146139,1146156,1146159,1146160,1146289,1146163,1146164,1146165,1146293,1146295,1146168,1146297,1146298,1146296,1146299,1146301,1146166,1146304,1146307,1146180,1146056,1146081,1146082,1146083,1146084,1146085,1146086,1146087,1146089,1147114,1147113,1147117,1147120,1145980,1145981	WP_014000452.1	PE family protein PE_PGRS12, long form	16.5	5.1	55.3
MGA_1122	LOCUS_11210	sequence1:1147427..1148041(-)	frameshift		1147453,1147285	WP_010886084.1	PE family protein	87.3	22.6	47.8
MGA_1126	LOCUS_11250	sequence1:1152058..1154013(+)	frameshift		1152053	WP_011726759.1	adenylate/guanylate cyclase domain-containing protein	99.8	61.9	51.5
MGA_1127	LOCUS_11260	sequence1:1154010..1154636(+)	frameshift		1154627,1154637	WP_010907694.1	bifunctional tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB/ribosomal protein alanine acetyltransferase RimI	93.3	54.0	74.7
MGA_1137	LOCUS_11360	sequence1:1162528..1163157(-)	partial			WP_038966328.1	TetR/AcrR family transcriptional regulator	74.2	74.9	30.1
MGA_1141	LOCUS_11400	sequence1:1166031..1166339(+)	partial			WP_003409913.1	type II toxin-antitoxin system VapC family toxin	92.2	69.6	59.6
MGA_1142	LOCUS_11410	sequence1:1166347..1167354(+)	frameshift,internal_stop_codon	1167352..1167354(+)	1167363	WP_010884002.1	alpha/beta hydrolase fold domain-containing protein	89.9	36.7	42.5
MGA_1146	LOCUS_11450	sequence1:1169724..1170644(+)	partial			WP_003418011.1	anti-sigma D factor RsdA	68.3	67.9	67.0
MGA_1148	LOCUS_11470	sequence1:1171239..1172660(+)	frameshift		1172186,1172493	WP_003900682.1	IMP dehydrogenase	66.8	59.7	91.1
MGA_1149	LOCUS_11480	sequence1:1172630..1172830(+)	frameshift		1172496	WP_003900682.1	IMP dehydrogenase	100.0	12.5	93.9
MGA_1165	LOCUS_11640	sequence1:1187316..1188260(+)	frameshift		1188170	WP_003417952.1	glutamine-hydrolyzing GMP synthase	92.0	55.0	84.4
MGA_1166	LOCUS_11650	sequence1:1188160..1188846(+)	frameshift		1188173	WP_003417952.1	glutamine-hydrolyzing GMP synthase	98.2	42.7	92.9
MGA_1169	LOCUS_11680	sequence1:1191292..1191666(+)	frameshift		1191257,1191251	WP_003900043.1	hypothetical protein	93.5	56.9	62.1
MGA_1183	LOCUS_11820	sequence1:1202420..1203706(+)	partial			WP_011031729.1	HAMP domain-containing sensor histidine kinase	53.3	45.6	34.6
MGA_1187	LOCUS_11860	sequence1:1207372..1208304(-)	frameshift		1208402	WP_003417889.1	diacyglycerol O-acyltransferase	98.4	69.3	48.6
MGA_1189	LOCUS_11880	sequence1:1211788..1212201(+)	frameshift		1211752	WP_003908228.1	error-prone DNA polymerase DnaE2	100.0	12.7	88.3
MGA_1220	LOCUS_12190	sequence1:1241167..1241535(-)	partial			WP_015775835.1	DoxX family protein	75.4	73.4	43.5
MGA_1223	LOCUS_12220	sequence1:1243125..1244333(-)	frameshift		1243376,1243358	WP_010886161.1	sugar porter family MFS transporter	100.0	79.7	61.7
MGA_1226	LOCUS_12250	sequence1:1246409..1247929(+)	frameshift		1247920	WP_013223680.1	hypothetical protein	67.0	23.3	30.7
MGA_1227	LOCUS_12260	sequence1:1247904..1250660(+)	partial			WP_011141963.1	NB-ARC domain-containing protein	60.0	44.2	35.8
MGA_1229	LOCUS_12280	sequence1:1252720..1253262(+)	partial			WP_220096343.1	DUF4190 domain-containing protein	37.8	26.1	39.7
MGA_1242	LOCUS_12410	sequence1:1267598..1267903(-)	frameshift,internal_stop_codon	1267598..1267600(-)	1267976	WP_003905037.1	IS110 family transposase	99.0	17.5	82.0
MGA_1247	LOCUS_12460	sequence1:1270777..1272483(-)	partial			WP_010886091.1	PE family protein	19.9	17.3	46.9
MGA_1253	LOCUS_12520	sequence1:1276678..1277892(+)	partial			WP_029104120.1	hypothetical protein	71.0	81.5	35.8
MGA_1254	LOCUS_12530	sequence1:1277886..1278188(+)	frameshift		1278379,1277868,1278078	WP_003900016.1	thymidine phosphorylase	64.0	15.0	87.5
MGA_1255	LOCUS_12540	sequence1:1278082..1278387(+)	frameshift		1278379,1277868,1278078	WP_003900016.1	thymidine phosphorylase	98.0	23.2	91.9
MGA_1256	LOCUS_12550	sequence1:1278423..1279043(+)	frameshift		1278378	WP_003900016.1	thymidine phosphorylase	99.0	47.3	80.9
MGA_1261	LOCUS_12600	sequence1:1282199..1283524(-)	partial			WP_010907884.1	hypothetical protein	44.7	46.6	83.2
MGA_1271	LOCUS_12700	sequence1:1292990..1293847(+)	frameshift,internal_stop_codon	1293845..1293847(+)	1293898,1292955	WP_009936266.1	NAD(P)H-quinone dehydrogenase	100.0	57.8	89.1
MGA_1275	LOCUS_12740	sequence1:1298167..1298754(-)	partial			WP_013227398.1	DUF5994 family protein	59.5	74.4	44.0
MGA_1279	LOCUS_12780	sequence1:1302490..1302984(+)	frameshift		1302981	WP_010908715.1	phosphate ABC transporter substrate-binding protein PstS	86.6	38.5	58.0
MGA_1280	LOCUS_12790	sequence1:1303064..1303654(+)	frameshift		1302981	WP_010908715.1	phosphate ABC transporter substrate-binding protein PstS	99.5	52.8	68.2
MGA_1289	LOCUS_12880	sequence1:1314314..1314709(-)	partial			WP_011727905.1	STAS domain-containing protein	70.2	64.8	44.6
MGA_1292	LOCUS_12910	sequence1:1317180..1317941(-)	frameshift		1318054	WP_003417149.1	sulfurtransferase	99.6	84.8	87.7
MGA_1294	LOCUS_12930	sequence1:1318815..1319042(-)	partial			WP_010886160.1	acyl-CoA carboxylase subunit epsilon	100.0	42.9	80.3
MGA_1295	LOCUS_12940	sequence1:1319075..1319251(-)	frameshift		1319339	WP_010950861.1	acyl-CoA carboxylase subunit beta	100.0	10.6	94.8
MGA_1296	LOCUS_12950	sequence1:1319221..1320726(-)	frameshift		1319342,1319550	WP_010950861.1	acyl-CoA carboxylase subunit beta	78.4	71.5	90.1
MGA_1300	LOCUS_12990	sequence1:1323798..1324400(-)	frameshift		1324513	WP_003899998.1	GtrA family protein	99.5	74.6	83.3
MGA_1314	LOCUS_13130	sequence1:1340515..1341639(-)	frameshift		1341652,1341764	WP_003417107.1	phosphotransferase Lcp1	99.5	75.3	81.6
MGA_1319	LOCUS_13180	sequence1:1345485..1345751(-)	frameshift		1345806	WP_010907909.1	class I SAM-dependent methyltransferase	88.6	14.1	75.6
MGA_1320	LOCUS_13190	sequence1:1346052..1347065(-)	frameshift		1345808,1346132	WP_003417095.1	class I SAM-dependent methyltransferase	92.9	57.1	70.6
MGA_1334	LOCUS_13330	sequence1:1360670..1361062(+)	frameshift		1360644,1360990	WP_003417039.1	adenosylhomocysteinase	79.2	21.2	87.6
MGA_1335	LOCUS_13340	sequence1:1361034..1361945(+)	frameshift		1360990	WP_010950857.1	adenosylhomocysteinase	100.0	61.2	91.4
MGA_1338	LOCUS_13370	sequence1:1363990..1365246(+)	frameshift		1363928	WP_003416988.1	two-component system sensor histidine kinase MtrB	100.0	74.3	87.8
MGA_1348	LOCUS_13470	sequence1:1372303..1373727(-)	partial			WP_235624058.1	hypothetical protein	75.3	51.6	23.6
MGA_1365	LOCUS_13640	sequence1:1390730..1391530(-)	frameshift		1391546,1391254	WP_003894393.1	thiolase family protein	35.3	23.9	92.6
MGA_1372	LOCUS_13710	sequence1:1397533..1398777(+)	partial			WP_005809350.1	alkyl/aryl-sulfatase	56.8	53.5	31.0
MGA_1373	LOCUS_13720	sequence1:1399003..1399521(+)	frameshift		1399058,1399046	WP_038967020.1	SDR family oxidoreductase	90.1	59.4	40.0
MGA_1379	LOCUS_13780	sequence1:1404163..1404786(+)	frameshift		1404856,1404777	WP_003893296.1	sigma-70 family RNA polymerase sigma factor SigH	72.9	70.2	97.4
MGA_1394	LOCUS_13930	sequence1:1416149..1416397(-)	frameshift		1416435	WP_003416868.1	MmpS family transport accessory protein	100.0	44.1	79.3
MGA_1402	LOCUS_14010	sequence1:1421809..1422138(-)	internal_stop_codon	1422199..1422201(-)		WP_003416843.1	alpha/beta hydrolase	98.2	47.8	71.0
MGA_1403	LOCUS_14020	sequence1:1422199..1422588(-)	internal_stop_codon	1422199..1422201(-)		WP_014877251.1	alpha/beta hydrolase	96.1	47.1	62.4
MGA_1406	LOCUS_14050	sequence1:1426396..1426743(+)	frameshift		1426322	WP_003905015.1	ATP-dependent DNA helicase AdnA	97.4	10.6	77.7
MGA_1407	LOCUS_14060	sequence1:1426740..1429094(+)	frameshift		1429052	WP_003416833.1	ATP-dependent DNA helicase AdnB	97.8	69.6	75.5
MGA_1408	LOCUS_14070	sequence1:1429328..1430020(+)	frameshift		1429392,1429052,1429407	WP_003416833.1	ATP-dependent DNA helicase AdnB	88.7	18.4	73.5
MGA_1426	LOCUS_14250	sequence1:1448556..1449173(-)	partial			WP_010867602.1	dTMP kinase	71.2	75.1	40.9
MGA_1427	LOCUS_14260	sequence1:1449170..1450654(-)	partial			WP_010941535.1	B12-binding domain-containing radical SAM protein	77.5	65.5	27.3
MGA_1429	LOCUS_14280	sequence1:1451915..1452406(-)	partial			WP_003899955.1	XRE family transcriptional regulator	54.0	81.7	77.5
MGA_1431	LOCUS_14300	sequence1:1452802..1453917(-)	partial			WP_000675870.1	tyrosine-type recombinase/integrase	70.9	69.1	32.5
MGA_1436	LOCUS_14350	sequence1:1456677..1458356(+)	frameshift		1458302	WP_012256729.1	helicase-related protein	95.5	56.0	32.2
MGA_1437	LOCUS_14360	sequence1:1458361..1459539(+)	partial			WP_012256729.1	helicase-related protein	99.7	42.3	25.6
MGA_1445	LOCUS_14440	sequence1:1471627..1472856(+)	frameshift,internal_stop_codon	1472081..1472083(+)	1471512,1472032,1472095,1471623	WP_189327688.1	IS21 family transposase	46.5	33.8	40.2
MGA_1446	LOCUS_14450	sequence1:1472784..1473101(+)	frameshift		1472760	WP_011393564.1	ATP-binding protein	64.8	42.0	50.0
MGA_1447	LOCUS_14460	sequence1:1473327..1473746(+)	frameshift		1473265,1473243	WP_085976166.1	IS3 family transposase	100.0	36.2	52.5
MGA_1450	LOCUS_14490	sequence1:1475049..1476788(+)	partial			WP_011729600.1	tyrosine-type recombinase/integrase	68.0	52.2	29.4
MGA_1453	LOCUS_14520	sequence1:1478311..1478694(+)	partial			WP_011730273.1	TetR/AcrR family transcriptional regulator	74.8	47.7	36.5
MGA_1455	LOCUS_14540	sequence1:1479311..1484830(+)	partial			WP_010966317.1	AAA domain-containing protein	32.4	42.5	32.4
MGA_1457	LOCUS_14560	sequence1:1485376..1486044(+)	frameshift		1485960,1485356	WP_085976939.1	IS3 family transposase	87.4	51.2	84.8
MGA_1458	LOCUS_14570	sequence1:1485992..1486189(+)	frameshift		1485960	WP_085976170.1	IS3 family transposase	90.8	15.3	86.4
MGA_1466	LOCUS_14650	sequence1:1492900..1493475(+)	internal_stop_codon	1493473..1493475(+),1493503..1493505(+)		WP_011727561.1	DUF4194 domain-containing protein	100.0	79.6	79.1
MGA_1467	LOCUS_14660	sequence1:1493468..1495804(+)	partial			WP_011039227.1	ATP-binding protein	91.4	52.8	32.7
MGA_1468	LOCUS_14670	sequence1:1495747..1496853(+)	partial			WP_011039227.1	ATP-binding protein	78.3	21.4	30.8
MGA_1475	LOCUS_14740	sequence1:1502951..1503895(+)	frameshift		1504171,1503829	WP_164929092.1	ATP-binding protein	90.8	23.1	53.1
MGA_1476	LOCUS_14750	sequence1:1504223..1507060(+)	frameshift		1504170	WP_013227688.1	SpoIIE family protein phosphatase	99.9	68.8	54.2
MGA_1478	LOCUS_14770	sequence1:1507853..1508563(+)	frameshift		1508386	WP_003412335.1	sulfate ABC transporter substrate-binding protein	63.1	41.9	79.2
MGA_1479	LOCUS_14780	sequence1:1508448..1508891(+)	frameshift		1508386	WP_003412335.1	sulfate ABC transporter substrate-binding protein	100.0	41.3	78.9
MGA_1495	LOCUS_14940	sequence1:1523462..1524295(+)	partial			WP_011728655.1	SDR family NAD(P)-dependent oxidoreductase	80.9	71.2	34.8
MGA_1499	LOCUS_14980	sequence1:1527100..1527564(+)	frameshift		1527498	WP_003416588.1	MoxR family ATPase	92.9	44.7	84.6
MGA_1500	LOCUS_14990	sequence1:1527554..1528087(+)	frameshift		1527501	WP_010950843.1	MoxR family ATPase	97.2	53.8	86.6
MGA_1506	LOCUS_15050	sequence1:1537147..1537482(-)	frameshift		1537582	WP_003416460.1	NADH-quinone oxidoreductase subunit M	99.1	20.8	77.4
MGA_1507	LOCUS_15060	sequence1:1537380..1538723(-)	frameshift		1537820,1537582	WP_010950838.1	NADH-quinone oxidoreductase subunit M	65.8	57.5	75.2
MGA_1535	LOCUS_15340	sequence1:1563830..1565386(-)	partial			WP_003403850.1	phosphoglycerate mutase PE_PGRS11	34.6	28.6	45.8
MGA_1540	LOCUS_15390	sequence1:1568788..1569750(-)	frameshift		1569826	WP_003899936.1	acyl-CoA dehydrogenase family protein	100.0	79.8	91.6
MGA_1546	LOCUS_15450	sequence1:1574095..1574571(-)	frameshift,internal_stop_codon	1574095..1574097(-)	1574672,1574590	WP_015776827.1	cbb3-type cytochrome c oxidase subunit I	98.1	18.5	64.5
MGA_1547	LOCUS_15460	sequence1:1574583..1576421(-)	frameshift		1574681,1574593	WP_015776827.1	cbb3-type cytochrome c oxidase subunit I	95.1	69.5	63.9
MGA_1550	LOCUS_15490	sequence1:1578132..1579253(+)	frameshift		1579217	WP_003899933.1	two-component system sensor histidine kinase DevS	96.5	62.5	71.1
MGA_1551	LOCUS_15500	sequence1:1579246..1579860(+)	frameshift		1579217	WP_003899933.1	two-component system sensor histidine kinase DevS	100.0	34.8	75.1
MGA_1555	LOCUS_15540	sequence1:1582739..1582942(+)	partial			WP_005110112.1	hypothetical protein	73.1	72.1	53.1
MGA_1560	LOCUS_15590	sequence1:1588152..1588625(+)	partial			WP_003416124.1	hypothetical protein	43.3	46.9	68.1
MGA_1565	LOCUS_15640	sequence1:1591797..1592489(+)	frameshift		1592642,1592459	WP_011729051.1	hypothetical protein	94.8	68.1	69.3
MGA_1566	LOCUS_15650	sequence1:1592486..1592872(+)	frameshift		1592642,1592459	WP_011729051.1	hypothetical protein	41.4	16.6	56.6
MGA_1567	LOCUS_15660	sequence1:1594145..1594357(+)	frameshift		1594116,1594342	WP_141270575.1	ISL3-like element ISAar39 family transposase	94.3	15.1	77.3
MGA_1568	LOCUS_15670	sequence1:1594387..1594755(+)	frameshift		1594342	WP_012804326.1	ISL3 family transposase	97.5	27.5	57.5
MGA_1578	LOCUS_15770	sequence1:1602479..1602925(-)	partial			WP_003407378.1	esterase PE16	69.6	19.5	40.8
MGA_1585	LOCUS_15840	sequence1:1609550..1610272(-)	partial			WP_013225434.1	M15 family metallopeptidase	74.2	77.4	50.8
MGA_1587	LOCUS_15860	sequence1:1611664..1612521(-)	partial			WP_162618299.1	murein biosynthesis integral membrane protein MurJ	51.6	12.3	60.5
MGA_1588	LOCUS_15870	sequence1:1612455..1613282(-)	frameshift		1612832,1613325,1612550	WP_011730586.1	LpqN/LpqT family lipoprotein	56.0	24.8	62.3
MGA_1593	LOCUS_15920	sequence1:1616413..1617561(+)	frameshift		1616393	WP_011730815.1	aldehyde dehydrogenase family protein	97.9	77.0	42.3
MGA_1600	LOCUS_15990	sequence1:1623466..1624131(-)	frameshift		1624397,1624351	WP_010908667.1	thioester reductase domain-containing protein	96.8	15.2	54.8
MGA_1601	LOCUS_16000	sequence1:1624017..1627559(-)	frameshift		1624360,1624406	WP_010908667.1	thioester reductase domain-containing protein	88.6	77.2	56.2
MGA_1615	LOCUS_16140	sequence1:1638971..1639786(+)	partial			WP_003113890.1	3-hydroxyisobutyrate dehydrogenase	77.9	71.1	30.5
MGA_1619	LOCUS_16180	sequence1:1642970..1644676(-)	partial			WP_011144393.1	potassium channel protein	89.1	73.9	26.5
MGA_1620	LOCUS_16190	sequence1:1645050..1645520(+)	partial			WP_003418931.1	LppP/LprE family lipoprotein	90.4	65.0	41.2
MGA_1621	LOCUS_16200	sequence1:1645709..1646590(+)	partial			WP_062284982.1	peptidoglycan DD-metalloendopeptidase family protein	32.4	29.6	47.5
MGA_1628	LOCUS_16270	sequence1:1651566..1652201(-)	frameshift		1652208,1652410	WP_011727153.1	dihydrodipicolinate reductase	99.1	58.2	90.0
MGA_1629	LOCUS_16280	sequence1:1652083..1652394(-)	frameshift		1652208,1652410	WP_011727153.1	dihydrodipicolinate reductase	60.2	17.3	82.3
MGA_1633	LOCUS_16320	sequence1:1655776..1656339(-)	partial			WP_069456659.1	TetR/AcrR family transcriptional regulator	74.3	69.0	35.3
MGA_1647	LOCUS_16460	sequence1:1667115..1668644(-)	partial			WP_011338147.1	VWA domain-containing protein	56.2	48.1	32.2
MGA_1651	LOCUS_16500	sequence1:1670978..1671364(+)	frameshift		1670964	WP_003410095.1	HNH endonuclease signature motif containing protein	97.7	29.9	72.0
MGA_1652	LOCUS_16510	sequence1:1671485..1672816(+)	frameshift		1671479	WP_003903979.1	recombinase family protein	80.8	76.1	35.4
MGA_1662	LOCUS_16610	sequence1:1681319..1682152(+)	partial			WP_011389729.1	phenylacetate--CoA ligase	89.5	57.7	30.5
MGA_1663	LOCUS_16620	sequence1:1682477..1683079(-)	frameshift		1683098	WP_013224531.1	proline dehydrogenase family protein	98.0	63.4	56.1
MGA_1668	LOCUS_16670	sequence1:1688207..1689079(+)	partial			WP_164922335.1	type I polyketide synthase	72.1	7.3	26.9
MGA_1669	LOCUS_16680	sequence1:1689131..1689961(-)	partial			WP_028172953.1	class I SAM-dependent methyltransferase	52.2	53.7	35.6
MGA_1673	LOCUS_16720	sequence1:1695156..1696745(-)	frameshift		1696795,1696755	WP_003898435.1	RND transporter MmpL1	94.7	52.3	72.7
MGA_1674	LOCUS_16730	sequence1:1696727..1698034(-)	frameshift		1696798,1696758	WP_003898435.1	RND transporter MmpL1	94.9	43.2	67.4
MGA_1678	LOCUS_16770	sequence1:1699708..1700529(-)	frameshift		1700791	WP_005110612.1	ThiF family adenylyltransferase	100.0	46.0	84.6
MGA_1679	LOCUS_16780	sequence1:1700540..1701484(-)	frameshift		1700791	WP_005110612.1	ThiF family adenylyltransferase	73.6	39.3	84.5
MGA_1689	LOCUS_16880	sequence1:1708959..1710344(+)	frameshift		1710278	WP_005088755.1	AMP-binding protein	92.0	77.6	30.5
MGA_1691	LOCUS_16900	sequence1:1712058..1713902(-)	partial			WP_012289393.1	NAD-binding protein	34.2	52.8	26.3
MGA_1693	LOCUS_16920	sequence1:1715411..1716346(+)	partial			WP_011728601.1	LLM class F420-dependent oxidoreductase	73.0	74.7	36.7
MGA_1702	LOCUS_17010	sequence1:1723085..1724245(-)	frameshift		1724273,1724499	WP_003901535.1	sulfatase-like hydrolase/transferase	100.0	64.7	79.2
MGA_1710	LOCUS_17090	sequence1:1732430..1734331(-)	frameshift		1733242,1733199	WP_158841022.1	recombinase family protein	76.1	70.8	29.3
MGA_1718	LOCUS_17170	sequence1:1737824..1738777(+)	frameshift		1737681	WP_141270575.1	ISL3-like element ISAar39 family transposase	99.1	71.8	57.8
MGA_1721	LOCUS_17200	sequence1:1739548..1740042(-)	frameshift		1740161	WP_005082750.1	DUF1906 domain-containing protein	99.4	60.4	75.5
MGA_1728	LOCUS_17270	sequence1:1746802..1747050(+)	partial			WP_003976436.1	calcium homeostasis/redox stress adaptation protein	58.5	28.3	63.0
MGA_1739	LOCUS_17380	sequence1:1756573..1757136(+)	partial			WP_005076063.1	MspA family porin	96.3	74.6	38.3
MGA_1741	LOCUS_17400	sequence1:1758127..1759188(-)	frameshift		1758225,1758057,1759279	WP_011015077.1	Hsp70 family protein	89.0	63.0	40.6
MGA_1746	LOCUS_17450	sequence1:1766348..1766641(-)	partial			WP_013228942.1	OB-fold domain-containing protein	94.8	17.2	41.5
MGA_1747	LOCUS_17460	sequence1:1766872..1767978(+)	partial			WP_011730106.1	OB-fold domain-containing protein	92.1	59.7	44.2
MGA_1759	LOCUS_17580	sequence1:1775918..1776505(+)	partial			WP_003914457.1	class 1b ribonucleoside-diphosphate reductase subunit alpha	90.8	25.0	89.0
MGA_1760	LOCUS_17590	sequence1:1776697..1779312(+)	frameshift		1776448	WP_003914457.1	class 1b ribonucleoside-diphosphate reductase subunit alpha	61.8	74.2	96.1
MGA_1767	LOCUS_17660	sequence1:1785423..1785980(-)	partial			WP_005098582.1	restriction endonuclease	69.7	64.4	48.2
MGA_1807	LOCUS_18060	sequence1:1824655..1824981(-)	partial			WP_003978014.1	DUF2945 domain-containing protein	57.4	82.7	66.1
MGA_1817	LOCUS_18160	sequence1:1833660..1834040(+)	frameshift		1834034,1834220,1834165,1834119	WP_003900617.1	GNAT family N-acetyltransferase	99.2	43.4	74.4
MGA_1822	LOCUS_18210	sequence1:1838971..1839756(+)	frameshift		1838953,1838826	WP_003415909.1	tRNA 2-thiouridine(34) synthase MnmA	98.5	70.0	84.0
MGA_1830	LOCUS_18290	sequence1:1845486..1846325(+)	frameshift		1845463	WP_003415263.1	NAD-dependent DNA ligase LigA	94.6	38.2	85.6
MGA_1840	LOCUS_18390	sequence1:1858910..1859674(-)	internal_stop_codon	1858910..1858912(-)		WP_011728654.1	NAD(P)/FAD-dependent oxidoreductase	86.6	33.9	30.7
MGA_1846	LOCUS_18450	sequence1:1863766..1864419(+)	partial			WP_010908279.1	DUF4333 domain-containing protein	35.9	28.7	53.8
MGA_1860	LOCUS_18590	sequence1:1882074..1883288(-)	frameshift		1882634,1883378	WP_003415142.1	MFS transporter	52.0	47.2	69.0
MGA_1870	LOCUS_18690	sequence1:1893148..1893804(+)	partial			WP_003415107.1	DNA-binding protein HupB	49.5	50.5	90.7
MGA_1874	LOCUS_18730	sequence1:1898171..1898959(+)	frameshift		1898160	WP_041323875.1	NAD(P)H-dependent glycerol-3-phosphate dehydrogenase	100.0	75.6	80.3
MGA_1875	LOCUS_18740	sequence1:1899028..1899816(+)	frameshift		1899961,1899780	WP_003912011.1	D-alanine--D-alanine ligase DdlA	93.9	66.0	85.0
MGA_1876	LOCUS_18750	sequence1:1899794..1900000(+)	frameshift		1899961,1899780	WP_010950808.1	D-alanine--D-alanine ligase DdlA	83.8	15.4	87.7
MGA_1877	LOCUS_18760	sequence1:1899967..1900140(+)	frameshift		1899961,1899783	WP_010950808.1	D-alanine--D-alanine ligase DdlA	98.2	15.1	94.6
MGA_1889	LOCUS_18880	sequence1:1909001..1909648(+)	frameshift		1909630,1909510	WP_011089805.1	alpha/beta hydrolase	77.2	51.1	40.0
MGA_1891	LOCUS_18900	sequence1:1910602..1910976(+)	partial			WP_024265642.1	MOSC domain-containing protein	88.7	43.5	44.5
MGA_1897	LOCUS_18960	sequence1:1915316..1915552(+)	frameshift,internal_stop_codon	1915550..1915552(+)	1915570,1915651,1915621	WP_013223540.1	nuclear transport factor 2 family protein	94.9	48.7	73.0
MGA_1898	LOCUS_18970	sequence1:1915852..1916367(+)	frameshift		1916310	WP_003891449.1	haloacid dehalogenase type II	92.4	69.5	60.1
MGA_1899	LOCUS_18980	sequence1:1916367..1916555(+)	frameshift		1916316	WP_003891449.1	haloacid dehalogenase type II	83.9	23.0	59.6
MGA_1900	LOCUS_18990	sequence1:1916783..1917277(-)	frameshift		1917420	WP_003419799.1	L-histidine N(alpha)-methyltransferase	100.0	51.1	69.5
MGA_1901	LOCUS_19000	sequence1:1917379..1917615(-)	frameshift		1917419,1917653	WP_003419799.1	L-histidine N(alpha)-methyltransferase	75.6	18.4	72.9
MGA_1902	LOCUS_19010	sequence1:1917913..1918239(-)	frameshift,internal_stop_codon	1917994..1917996(-)	1918489,1917867,1918300,1918069	WP_011731159.1	ergothioneine biosynthesis glutamate--cysteine ligase EgtA	50.9	13.0	83.6
MGA_1903	LOCUS_19020	sequence1:1918651..1919058(-)	frameshift		1918656,1918547,1918492,1918975	WP_003419809.1	ergothioneine biosynthesis glutamate--cysteine ligase EgtA	80.0	25.0	75.0
MGA_1905	LOCUS_19040	sequence1:1919843..1920484(-)	frameshift		1919838,1919887	WP_009561250.1	MFS transporter	68.5	38.7	31.5
MGA_1906	LOCUS_19050	sequence1:1921490..1921837(-)	frameshift		1921889,1921701,1921813,1921914,1921965,1921743	WP_005115862.1	TetR/AcrR family transcriptional regulator	60.0	33.0	43.5
MGA_1907	LOCUS_19060	sequence1:1921957..1922223(-)	frameshift		1921889,1921701,1921813,1921914,1921965,1921743	WP_005115862.1	TetR/AcrR family transcriptional regulator	88.6	37.3	71.8
MGA_1910	LOCUS_19090	sequence1:1923441..1923887(-)	frameshift,internal_stop_codon	1923440..1923442(-)	1923680,1923412,1923367,1923503	WP_093949117.1	sigma-70 family RNA polymerase sigma factor	38.5	25.2	54.4
MGA_1911	LOCUS_19100	sequence1:1923884..1924198(-)	frameshift		1924267,1924245,1923939	WP_013225375.1	flavodoxin family protein	82.7	36.8	81.4
MGA_1912	LOCUS_19110	sequence1:1924262..1924618(-)	internal_stop_codon	1924262..1924264(-)		WP_003404764.1	flavodoxin family protein	93.2	44.9	66.4
MGA_1913	LOCUS_19120	sequence1:1924611..1924934(-)	frameshift		1924968,1924971	WP_005111736.1	DUF417 family protein	93.5	58.1	57.0
MGA_1914	LOCUS_19130	sequence1:1925681..1926217(-)	frameshift,internal_stop_codon	1925798..1925800(-)	1925713,1925809	WP_193485703.1	creatininase family protein	69.7	46.2	58.1
MGA_1919	LOCUS_19180	sequence1:1928496..1929386(+)	frameshift		1928336,1928314,1928375,1928424,1928458	WP_005110627.1	FtsK/SpoIIIE domain-containing protein	97.3	59.9	76.0
MGA_1921	LOCUS_19200	sequence1:1930045..1930737(+)	frameshift,internal_stop_codon	1930784..1930786(+)	1930711,1930837,1930039	WP_005110629.1	plasmid replication initiator protein	97.0	38.7	51.3
MGA_1924	LOCUS_19230	sequence1:1932916..1933329(-)	frameshift		1933336,1933417,1932940	WP_010886130.1	HNH endonuclease signature motif containing protein	94.2	35.9	56.0
MGA_1945	LOCUS_19440	sequence1:1955306..1956190(-)	frameshift		1956197	WP_011727446.1	MCE family protein	100.0	57.3	52.6
MGA_1946	LOCUS_19450	sequence1:1956551..1956871(-)	frameshift		1956580	WP_005079778.1	MCE family protein	89.6	18.6	67.4
MGA_1949	LOCUS_19480	sequence1:1958949..1959548(+)	partial			WP_013226070.1	TetR/AcrR family transcriptional regulator	42.2	40.0	45.2
MGA_1973	LOCUS_19710	sequence1:1984366..1984617(-)	internal_stop_codon	1984645..1984647(-)		WP_003409179.1	PPE family protein	100.0	17.6	36.9
MGA_1974	LOCUS_19720	sequence1:1984645..1985427(-)	internal_stop_codon	1984645..1984647(-)		WP_003409179.1	PPE family protein	84.2	55.3	34.5
MGA_1978	LOCUS_19760	sequence1:1987670..1988362(-)	partial			WP_005079442.1	hypothetical protein	53.5	68.0	56.9
MGA_1983	LOCUS_19810	sequence1:1992172..1992900(+)	partial			WP_003403262.1	hypothetical protein	66.5	63.4	31.3
MGA_1984	LOCUS_19820	sequence1:1992906..1993580(-)	partial			WP_073167773.1	tyrosine-type recombinase/integrase	83.5	43.4	30.1
MGA_1987	LOCUS_19850	sequence1:1994417..1994890(-)	frameshift		1994927	WP_000964079.1	recombinase family protein	70.7	59.3	33.0
MGA_2004	LOCUS_20020	sequence1:2011803..2012141(+)	frameshift		2011783	WP_003412710.1	single-stranded DNA-binding protein	100.0	73.9	64.7
MGA_2009	LOCUS_20070	sequence1:2019935..2020219(-)	frameshift		2020235	WP_005113193.1	hypothetical protein	100.0	27.0	63.8
MGA_2010	LOCUS_20080	sequence1:2020227..2020976(-)	frameshift		2020235	WP_005113193.1	hypothetical protein	99.6	71.9	62.5
MGA_2013	LOCUS_20110	sequence1:2023196..2023759(+)	frameshift		2023218,2023163	WP_003899334.1	HNH endonuclease	96.8	81.5	90.1
MGA_2016	LOCUS_20140	sequence1:2024513..2025340(+)	partial			WP_011728045.1	type VII secretion target	99.3	71.6	51.0
MGA_2018	LOCUS_20160	sequence1:2028130..2028600(+)	partial			WP_003905649.1	PE family protein	73.7	18.8	57.8
MGA_2029	LOCUS_20270	sequence1:2040309..2040878(+)	frameshift		2040259	WP_003412624.1	2-oxoacid:ferredoxin oxidoreductase subunit beta	100.0	50.7	83.1
MGA_2032	LOCUS_20300	sequence1:2042644..2042868(+)	frameshift		2042509	WP_003412613.1	resuscitation-promoting factor protein RpfE	100.0	43.0	81.1
MGA_2033	LOCUS_20310	sequence1:2043216..2044247(+)	frameshift		2043150	WP_003412609.1	trans-acting enoyl reductase family protein	99.7	81.6	79.5
MGA_2039	LOCUS_20370	sequence1:2050221..2050670(+)	partial			WP_003412592.1	nucleoside-diphosphate kinase	71.8	78.7	86.0
MGA_2062	LOCUS_20600	sequence1:2075728..2077194(-)	partial			WP_010886098.1	PecA family PE domain-processing aspartic protease	53.3	27.6	38.4
MGA_2070	LOCUS_20680	sequence1:2089625..2094964(+)	frameshift		2094961	WP_005113356.1	type I polyketide synthase	100.0	47.8	72.9
MGA_2071	LOCUS_20690	sequence1:2094969..2097512(+)	frameshift		2094961,2097467	WP_005113356.1	type I polyketide synthase	98.5	22.4	74.0
MGA_2072	LOCUS_20700	sequence1:2097490..2100678(+)	frameshift		2097470	WP_005113356.1	type I polyketide synthase	97.1	27.9	71.1
MGA_2082	LOCUS_20800	sequence1:2110943..2111254(-)	partial			WP_010950491.1	PE family protein	75.7	9.2	41.0
MGA_2110	LOCUS_21080	sequence1:2143228..2144214(+)	frameshift		2143193	WP_003899296.1	NADPH-dependent L-lysine N(6)-monooxygenase MbtG	99.1	75.4	64.3
MGA_2112	LOCUS_21100	sequence1:2144481..2146886(-)	frameshift		2146881	WP_005110643.1	nocobactin polyketide synthase NbtC	99.8	79.5	52.8
MGA_2116	LOCUS_21140	sequence1:2150830..2152245(+)	frameshift		2151936	WP_005110645.1	non-ribosomal peptide synthetase	77.7	21.7	55.9
MGA_2117	LOCUS_21150	sequence1:2152157..2155849(+)	frameshift		2151936	WP_005110645.1	non-ribosomal peptide synthetase	100.0	73.7	57.0
MGA_2122	LOCUS_21200	sequence1:2165395..2166312(+)	frameshift		2166150	WP_003412252.1	heat-inducible transcriptional repressor HrcA	82.6	73.5	88.1
MGA_2123	LOCUS_21210	sequence1:2166230..2166427(+)	frameshift		2166150	WP_010907841.1	heat-inducible transcriptional repressor HrcA	100.0	19.0	87.7
MGA_2128	LOCUS_21260	sequence1:2170094..2172352(+)	partial			WP_003412229.1	hemolysin family protein	45.5	78.6	80.1
MGA_2139	LOCUS_21370	sequence1:2180947..2181444(+)	partial			WP_003900505.1	PPE family protein	100.0	40.9	44.3
MGA_2145	LOCUS_21430	sequence1:2186940..2187383(+)	frameshift		2187317	WP_003899281.1	deoxyguanosinetriphosphate triphosphohydrolase	89.1	30.4	87.0
MGA_2146	LOCUS_21440	sequence1:2187746..2188222(+)	frameshift		2187690	WP_003899281.1	deoxyguanosinetriphosphate triphosphohydrolase	94.9	34.8	82.0
MGA_2156	LOCUS_21540	sequence1:2197844..2198200(+)	frameshift		2198272,2198188	WP_003402886.1	DUF2064 domain-containing protein	98.3	52.3	60.3
MGA_2157	LOCUS_21550	sequence1:2198285..2198512(+)	frameshift		2198272,2198191	WP_003402886.1	DUF2064 domain-containing protein	100.0	34.1	62.7
MGA_2160	LOCUS_21580	sequence1:2199565..2199921(-)	partial			WP_011730788.1	thioredoxin family protein	89.8	68.8	69.8
MGA_2176	LOCUS_21740	sequence1:2216880..2217383(+)	partial			WP_003899112.1	CAP domain-containing protein	95.2	71.9	61.0
MGA_2180	LOCUS_21780	sequence1:2221032..2224130(-)	frameshift		2224233	WP_005079415.1	bifunctional nitrate reductase/sulfite reductase flavoprotein subunit alpha	100.0	81.1	55.2
MGA_2181	LOCUS_21790	sequence1:2224165..2224920(-)	frameshift		2224239	WP_011205569.1	bifunctional nitrate reductase/sulfite reductase flavoprotein subunit alpha	90.0	15.3	62.8
MGA_2184	LOCUS_21820	sequence1:2227865..2228431(+)	partial			WP_037388632.1	isoprenylcysteine carboxylmethyltransferase family protein	71.3	81.2	31.1
MGA_2186	LOCUS_21840	sequence1:2231039..2231194(-)	frameshift		2231210	WP_003411970.1	MarR family winged helix-turn-helix transcriptional regulator	96.1	30.1	81.6
MGA_2191	LOCUS_21890	sequence1:2236488..2237189(+)	frameshift		2236338,2236477	WP_011727654.1	ornithine--oxo-acid transaminase	98.7	54.5	76.5
MGA_2201	LOCUS_21990	sequence1:2246730..2247425(+)	partial			WP_042510577.1	hypothetical protein	42.9	57.5	38.2
MGA_2207	LOCUS_22050	sequence1:2251777..2252073(+)	partial			WP_076611786.1	IS3-like element ISMsm7 family transposase	100.0	25.4	91.8
MGA_2209	LOCUS_22070	sequence1:2253422..2253931(+)	partial			WP_076611786.1	IS3-like element ISMsm7 family transposase	80.5	35.2	91.2
MGA_2210	LOCUS_22080	sequence1:2253876..2254160(+)	partial			WP_076611786.1	IS3-like element ISMsm7 family transposase	60.6	14.8	86.0
MGA_2211	LOCUS_22090	sequence1:2254108..2254563(-)	frameshift		2254744,2254775	WP_011728521.1	IS30-like element ISMsm8 family transposase	100.0	32.4	89.4
MGA_2212	LOCUS_22100	sequence1:2254686..2255519(-)	frameshift		2254744,2254775	WP_011728521.1	IS30-like element ISMsm8 family transposase	90.6	53.9	88.8
MGA_2213	LOCUS_22110	sequence1:2255655..2255849(+)	frameshift		2255623	WP_076611786.1	IS3-like element ISMsm7 family transposase	100.0	16.6	95.3
MGA_2216	LOCUS_22140	sequence1:2256575..2257432(+)	frameshift		2256560	WP_085976939.1	IS3 family transposase	100.0	73.9	90.6
MGA_2228	LOCUS_22260	sequence1:2267286..2267753(+)	frameshift		2267729	WP_003415142.1	MFS transporter	98.7	34.4	60.1
MGA_2229	LOCUS_22270	sequence1:2267882..2268442(+)	frameshift		2267729,2268398	WP_003415142.1	MFS transporter	95.7	40.0	65.2
MGA_2230	LOCUS_22280	sequence1:2268693..2269217(+)	partial			WP_003412264.1	Low molecular weight antigen MTB12	68.4	69.0	60.5
MGA_2232	LOCUS_22300	sequence1:2269815..2270525(+)	partial			WP_013230560.1	NUDIX domain-containing protein	63.6	75.7	29.8
MGA_2233	LOCUS_22310	sequence1:2270535..2271407(+)	partial			WP_003899282.1	TPM domain-containing protein	58.3	25.8	46.8
MGA_2241	LOCUS_22390	sequence1:2278752..2281313(+)	partial			WP_013227688.1	SpoIIE family protein phosphatase	58.3	36.2	48.8
MGA_2247	LOCUS_22450	sequence1:2284445..2284987(-)	partial			WP_011729147.1	hypothetical protein	22.2	21.3	56.8
MGA_2251	LOCUS_22490	sequence1:2287976..2288452(+)	partial			WP_014467653.1	ATP-binding protein	73.4	82.2	43.1
MGA_2252	LOCUS_22500	sequence1:2288586..2289035(+)	partial			WP_003409543.1	anti-sigma factor antagonist	74.5	77.6	42.3
MGA_2254	LOCUS_22520	sequence1:2290039..2291076(+)	frameshift		2290875	WP_011728273.1	carbamoyltransferase HypF	77.7	35.3	67.7
MGA_2255	LOCUS_22530	sequence1:2290964..2292598(+)	frameshift		2290881	WP_011728273.1	carbamoyltransferase HypF	81.6	59.1	68.7
MGA_2265	LOCUS_22630	sequence1:2301159..2301644(-)	partial			WP_011728641.1	3-ketosteroid-delta-1-dehydrogenase	38.5	11.1	53.2
MGA_2276	LOCUS_22740	sequence1:2310558..2310977(-)	frameshift		2310973	WP_003894238.1	SDR family NAD(P)-dependent oxidoreductase	98.6	48.3	69.5
MGA_2277	LOCUS_22750	sequence1:2310908..2311384(-)	frameshift		2310973	WP_003894238.1	SDR family NAD(P)-dependent oxidoreductase	85.4	47.3	69.6
MGA_2314	LOCUS_23120	sequence1:2346861..2348795(-)	partial			WP_013224710.1	class I SAM-dependent methyltransferase	14.9	40.2	48.5
MGA_2327	LOCUS_23250	sequence1:2360073..2360531(+)	partial			WP_126863657.1	LLM class flavin-dependent oxidoreductase	65.8	25.7	36.9
MGA_2331	LOCUS_23290	sequence1:2362476..2362976(-)	frameshift		2362532	WP_011730142.1	coniferyl-alcohol dehydrogenase	85.5	52.5	31.8
MGA_2332	LOCUS_23300	sequence1:2363129..2364121(+)	partial			WP_005093909.1	LLM class flavin-dependent oxidoreductase	40.3	38.9	35.8
MGA_2338	LOCUS_23360	sequence1:2369603..2370520(+)	frameshift		2370178	WP_003899254.1	hypothetical protein	63.9	79.3	72.8
MGA_2342	LOCUS_23400	sequence1:2373089..2373634(+)	partial			WP_013229251.1	TetR/AcrR family transcriptional regulator C-terminal domain-containing protein	75.1	64.8	34.3
MGA_2344	LOCUS_23420	sequence1:2374920..2375447(-)	frameshift		2375512,2375475	WP_003411714.1	Na+/H+ antiporter	100.0	32.3	70.9
MGA_2345	LOCUS_23430	sequence1:2375414..2376538(-)	frameshift		2375475,2375515	WP_003411714.1	Na+/H+ antiporter	86.4	59.4	77.4
MGA_2346	LOCUS_23440	sequence1:2376581..2377696(-)	partial			WP_013227909.1	DUF5685 family protein	87.3	69.9	53.7
MGA_2356	LOCUS_23540	sequence1:2392505..2395195(-)	partial			WP_236615777.1	RecQ family ATP-dependent DNA helicase	61.9	56.3	34.0
MGA_2357	LOCUS_23550	sequence1:2395131..2395721(-)	frameshift		2395148	WP_011392668.1	helicase C-terminal domain-containing protein	84.7	17.4	25.9
MGA_2358	LOCUS_23560	sequence1:2396002..2396730(-)	partial			WP_011030465.1	ATP-dependent DNA helicase	86.8	32.4	33.3
MGA_2365	LOCUS_23630	sequence1:2403128..2403445(-)	frameshift		2403468	WP_011393564.1	ATP-binding protein	64.8	42.0	50.0
MGA_2366	LOCUS_23640	sequence1:2403373..2404017(-)	frameshift		2403468	WP_010974232.1	IS21-like element helper ATPase IstB	73.4	62.3	35.7
MGA_2370	LOCUS_23680	sequence1:2408966..2409211(+)	frameshift,internal_stop_codon	2408890..2408892(+)	2408934	WP_011727547.1	hypothetical protein	93.8	62.8	64.5
MGA_2371	LOCUS_23690	sequence1:2409271..2410863(-)	partial			WP_014878013.1	serine/threonine-protein kinase	51.7	52.7	53.6
MGA_2373	LOCUS_23710	sequence1:2412523..2413254(+)	partial			WP_013390253.1	DUF1524 domain-containing protein	93.8	65.1	39.3
MGA_2374	LOCUS_23720	sequence1:2413456..2415432(-)	partial			WP_013230569.1	serine/threonine-protein kinase	48.5	53.5	49.5
MGA_2378	LOCUS_23760	sequence1:2417959..2418888(+)	frameshift		2418798	WP_013230569.1	serine/threonine-protein kinase	89.0	48.4	52.7
MGA_2381	LOCUS_23790	sequence1:2420420..2420887(+)	frameshift		2420845	WP_011730269.1	winged helix-turn-helix transcriptional regulator	79.4	57.9	43.2
MGA_2384	LOCUS_23820	sequence1:2422061..2422666(+)	partial			WP_003817748.1	methionine biosynthesis protein MetW	51.2	53.9	37.2
MGA_2385	LOCUS_23830	sequence1:2422656..2423270(-)	frameshift		2423349	WP_003900650.1	phosphotransferase family protein	84.8	47.4	29.4
MGA_2391	LOCUS_23890	sequence1:2427996..2428886(-)	frameshift		2428163	WP_011031537.1	acyl-CoA synthetase	83.1	47.7	34.6
MGA_2397	LOCUS_23950	sequence1:2434394..2435101(-)	partial			WP_223495338.1	hypothetical protein	20.4	70.0	63.3
MGA_2408	LOCUS_24060	sequence1:2443999..2444775(-)	frameshift		2444773	WP_003411596.1	FAD-binding oxidoreductase	100.0	48.8	84.9
MGA_2413	LOCUS_24110	sequence1:2450717..2451013(-)	frameshift		2451065,2451171	WP_003411576.1	3-oxoacyl-ACP synthase KasB	100.0	23.5	94.9
MGA_2414	LOCUS_24120	sequence1:2450917..2451972(-)	frameshift		2451068,2451174	WP_003411576.1	3-oxoacyl-ACP synthase KasB	76.1	64.0	90.6
MGA_2426	LOCUS_24240	sequence1:2463530..2465155(+)	partial			WP_012256192.1	YfjI family protein	82.3	53.9	29.7
MGA_2442	LOCUS_24390	sequence1:2477239..2477610(+)	frameshift		2477171	WP_003897072.1	alpha/beta fold hydrolase	100.0	33.2	76.4
MGA_2446	LOCUS_24430	sequence1:2480462..2480734(-)	frameshift		2480733	WP_003411514.1	SURF1 family protein	98.9	29.2	65.2
MGA_2447	LOCUS_24440	sequence1:2480698..2481321(-)	frameshift		2480733	WP_003411514.1	SURF1 family protein	92.3	70.5	82.7
MGA_2449	LOCUS_24460	sequence1:2481811..2482479(-)	partial			WP_003411507.1	HAD family hydrolase	96.8	73.9	74.9
MGA_2451	LOCUS_24480	sequence1:2483634..2484785(+)	partial			WP_003411502.1	Nif3-like dinuclear metal center hexameric protein	56.7	57.3	74.2
MGA_2455	LOCUS_24520	sequence1:2488581..2489594(-)	frameshift		2489838	WP_010950676.1	CYTH and CHAD domain-containing protein	97.3	64.3	68.9
MGA_2469	LOCUS_24660	sequence1:2505657..2506148(-)	frameshift		2506147,2506367	WP_010907972.1	TIGR01777 family oxidoreductase	96.9	51.5	83.5
MGA_2474	LOCUS_24710	sequence1:2511315..2512550(-)	frameshift		2512564	WP_003899220.1	leucyl aminopeptidase	99.8	79.6	81.7
MGA_2475	LOCUS_24720	sequence1:2512493..2512864(-)	frameshift		2512564	WP_003411444.1	leucyl aminopeptidase	79.7	19.0	58.2
MGA_2476	LOCUS_24730	sequence1:2512954..2513880(+)	frameshift		2513433,2513836	WP_003899219.1	glycine cleavage system aminomethyltransferase GcvT	48.4	40.6	83.2
MGA_2477	LOCUS_24740	sequence1:2513847..2514080(+)	frameshift		2513836	WP_003899219.1	glycine cleavage system aminomethyltransferase GcvT	100.0	21.0	77.9
MGA_2479	LOCUS_24760	sequence1:2515279..2515854(-)	frameshift		2515350	WP_003411433.1	adenosylcobinamide-GDP ribazoletransferase	79.6	62.2	56.8
MGA_2487	LOCUS_24840	sequence1:2521247..2521861(+)	frameshift		2521242	WP_003411414.1	carbohydrate kinase family protein	99.5	62.7	83.3
MGA_2495	LOCUS_24920	sequence1:2529486..2530730(-)	partial			WP_003411396.1	ubiquinol-cytochrome c reductase iron-sulfur subunit	75.4	72.7	77.6
MGA_2497	LOCUS_24940	sequence1:2531643..2531993(-)	frameshift		2531992	WP_010907992.1	heme-copper oxidase subunit III	100.0	57.4	93.1
MGA_2498	LOCUS_24950	sequence1:2531942..2532163(-)	frameshift		2531992	WP_003411389.1	heme-copper oxidase subunit III	78.1	28.1	96.5
MGA_2500	LOCUS_24970	sequence1:2535403..2535666(+)	partial			WP_029104374.1	hypothetical protein	63.2	74.3	76.4
MGA_2510	LOCUS_25070	sequence1:2544451..2545119(-)	frameshift		2545189	WP_010908002.1	glycosyltransferase 87 family protein	92.8	48.1	67.0
MGA_2512	LOCUS_25090	sequence1:2546737..2547093(+)	frameshift		2547090	WP_003411331.1	polyadenylate-specific 3'-exoribonuclease AS	100.0	70.2	83.9
MGA_2513	LOCUS_25100	sequence1:2547272..2547814(+)	frameshift		2547763,2547967	WP_003411323.1	3-deoxy-7-phosphoheptulonate synthase class II	93.3	36.4	83.3
MGA_2514	LOCUS_25110	sequence1:2547781..2547984(+)	frameshift		2547970,2547763	WP_003911784.1	3-deoxy-7-phosphoheptulonate synthase class II	94.0	13.6	88.9
MGA_2515	LOCUS_25120	sequence1:2547971..2548663(+)	frameshift		2547970,2547763	WP_003411323.1	3-deoxy-7-phosphoheptulonate synthase class II	100.0	49.8	92.6
MGA_2521	LOCUS_25180	sequence1:2554155..2554337(-)	frameshift		2554347	WP_003411238.1	lipoprotein LppM	100.0	26.4	55.0
MGA_2525	LOCUS_25220	sequence1:2557957..2558220(+)	frameshift		2557787	WP_003411221.1	16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH	90.8	19.9	82.3
MGA_2529	LOCUS_25260	sequence1:2563772..2564551(+)	frameshift		2563556,2563773	WP_003411187.1	UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase	99.2	52.2	68.5
MGA_2543	LOCUS_25400	sequence1:2578180..2578782(-)	frameshift		2578853	WP_003411129.1	phosphoribosyltransferase family protein	99.5	56.5	74.4
MGA_2544	LOCUS_25410	sequence1:2579533..2580219(+)	frameshift		2579479	WP_003405370.1	PE domain-containing protein	100.0	83.3	37.5
MGA_2546	LOCUS_25430	sequence1:2581810..2583639(+)	frameshift,internal_stop_codon	2582741..2582743(+)	2583168,2583171,2583588,2583173,2582758,2583597,2583599,2583600,2583153,2583602,2583606,2582806,2582876	WP_010950491.1	PE family protein	20.4	14.6	58.1
MGA_2548	LOCUS_25450	sequence1:2584855..2585436(+)	partial			WP_012296511.1	hypothetical protein	100.0	60.5	88.6
MGA_2550	LOCUS_25470	sequence1:2586403..2586708(+)	internal_stop_codon	2586373..2586375(+)		WP_005110609.1	CBASS cGAMP-activated phospholipase	95.0	25.9	83.3
MGA_2552	LOCUS_25490	sequence1:2588166..2588972(-)	frameshift		2589041,2588971	WP_086005074.1	IS3-like element ISPsy9 family transposase	100.0	58.3	48.1
MGA_2554	LOCUS_25510	sequence1:2589529..2589789(-)	partial			WP_114555269.1	IS30 family transposase	89.5	22.9	67.5
MGA_2556	LOCUS_25530	sequence1:2591270..2592406(-)	partial			WP_008783747.1	IS30-like element ISBlo4 family transposase	71.4	60.8	40.9
MGA_2562	LOCUS_25590	sequence1:2597545..2598117(+)	partial			WP_003901025.1	lipoprotein LpqS	56.8	80.8	37.0
MGA_2565	LOCUS_25620	sequence1:2601705..2601887(-)	frameshift		2601531,2601972,2601933,2601735	WP_003896811.1	Ppx/GppA phosphatase family protein	83.3	15.8	76.0
MGA_2566	LOCUS_25630	sequence1:2601916..2602086(-)	frameshift		2601735,2601933,2601975	WP_013229925.1	Ppx/GppA phosphatase family protein	58.9	10.4	75.8
MGA_2567	LOCUS_25640	sequence1:2602064..2602417(+)	partial			WP_003901993.1	hemolysin III family protein	92.3	44.6	69.4
MGA_2568	LOCUS_25650	sequence1:2602894..2603430(-)	frameshift		2602701,2602902	WP_003911958.1	DDE-type integrase/transposase/recombinase	79.8	37.0	83.1
MGA_2570	LOCUS_25670	sequence1:2604446..2605480(+)	partial			WP_003404747.1	PPE family protein	54.4	43.5	43.3
MGA_2574	LOCUS_25710	sequence1:2608304..2608723(+)	partial			WP_012804802.1	IS110 family transposase	89.9	35.1	65.6
MGA_2579	LOCUS_25760	sequence1:2613215..2616322(-)	partial			WP_014877954.1	site-specific integrase	24.9	76.4	30.4
MGA_2580	LOCUS_25770	sequence1:2616633..2617694(-)	frameshift		2617785	WP_209648948.1	IS701 family transposase	83.0	79.1	50.3
MGA_2584	LOCUS_25810	sequence1:2619219..2621300(+)	partial			WP_010967414.1	recombinase family protein	33.5	33.4	63.8
MGA_2585	LOCUS_25820	sequence1:2621432..2621725(-)	partial			WP_011726646.1	IS1634-like element IS1549 family transposase	90.7	18.0	65.9
MGA_2588	LOCUS_25850	sequence1:2624074..2624859(-)	partial			WP_005091701.1	ATP-binding cassette domain-containing protein	54.0	15.2	33.6
MGA_2590	LOCUS_25870	sequence1:2626260..2626697(-)	frameshift		2626864,2626761	WP_005084065.1	cation diffusion facilitator family transporter	96.6	41.7	52.5
MGA_2591	LOCUS_25880	sequence1:2626793..2627224(-)	frameshift		2626864,2626761	WP_005084065.1	cation diffusion facilitator family transporter	83.9	37.0	67.5
MGA_2593	LOCUS_25900	sequence1:2628333..2629094(-)	internal_stop_codon	2628333..2628335(-)		WP_003906680.1	PPE family protein	98.0	59.2	44.0
MGA_2595	LOCUS_25920	sequence1:2629510..2629956(+)	partial			WP_003414195.1	hypothetical protein	95.9	70.3	64.8
MGA_2596	LOCUS_25930	sequence1:2630006..2630785(+)	frameshift		2630572	WP_144956692.1	DDE-type integrase/transposase/recombinase	93.8	53.1	74.6
MGA_2597	LOCUS_25940	sequence1:2630803..2631417(+)	frameshift		2630572	WP_144956692.1	DDE-type integrase/transposase/recombinase	100.0	42.8	80.4
MGA_2599	LOCUS_25960	sequence1:2632431..2633537(-)	partial			WP_003417421.1	PDZ-interacting protease regulator Ppr1	51.9	65.5	51.3
MGA_2603	LOCUS_26000	sequence1:2635264..2635656(+)	partial			WP_000904941.1	recombinase family protein	80.0	51.0	43.8
MGA_2605	LOCUS_26020	sequence1:2635800..2636834(-)	frameshift		2635850,2635780	WP_030568499.1	IS110 family transposase	96.8	81.9	54.1
MGA_2611	LOCUS_26080	sequence1:2641193..2641693(-)	frameshift		2641232,2641745,2641754	WP_187436542.1	IS256 family transposase	92.2	34.7	31.0
MGA_2612	LOCUS_26090	sequence1:2641614..2642276(-)	frameshift		2641766	WP_198598615.1	IS256 family transposase	71.8	34.5	32.3
MGA_2617	LOCUS_26140	sequence1:2646521..2647195(+)	partial			WP_151613681.1	Cu(I)-responsive transcriptional regulator	46.4	66.9	40.0
MGA_2619	LOCUS_26160	sequence1:2648609..2648875(+)	partial			WP_012296795.1	transport acessory protein MmpS	97.7	58.5	62.8
MGA_2621	LOCUS_26180	sequence1:2652159..2652794(-)	partial			WP_003726790.1	demethylmenaquinone methyltransferase	59.2	53.2	38.3
MGA_2622	LOCUS_26190	sequence1:2652791..2653495(-)	partial			WP_010950513.1	adenylate cyclase	69.2	41.8	36.7
MGA_2625	LOCUS_26220	sequence1:2654283..2654765(-)	partial			WP_162992322.1	class I SAM-dependent methyltransferase	66.9	44.8	29.9
MGA_2626	LOCUS_26230	sequence1:2654919..2655230(+)	partial			WP_005112726.1	metalloregulator ArsR/SmtB family transcription factor	86.4	69.0	77.5
MGA_2628	LOCUS_26250	sequence1:2657368..2658051(-)	partial			WP_015228421.1	reverse transcriptase N-terminal domain-containing protein	67.8	31.2	36.9
MGA_2629	LOCUS_26260	sequence1:2658048..2658803(-)	frameshift		2658158	WP_001097733.1	group II intron reverse transcriptase/maturase	76.5	35.4	48.0
MGA_2632	LOCUS_26290	sequence1:2659972..2661075(+)	frameshift		2661000	WP_003900518.1	IS110 family transposase	67.6	73.9	44.2
MGA_2634	LOCUS_26310	sequence1:2661598..2662149(-)	frameshift		2661645	WP_085095815.1	IS256 family transposase	93.4	41.6	61.4
MGA_2635	LOCUS_26320	sequence1:2662502..2662912(-)	frameshift		2662904	WP_005095711.1	FAD/NAD(P)-binding oxidoreductase	91.9	31.9	49.6
MGA_2636	LOCUS_26330	sequence1:2662872..2663177(-)	frameshift		2662904,2663325	WP_005095711.1	FAD/NAD(P)-binding oxidoreductase	96.0	25.7	42.0
MGA_2637	LOCUS_26340	sequence1:2663164..2663616(-)	frameshift		2662904,2663325	WP_005095711.1	FAD/NAD(P)-binding oxidoreductase	63.3	24.7	42.7
MGA_2639	LOCUS_26360	sequence1:2664753..2665145(-)	frameshift		2665164,2664782	WP_003900904.1	FAD/NAD(P)-binding oxidoreductase	93.1	33.0	36.4
MGA_2640	LOCUS_26370	sequence1:2665108..2665716(-)	frameshift		2665146	WP_012256474.1	FAD/NAD(P)-binding oxidoreductase	89.6	48.3	37.7
MGA_2642	LOCUS_26390	sequence1:2667997..2668401(+)	frameshift		2667976	WP_003726790.1	demethylmenaquinone methyltransferase	65.7	37.1	44.4
MGA_2647	LOCUS_26440	sequence1:2672439..2672756(-)	partial			WP_003899995.1	manganese-exporting P-type ATPase CtpC	78.1	11.4	81.7
MGA_2659	LOCUS_26560	sequence1:2684048..2685076(+)	frameshift		2684929,2684930,2684675,2684935,2684911	WP_010886112.1	PE family protein	34.5	19.6	56.8
MGA_2664	LOCUS_26610	sequence1:2689563..2689886(+)	frameshift		2689564	WP_005087440.1	response regulator transcription factor	86.9	43.3	61.3
MGA_2665	LOCUS_26620	sequence1:2689946..2694853(-)	partial			WP_122524938.1	PPE domain-containing protein	99.6	49.3	45.9
MGA_2666	LOCUS_26630	sequence1:2695258..2698842(-)	frameshift		2695347,2695350,2695353,2695323,2695356,2695341	WP_122524938.1	PPE domain-containing protein	78.0	28.2	44.1
MGA_2667	LOCUS_26640	sequence1:2699265..2699576(-)	frameshift		2699417,2699637	WP_014877967.1	quinone-dependent dihydroorotate dehydrogenase	51.5	15.0	88.7
MGA_2668	LOCUS_26650	sequence1:2699632..2700375(-)	frameshift		2699640,2699420	WP_003411116.1	quinone-dependent dihydroorotate dehydrogenase	99.6	68.6	77.2
MGA_2669	LOCUS_26660	sequence1:2700432..2700638(-)	partial			WP_003895584.1	DUF5703 family protein	95.6	74.2	75.8
MGA_2671	LOCUS_26680	sequence1:2701837..2702139(+)	partial			WP_003411107.1	hypothetical protein	100.0	74.5	76.5
MGA_2694	LOCUS_26910	sequence1:2724744..2725115(-)	partial			WP_005112505.1	hypothetical protein	56.9	13.3	46.5
MGA_2695	LOCUS_26920	sequence1:2725110..2725589(+)	frameshift		2725529,2725685	WP_003411029.1	pup deamidase/depupylase	88.1	27.7	99.3
MGA_2696	LOCUS_26930	sequence1:2725716..2726606(+)	frameshift		2725688,2725529	WP_003895348.1	pup deamidase/depupylase	99.7	59.2	93.9
MGA_2709	LOCUS_27060	sequence1:2739329..2740021(-)	frameshift		2740006	WP_010950655.1	DUF5631 domain-containing protein	91.3	29.5	44.9
MGA_2711	LOCUS_27080	sequence1:2741540..2741947(-)	partial			WP_003412695.1	hypothetical protein	97.0	57.1	39.0
MGA_2715	LOCUS_27120	sequence1:2744042..2744449(-)	partial			WP_003412695.1	hypothetical protein	97.0	57.1	40.4
MGA_2716	LOCUS_27130	sequence1:2744753..2745160(-)	partial			WP_003412695.1	hypothetical protein	89.6	51.7	37.4
MGA_2717	LOCUS_27140	sequence1:2745800..2746207(-)	partial			WP_003412695.1	hypothetical protein	97.0	57.1	46.0
MGA_2718	LOCUS_27150	sequence1:2746227..2746706(-)	frameshift		2746768,2746737,2746667,2746595	WP_011727513.1	IS1634-like element ISMsm6 family transposase	76.7	22.2	67.2
MGA_2719	LOCUS_27160	sequence1:2746703..2747149(-)	frameshift		2746768,2746737,2746670,2746598	WP_011727513.1	IS1634-like element ISMsm6 family transposase	82.4	22.4	72.1
MGA_2720	LOCUS_27170	sequence1:2747358..2747777(-)	frameshift		2747457,2747939,2747912,2747417,2747770,2748027,2748063	WP_011970282.1	tyrosine-type recombinase/integrase	82.7	35.2	55.2
MGA_2721	LOCUS_27180	sequence1:2748541..2749197(-)	frameshift,internal_stop_codon	2749194..2749196(-)	2748530,2748683,2749166	WP_149764770.1	tyrosine-type recombinase/integrase	69.3	49.0	39.1
MGA_2722	LOCUS_27190	sequence1:2749301..2749588(-)	internal_stop_codon	2749712..2749714(-)		WP_149764772.1	site-specific integrase	71.6	17.1	52.9
MGA_2723	LOCUS_27200	sequence1:2750333..2750980(-)	frameshift		2750975	WP_011727513.1	IS1634-like element ISMsm6 family transposase	88.8	36.5	54.3
MGA_2725	LOCUS_27220	sequence1:2752762..2753502(-)	frameshift		2753509	WP_011730306.1	EspA/EspE family type VII secretion system effector	97.6	28.6	28.7
MGA_2726	LOCUS_27230	sequence1:2753465..2755144(-)	frameshift		2753509	WP_005092955.1	hypothetical protein	59.4	47.7	33.0
MGA_2740	LOCUS_27370	sequence1:2766892..2767566(+)	frameshift		2766854	WP_011729371.1	ABC transporter substrate-binding protein	100.0	65.9	62.9
MGA_2741	LOCUS_27380	sequence1:2767581..2768936(+)	partial			WP_005080059.1	LLM class flavin-dependent oxidoreductase	66.3	81.9	75.9
MGA_2747	LOCUS_27440	sequence1:2775407..2777179(-)	partial			WP_014878493.1	sulfotransferase	36.9	57.9	33.2
MGA_2748	LOCUS_27450	sequence1:2777176..2778399(-)	partial			WP_013224715.1	hypothetical protein	73.2	79.0	31.9
MGA_2753	LOCUS_27500	sequence1:2781479..2781796(+)	frameshift		2781429,2781423	WP_003410605.1	amidohydrolase	100.0	19.5	78.1
MGA_2755	LOCUS_27520	sequence1:2783927..2784664(+)	frameshift,internal_stop_codon	2783854..2783856(+)	2783913,2783895	WP_003902238.1	apolipoprotein N-acyltransferase	99.6	27.6	81.6
MGA_2758	LOCUS_27550	sequence1:2785951..2793540(+)	frameshift		2792622	WP_010886138.1	type I polyketide synthase	87.7	53.2	78.5
MGA_2759	LOCUS_27560	sequence1:2793494..2798410(+)	partial			WP_010950651.1	type I polyketide synthase	100.0	39.6	71.0
MGA_2761	LOCUS_27580	sequence1:2801020..2801820(+)	frameshift		2801706,2801709,2801742,2801712,2802033,2801940,2802039,2801721	WP_010950597.1	PE family protein	41.0	17.0	52.3
MGA_2763	LOCUS_27600	sequence1:2802605..2803018(-)	frameshift		2803097,2802746,2803046	WP_003899146.1	hypothetical protein	65.7	41.3	76.7
MGA_2784	LOCUS_27810	sequence1:2821416..2821790(+)	partial			WP_005056472.1	MerR family transcriptional regulator	58.1	78.3	72.2
MGA_2786	LOCUS_27830	sequence1:2823365..2823808(+)	partial			WP_011727887.1	NAD(P)H-dependent oxidoreductase	87.8	62.9	67.4
MGA_2804	LOCUS_28010	sequence1:2839131..2841125(+)	partial			WP_003908846.1	PE family protein	20.3	37.4	42.2
MGA_2806	LOCUS_28030	sequence1:2844142..2844471(-)	frameshift		2844183	WP_014877720.1	MmpS family protein	92.7	65.0	54.9
MGA_2809	LOCUS_28060	sequence1:2846582..2848162(-)	partial			WP_010950639.1	PecA family PE domain-processing aspartic protease	59.3	55.6	59.2
MGA_2812	LOCUS_28090	sequence1:2849715..2850698(+)	partial			WP_003813493.1	TauD/TfdA family dioxygenase	82.3	73.9	34.2
MGA_2814	LOCUS_28110	sequence1:2854449..2854685(-)	partial			WP_003409780.1	type II toxin-antitoxin system antitoxin MazE5	100.0	62.4	82.1
MGA_2828	LOCUS_28250	sequence1:2866946..2867923(+)	internal_stop_codon	2867921..2867923(+)		WP_010974286.1	KAP family P-loop domain protein	82.2	49.1	26.0
MGA_2832	LOCUS_28290	sequence1:2870874..2871287(+)	frameshift		2870872,2871245	WP_189327688.1	IS21 family transposase	89.8	22.1	50.4
MGA_2833	LOCUS_28300	sequence1:2871254..2871958(+)	frameshift,internal_stop_codon	2871822..2871824(+)	2871251,2871836,2871773	WP_189327688.1	IS21 family transposase	97.4	40.7	44.0
MGA_2834	LOCUS_28310	sequence1:2871955..2872575(+)	frameshift		2872611,2872551,2872503	WP_010974232.1	IS21-like element helper ATPase IstB	76.2	62.3	35.7
MGA_2835	LOCUS_28320	sequence1:2872823..2873563(+)	partial			WP_010974284.1	hypothetical protein	60.2	33.1	31.8
MGA_2836	LOCUS_28330	sequence1:2873560..2874315(+)	partial			WP_010884094.1	TatD family hydrolase	66.1	73.0	34.6
MGA_2846	LOCUS_28430	sequence1:2880142..2880471(-)	partial			WP_014877774.1	FHA domain-containing protein	91.7	63.3	66.0
MGA_2856	LOCUS_28530	sequence1:2888700..2889581(+)	partial			WP_011268690.1	EAL domain-containing protein	50.2	21.8	38.6
MGA_2865	LOCUS_28620	sequence1:2899818..2901230(-)	partial			WP_003899026.1	PPE family protein	72.1	81.1	42.5
MGA_2870	LOCUS_28670	sequence1:2905491..2906234(+)	frameshift		2905387,2905263	WP_011731309.1	prenyltransferase	97.6	69.3	73.4
MGA_2894	LOCUS_28910	sequence1:2926947..2927387(+)	frameshift		2927288,2927445	WP_011090311.1	LLM class flavin-dependent oxidoreductase	93.2	30.1	39.1
MGA_2895	LOCUS_28920	sequence1:2927469..2928320(+)	frameshift		2927288,2927445	WP_011731420.1	LLM class flavin-dependent oxidoreductase	96.8	60.3	43.5
MGA_2897	LOCUS_28940	sequence1:2930044..2930610(+)	frameshift		2929872,2930104	WP_003104714.1	acyl-CoA dehydrogenase family protein	91.5	43.9	43.4
MGA_2899	LOCUS_28960	sequence1:2931186..2931965(-)	frameshift		2931206	WP_198598615.1	IS256 family transposase	89.2	54.7	33.5
MGA_2919	LOCUS_29160	sequence1:2953688..2953972(+)	partial			WP_003409570.1	medium chain dehydrogenase/reductase family protein	81.9	23.1	79.2
MGA_2924	LOCUS_29210	sequence1:2957938..2958450(+)	partial			WP_003900428.1	hypothetical protein	66.5	76.3	65.5
MGA_2949	LOCUS_29460	sequence1:2979394..2979816(+)	internal_stop_codon	2979352..2979354(+),2979340..2979342(+)		WP_003409420.1	resuscitation-promoting factor RpfC	95.7	75.6	61.5
MGA_2958	LOCUS_29550	sequence1:2987110..2987553(-)	frameshift		2987755	WP_003401084.1	virulence factor Mce family protein	93.2	26.0	71.0
MGA_2959	LOCUS_29560	sequence1:2987555..2988691(-)	frameshift		2987758	WP_003401084.1	virulence factor Mce family protein	77.5	55.3	75.8
MGA_2960	LOCUS_29570	sequence1:2988688..2989593(-)	frameshift		2989594,2989733	WP_003901818.1	virulence factor Mce family protein	98.0	59.0	68.8
MGA_2967	LOCUS_29640	sequence1:2996109..2996786(-)	frameshift		2996866	WP_003899061.1	amidohydrolase family protein	89.3	53.2	78.1
MGA_2968	LOCUS_29650	sequence1:2996798..2997088(-)	frameshift		2996866,2997212	WP_003899061.1	amidohydrolase family protein	75.0	19.8	60.0
MGA_2973	LOCUS_29700	sequence1:3002114..3002302(+)	partial			WP_003895017.1	(2Fe-2S)-binding protein	82.3	73.9	66.7
MGA_2989	LOCUS_29860	sequence1:3016520..3017677(-)	frameshift		3017729	WP_003409362.1	acetyl-CoA acetyltransferase	100.0	77.9	76.4
MGA_2991	LOCUS_29880	sequence1:3018567..3019154(+)	frameshift		3019007	WP_003409355.1	SDR family oxidoreductase	68.7	46.9	87.3
MGA_2992	LOCUS_29890	sequence1:3019061..3019426(+)	frameshift		3019013	WP_003409355.1	SDR family oxidoreductase	97.5	41.3	75.4
MGA_2999	LOCUS_29960	sequence1:3026416..3027654(-)	partial			WP_003409337.1	adhesin Apa	46.1	58.8	74.9
MGA_3000	LOCUS_29970	sequence1:3027743..3028528(-)	frameshift		3028494	WP_003899051.1	sulfate/molybdate ABC transporter ATP-binding protein	96.9	68.6	67.3
MGA_3001	LOCUS_29980	sequence1:3028468..3028836(-)	frameshift		3028494	WP_003899051.1	sulfate/molybdate ABC transporter ATP-binding protein	92.6	30.6	73.5
MGA_3002	LOCUS_29990	sequence1:3028843..3029238(-)	frameshift		3029328,3029430	WP_003409329.1	ABC transporter permease	100.0	49.6	71.8
MGA_3003	LOCUS_30000	sequence1:3029650..3030000(-)	frameshift		3030034	WP_003409326.1	molybdate ABC transporter substrate-binding protein	100.0	44.4	64.7
MGA_3008	LOCUS_30050	sequence1:3033738..3034070(-)	internal_stop_codon	3033738..3033740(-)		WP_003903650.1	PaaI family thioesterase	100.0	79.3	73.0
MGA_3024	LOCUS_30210	sequence1:3053522..3054082(-)	frameshift		3054113	WP_003899038.1	DUF881 domain-containing protein	100.0	63.7	82.3
MGA_3045	LOCUS_30420	sequence1:3077064..3077966(-)	frameshift		3077970	WP_003409179.1	PPE family protein	100.0	72.2	32.6
MGA_3046	LOCUS_30430	sequence1:3078341..3078571(-)	partial			WP_003409179.1	PPE family protein	98.7	18.4	47.4
MGA_3047	LOCUS_30440	sequence1:3078469..3079572(-)	frameshift		3078663	WP_003409179.1	PPE family protein	85.3	78.2	41.0
MGA_3055	LOCUS_30520	sequence1:3089319..3089615(-)	partial			WP_003417421.1	PDZ-interacting protease regulator Ppr1	94.9	38.1	34.6
MGA_3058	LOCUS_30550	sequence1:3092178..3092498(-)	partial			WP_003406566.1	DUF732 domain-containing protein	80.2	74.3	35.3
MGA_3059	LOCUS_30560	sequence1:3092495..3093736(-)	partial			WP_010950602.1	type VII secretion system ESX-5 target PPE26	72.9	73.5	45.7
MGA_3063	LOCUS_30600	sequence1:3097081..3099423(-)	frameshift		3099548	WP_010950600.1	type VII secretion system ESX-5 FtsK/SpoIIIE family ATPase EccC5	100.0	56.3	89.3
MGA_3064	LOCUS_30610	sequence1:3099312..3101252(-)	frameshift		3099551	WP_010950600.1	type VII secretion system ESX-5 FtsK/SpoIIIE family ATPase EccC5	87.8	40.7	90.3
MGA_3080	LOCUS_30770	sequence1:3118020..3119042(+)	internal_stop_codon	3118008..3118010(+)		WP_013228884.1	alpha-ketoacid dehydrogenase subunit alpha/beta	97.6	50.0	49.5
MGA_3084	LOCUS_30810	sequence1:3121758..3123140(+)	partial			WP_011726824.1	aromatic ring-hydroxylating dioxygenase subunit alpha	42.4	47.3	33.8
MGA_3089	LOCUS_30860	sequence1:3127591..3128049(-)	frameshift		3128053	WP_011729910.1	class I SAM-dependent methyltransferase	97.4	80.9	63.5
MGA_3092	LOCUS_30890	sequence1:3129996..3130814(-)	frameshift		3130352,3130160,3130830	WP_003898977.1	HNH endonuclease signature motif containing protein	73.2	47.8	49.3
MGA_3095	LOCUS_30920	sequence1:3134253..3134852(+)	frameshift		3134221	WP_013228930.1	cytochrome P450	87.4	43.4	45.1
MGA_3101	LOCUS_30980	sequence1:3138737..3140401(-)	frameshift		3140501	WP_003903597.1	RND family transporter	100.0	58.7	58.6
MGA_3102	LOCUS_30990	sequence1:3140286..3141566(-)	frameshift		3140501	WP_003903597.1	RND family transporter	83.1	37.5	61.3
MGA_3107	LOCUS_31040	sequence1:3144317..3145489(-)	partial			WP_003413385.1	protein translocase subunit SecD	83.3	64.4	48.4
MGA_3113	LOCUS_31100	sequence1:3150470..3151711(-)	frameshift,internal_stop_codon	3150538..3150540(-)	3150697	WP_003408560.1	FAD-dependent oxidoreductase	81.8	73.3	77.8
MGA_3115	LOCUS_31120	sequence1:3153852..3154436(+)	frameshift		3153689,3154170,3153827,3154119	WP_011727501.1	NYN domain-containing protein	99.5	67.8	69.2
MGA_3117	LOCUS_31140	sequence1:3155134..3155487(-)	frameshift		3155500	WP_004186908.1	UbiX family flavin prenyltransferase	88.0	52.0	60.2
MGA_3118	LOCUS_31150	sequence1:3155498..3155749(-)	frameshift		3155500	WP_015923244.1	UbiX family flavin prenyltransferase	89.2	36.1	54.1
MGA_3119	LOCUS_31160	sequence1:3155746..3155997(-)	frameshift		3156155	WP_002286329.1	UbiD family decarboxylase	84.3	14.5	52.1
MGA_3120	LOCUS_31170	sequence1:3156129..3157259(-)	frameshift		3156158	WP_013096564.1	UbiD family decarboxylase	94.4	72.1	64.1
MGA_3123	LOCUS_31200	sequence1:3158801..3159478(-)	frameshift		3159489	WP_003896236.1	amidohydrolase family protein	92.9	48.7	43.9
MGA_3124	LOCUS_31210	sequence1:3159475..3160068(-)	frameshift		3159489	WP_003896236.1	amidohydrolase family protein	79.7	35.7	47.8
MGA_3125	LOCUS_31220	sequence1:3160099..3160872(-)	partial			WP_004453954.1	class II aldolase/adducin family protein	59.1	70.4	29.4
MGA_3128	LOCUS_31250	sequence1:3163872..3165074(+)	frameshift		3164993	WP_003401347.1	PPE family protein	86.2	61.2	59.1
MGA_3129	LOCUS_31260	sequence1:3165071..3165538(+)	frameshift		3164993	WP_003401347.1	PPE family protein	82.6	23.7	40.2
MGA_3136	LOCUS_31330	sequence1:3172578..3173948(+)	frameshift		3173669	WP_011023333.1	phosphoenolpyruvate synthase	81.6	46.9	58.2
MGA_3137	LOCUS_31340	sequence1:3173875..3174975(+)	frameshift		3173675	WP_010941469.1	phosphoenolpyruvate synthase	99.2	45.1	66.4
MGA_3143	LOCUS_31400	sequence1:3187077..3188123(-)	frameshift		3188182	WP_003408678.1	DUF4185 domain-containing protein	98.9	61.3	78.8
MGA_3144	LOCUS_31410	sequence1:3188078..3188569(-)	frameshift,internal_stop_codon	3188663..3188665(-)	3188182	WP_003408678.1	DUF4185 domain-containing protein	61.3	19.5	53.6
MGA_3148	LOCUS_31450	sequence1:3192694..3193581(+)	partial			WP_010942960.1	DUF1295 domain-containing protein	68.1	77.7	32.0
MGA_3153	LOCUS_31500	sequence1:3198945..3199433(-)	partial			WP_013225359.1	YbhB/YbcL family Raf kinase inhibitor-like protein	95.1	45.2	60.4
MGA_3159	LOCUS_31560	sequence1:3206065..3206337(-)	frameshift		3206545,3206365	WP_011727513.1	IS1634-like element ISMsm6 family transposase	85.6	13.9	66.2
MGA_3160	LOCUS_31570	sequence1:3206268..3206534(-)	frameshift		3206545,3206365	WP_011727513.1	IS1634-like element ISMsm6 family transposase	62.5	10.5	63.2
MGA_3163	LOCUS_31600	sequence1:3207074..3208663(-)	frameshift		3208709	WP_010938554.1	glutamine synthetase III	99.8	72.7	60.3
MGA_3164	LOCUS_31610	sequence1:3208864..3209253(-)	frameshift		3208712,3208998	WP_010938554.1	glutamine synthetase III	65.9	11.8	52.3
MGA_3168	LOCUS_31650	sequence1:3212274..3212879(-)	partial			WP_011731519.1	ABC transporter permease	99.5	71.4	77.5
MGA_3204	LOCUS_32010	sequence1:3253501..3254013(-)	frameshift		3254029	WP_003898982.1	ParA family protein	100.0	53.8	92.4
MGA_3213	LOCUS_32100	sequence1:3263716..3264129(-)	frameshift		3264145	WP_003408383.1	NAD kinase	100.0	44.6	91.2
MGA_3214	LOCUS_32110	sequence1:3265122..3265628(-)	frameshift		3265090,3265163	WP_011729305.1	TlyA family rRNA (cytidine-2'-O)-methyltransferase	56.5	35.3	83.2
MGA_3229	LOCUS_32260	sequence1:3279236..3280048(+)	frameshift		3279243	WP_003408257.1	ATP-binding cassette domain-containing protein	99.3	44.8	80.6
MGA_3235	LOCUS_32320	sequence1:3298093..3299184(-)	frameshift		3299192	WP_003408180.1	argininosuccinate lyase	100.0	77.2	81.8
MGA_3236	LOCUS_32330	sequence1:3299085..3299504(-)	frameshift		3299192	WP_003408180.1	argininosuccinate lyase	74.8	22.1	93.3
MGA_3239	LOCUS_32360	sequence1:3301278..3301637(-)	frameshift		3301717,3301686	WP_003408165.1	ornithine carbamoyltransferase	97.5	37.8	86.2
MGA_3240	LOCUS_32370	sequence1:3301583..3302206(-)	frameshift		3301689,3301717	WP_011729314.1	ornithine carbamoyltransferase	78.7	53.1	84.7
MGA_3241	LOCUS_32380	sequence1:3302203..3302412(-)	frameshift		3302666,3302458	WP_003408163.1	acetylornithine transaminase	81.2	14.0	83.9
MGA_3242	LOCUS_32390	sequence1:3302499..3303401(-)	frameshift		3302458,3302669	WP_003408163.1	acetylornithine transaminase	80.3	60.2	83.4
MGA_3246	LOCUS_32430	sequence1:3306901..3308172(+)	partial			WP_010886107.1	PE family protein	23.6	13.0	52.0
MGA_3252	LOCUS_32490	sequence1:3312335..3314140(-)	partial			WP_003420809.1	PE family protein	60.6	74.8	33.9
MGA_3253	LOCUS_32500	sequence1:3314238..3315353(-)	frameshift		3315426,3315429,3315447,3315432,3315450	WP_010886125.1	PE domain-containing protein	86.5	31.0	54.8
MGA_3255	LOCUS_32520	sequence1:3316930..3318165(-)	frameshift		3318239	WP_003408148.1	phenylalanine--tRNA ligase subunit beta	100.0	49.5	80.5
MGA_3256	LOCUS_32530	sequence1:3318219..3319415(-)	frameshift		3318239	WP_044511680.1	phenylalanine--tRNA ligase subunit beta	98.5	47.5	80.7
MGA_3259	LOCUS_32560	sequence1:3320826..3321455(-)	frameshift		3320897,3320845	WP_003408145.1	hypothetical protein	89.5	69.8	58.3
MGA_3269	LOCUS_32660	sequence1:3332137..3332811(+)	frameshift		3332132	WP_011729341.1	winged helix DNA-binding domain-containing protein	96.0	54.1	58.1
MGA_3283	LOCUS_32800	sequence1:3343884..3345014(-)	partial			WP_011337207.1	phage major capsid protein	72.1	61.9	29.5
MGA_3293	LOCUS_32900	sequence1:3350404..3350526(+)	partial			WP_003895255.1	MBL fold metallo-hydrolase	100.0	17.1	80.0
MGA_3297	LOCUS_32940	sequence1:3354139..3355128(-)	frameshift		3355195,3355087	WP_003408079.1	MFS transporter	95.1	67.1	64.2
MGA_3298	LOCUS_32950	sequence1:3355154..3355549(-)	frameshift		3355090,3355198	WP_003898954.1	MFS transporter	93.1	25.9	73.8
MGA_3299	LOCUS_32960	sequence1:3355546..3356370(-)	frameshift		3356419,3356453	WP_003911575.1	excinuclease ABC subunit UvrB	100.0	38.2	91.3
MGA_3300	LOCUS_32970	sequence1:3356283..3357860(-)	frameshift		3356453,3356422	WP_003895262.1	excinuclease ABC subunit UvrB	79.4	58.0	90.9
MGA_3302	LOCUS_32990	sequence1:3358414..3359442(+)	frameshift		3358382	WP_011726886.1	DUF3375 domain-containing protein	97.7	68.6	56.1
MGA_3304	LOCUS_33010	sequence1:3360124..3360582(+)	internal_stop_codon	3360580..3360582(+)		WP_011726887.1	ATP-binding protein	98.7	13.4	70.0
MGA_3305	LOCUS_33020	sequence1:3360625..3363489(+)	internal_stop_codon	3360580..3360582(+)		WP_011726887.1	ATP-binding protein	99.8	84.7	56.2
MGA_3308	LOCUS_33050	sequence1:3366165..3368306(+)	frameshift		3366063	WP_003408545.1	ATP transporter ATP-binding protein/permease	93.1	76.3	66.7
MGA_3312	LOCUS_33090	sequence1:3370045..3370458(-)	partial			WP_011728164.1	hypothetical protein	85.4	66.1	52.1
MGA_3322	LOCUS_33190	sequence1:3380380..3380565(-)	frameshift		3380581	WP_010908245.1	ANTAR domain-containing response regulator	98.4	29.3	93.3
MGA_3324	LOCUS_33210	sequence1:3381951..3383765(-)	frameshift,internal_stop_codon	3382994..3382996(-)	3381953,3382658,3381955,3381956,3382661,3381958,3381959,3381833,3381962,3382667,3381964,3381838,3381839,3382289,3381970,3381842,3382676,3382677,3382678,3381841,3382754,3382654,3382379,3382960,3382387,3382778,3382780,3382781,3381950	WP_010950451.1	PE family protein	22.2	16.1	54.5
MGA_3332	LOCUS_33290	sequence1:3393325..3393810(+)	partial			WP_003412264.1	Low molecular weight antigen MTB12	64.0	61.9	56.7
MGA_3338	LOCUS_33350	sequence1:3399619..3400956(-)	frameshift		3400966	WP_010908240.1	prolipoprotein diacylglyceryl transferase	19.1	25.8	71.8
MGA_3342	LOCUS_33390	sequence1:3404577..3405227(-)	internal_stop_codon	3404577..3404579(-)		WP_197492547.1	TIGR02234 family membrane protein	98.6	81.1	54.2
MGA_3347	LOCUS_33440	sequence1:3408751..3410259(+)	partial			WP_011727267.1	serine/threonine-protein kinase	53.2	54.0	66.4
MGA_3358	LOCUS_33550	sequence1:3418202..3418795(-)	frameshift		3418970	WP_003901204.1	L-aspartate oxidase	99.5	37.6	66.0
MGA_3359	LOCUS_33560	sequence1:3418686..3419789(-)	frameshift		3418970	WP_003901204.1	L-aspartate oxidase	73.3	50.7	80.7
MGA_3360	LOCUS_33570	sequence1:3419786..3420562(-)	frameshift		3420572,3420636	WP_003407931.1	quinolinate synthase NadA	100.0	73.9	92.6
MGA_3364	LOCUS_33610	sequence1:3423179..3423478(-)	frameshift		3423480	WP_003914321.1	DUF2567 domain-containing protein	75.8	38.9	65.3
MGA_3365	LOCUS_33620	sequence1:3423397..3423858(-)	frameshift		3423480	WP_003914321.1	DUF2567 domain-containing protein	69.9	57.5	49.5
MGA_3370	LOCUS_33670	sequence1:3427447..3427809(+)	partial			WP_011731324.1	hypothetical protein	75.0	61.2	61.1
MGA_3373	LOCUS_33700	sequence1:3431315..3431749(+)	frameshift		3431713	WP_011729175.1	mechanosensitive ion channel family protein	95.1	29.5	47.4
MGA_3374	LOCUS_33710	sequence1:3431707..3432708(+)	frameshift		3431713	WP_003900521.1	mechanosensitive ion channel	97.6	67.6	66.2
MGA_3376	LOCUS_33730	sequence1:3433355..3433621(-)	frameshift		3433659,3433622	WP_011728882.1	dethiobiotin synthase	97.7	39.1	60.2
MGA_3377	LOCUS_33740	sequence1:3433645..3434022(-)	frameshift		3433656,3433628	WP_010908203.1	dethiobiotin synthase	88.0	48.7	70.0
MGA_3379	LOCUS_33760	sequence1:3435168..3435380(-)	frameshift		3435381	WP_010908201.1	adenosylmethionine--8-amino-7-oxononanoate transaminase	100.0	16.1	90.0
MGA_3382	LOCUS_33790	sequence1:3437447..3438388(+)	partial			WP_003407798.1	NlpC/P60 family peptidoglycan-binding protein RipD	51.4	70.4	78.4
MGA_3387	LOCUS_33840	sequence1:3447081..3447668(-)	partial			WP_005083648.1	hypothetical protein	73.8	73.7	52.4
MGA_3394	LOCUS_33910	sequence1:3451581..3452540(-)	frameshift		3452484	WP_003407781.1	threonine ammonia-lyase	94.0	69.9	82.3
MGA_3402	LOCUS_33990	sequence1:3461145..3462353(+)	partial			WP_003898998.1	serine/threonine protein kinase PknE	76.4	54.6	55.6
MGA_3403	LOCUS_34000	sequence1:3462388..3462987(+)	frameshift		3462384,3462243,3462213,3462246,3462358,3462382,3462207	WP_003419207.1	NHL repeat-containing protein	98.0	54.8	44.6
MGA_3404	LOCUS_34010	sequence1:3462984..3464846(+)	partial			WP_010886110.1	serine/threonine protein kinase PknH	47.9	47.9	57.1
MGA_3405	LOCUS_34020	sequence1:3464846..3466525(+)	partial			WP_003898998.1	serine/threonine protein kinase PknE	30.8	35.3	33.2
MGA_3409	LOCUS_34060	sequence1:3469919..3470437(-)	frameshift		3470002,3470435	WP_003407734.1	SDR family NAD(P)-dependent oxidoreductase	86.6	43.7	89.3
MGA_3413	LOCUS_34100	sequence1:3472719..3473183(+)	frameshift		3473114,3473210	WP_003898940.1	methyltransferase domain-containing protein	84.4	51.6	74.6
MGA_3414	LOCUS_34110	sequence1:3473325..3473495(+)	frameshift		3473210,3473117	WP_003898940.1	methyltransferase domain-containing protein	92.9	20.6	69.2
MGA_3421	LOCUS_34180	sequence1:3479510..3480487(-)	frameshift		3480513	WP_003420618.1	peptidoglycan DD-metalloendopeptidase family protein	99.7	79.6	66.3
MGA_3422	LOCUS_34190	sequence1:3480451..3480780(-)	frameshift		3480513	WP_003420618.1	peptidoglycan DD-metalloendopeptidase family protein	67.0	17.9	67.1
MGA_3428	LOCUS_34250	sequence1:3487492..3488688(-)	frameshift		3488743	WP_003898920.1	fatty-acid--AMP ligase FAAL24/FadD24	100.0	68.0	71.2
MGA_3429	LOCUS_34260	sequence1:3489428..3489658(+)	partial			WP_003898919.1	polyketide synthase	81.6	37.6	53.2
MGA_3432	LOCUS_34290	sequence1:3498706..3502368(+)	frameshift,internal_stop_codon	3498652..3498654(+),3498658..3498660(+)	3502200,3502492	WP_010950554.1	type I polyketide synthase	96.5	56.0	71.1
MGA_3433	LOCUS_34300	sequence1:3502262..3502606(+)	frameshift		3502200,3502492	WP_003913253.1	type I polyketide synthase	64.9	3.5	59.5
MGA_3434	LOCUS_34310	sequence1:3502543..3504948(+)	frameshift		3502492	WP_003913253.1	type I polyketide synthase	99.9	37.8	75.0
MGA_3435	LOCUS_34320	sequence1:3504955..3505788(+)	frameshift		3505807,3505837,3505767	WP_003407676.1	glycosyltransferase	98.9	64.3	74.9
MGA_3436	LOCUS_34330	sequence1:3505785..3506201(+)	frameshift		3505810,3505837,3505767	WP_003407676.1	glycosyltransferase	84.8	27.5	65.8
MGA_3437	LOCUS_34340	sequence1:3506229..3507014(-)	frameshift		3507015	WP_003407670.1	class I SAM-dependent methyltransferase	100.0	75.2	80.8
MGA_3438	LOCUS_34350	sequence1:3507293..3509119(+)	frameshift		3509248,3509050	WP_003901188.1	RND transporter MmpL12	95.1	46.9	65.7
MGA_3439	LOCUS_34360	sequence1:3509258..3510862(+)	frameshift		3509248,3509062	WP_003898915.1	RND transporter MmpL12	94.8	45.1	61.6
MGA_3448	LOCUS_34450	sequence1:3521425..3522030(+)	frameshift		3521979	WP_003918527.1	PGL/p-HBAD biosynthesis glycosyltransferase	91.0	71.5	66.7
MGA_3457	LOCUS_34540	sequence1:3530390..3530824(+)	frameshift		3530725	WP_010937384.1	CDP-glucose 4,6-dehydratase	76.4	29.9	50.5
MGA_3458	LOCUS_34550	sequence1:3530733..3531407(+)	frameshift		3530734	WP_004535171.1	CDP-glucose 4,6-dehydratase	98.7	62.6	49.1
MGA_3460	LOCUS_34570	sequence1:3531915..3532691(+)	frameshift		3532526	WP_003898905.1	glycosyltransferase 87 family protein	79.5	35.1	50.0
MGA_3461	LOCUS_34580	sequence1:3532726..3533295(+)	frameshift		3532529,3533235	WP_003898905.1	glycosyltransferase 87 family protein	76.2	24.2	59.3
MGA_3462	LOCUS_34590	sequence1:3533399..3533851(-)	frameshift		3533858	WP_152827758.1	SDR family oxidoreductase	94.7	51.8	37.4
MGA_3463	LOCUS_34600	sequence1:3533838..3534152(-)	frameshift		3533864	WP_012805189.1	beta-ketoacyl-ACP reductase	93.3	39.4	43.4
MGA_3467	LOCUS_34640	sequence1:3536904..3537818(-)	frameshift		3537925	WP_087902221.1	IS3-like element IS987 family transposase	94.7	65.7	48.1
MGA_3470	LOCUS_34670	sequence1:3538676..3539533(+)	frameshift		3538661	WP_085976939.1	IS3 family transposase	100.0	73.9	90.6
MGA_3471	LOCUS_34680	sequence1:3539890..3540699(-)	frameshift		3540686	WP_003898905.1	glycosyltransferase 87 family protein	85.9	38.2	53.4
MGA_3474	LOCUS_34710	sequence1:3544750..3545541(-)	frameshift		3545539,3545575	WP_003407596.1	methylmalonyl Co-A mutase-associated GTPase MeaB	99.2	78.1	84.7
MGA_3478	LOCUS_34750	sequence1:3550899..3551798(+)	partial			WP_061481638.1	hypothetical protein	69.9	75.9	31.3
MGA_3479	LOCUS_34760	sequence1:3551838..3552857(-)	partial			WP_013225439.1	HAMP domain-containing sensor histidine kinase	97.3	73.5	45.5
MGA_3484	LOCUS_34810	sequence1:3555112..3556104(-)	frameshift		3555351,3556111	WP_003407571.1	SPFH domain-containing protein	76.4	66.1	97.2
MGA_3490	LOCUS_34870	sequence1:3559585..3559806(-)	frameshift		3559783	WP_011728850.1	3-oxoacyl-ACP reductase FabG1	89.0	25.5	93.8
MGA_3505	LOCUS_35020	sequence1:3574728..3576248(-)	frameshift		3576261	WP_003900344.1	cobalt-translocating P-type ATPase CtpD	99.2	76.7	74.4
MGA_3506	LOCUS_35030	sequence1:3576193..3576714(-)	frameshift		3576264	WP_003900344.1	cobalt-translocating P-type ATPase CtpD	89.6	23.6	67.1
MGA_3507	LOCUS_35040	sequence1:3576998..3577960(+)	partial			WP_003407494.1	PE family protein	40.3	34.9	51.9
MGA_3509	LOCUS_35060	sequence1:3580127..3580726(+)	frameshift		3580074	WP_005082270.1	DUF5666 domain-containing protein	99.0	74.2	39.9
MGA_3521	LOCUS_35180	sequence1:3593304..3593621(+)	frameshift		3593287	WP_003407466.1	heme A synthase	99.0	33.5	45.2
MGA_3524	LOCUS_35210	sequence1:3595380..3596150(-)	frameshift		3596151	WP_010886073.1	PPE family protein	78.1	40.5	28.6
MGA_3569	LOCUS_35660	sequence1:3646388..3646612(-)	frameshift		3646761,3646622	WP_011728792.1	methionyl-tRNA formyltransferase	100.0	24.4	73.7
MGA_3570	LOCUS_35670	sequence1:3646609..3647322(-)	frameshift		3646625,3646764	WP_041323689.1	methionyl-tRNA formyltransferase	78.5	58.9	82.8
MGA_3580	LOCUS_35770	sequence1:3658416..3659465(+)	internal_stop_codon	3659463..3659465(+)		WP_013228182.1	fatty acid desaturase	98.3	72.7	57.8
MGA_3586	LOCUS_35830	sequence1:3663738..3664052(-)	frameshift,internal_stop_codon	3664094..3664096(-),3664184..3664186(-)	3664195,3664084,3664237	WP_003898857.1	integration host factor, actinobacterial type	100.0	54.7	85.6
MGA_3594	LOCUS_35910	sequence1:3673821..3676799(+)	partial			WP_011085486.1	hypothetical protein	37.6	35.4	30.6
MGA_3597	LOCUS_35940	sequence1:3678974..3679405(-)	frameshift		3679515,3679412	WP_003898849.1	glycolipid sulfotransferase	95.8	42.0	78.1
MGA_3603	LOCUS_36000	sequence1:3685329..3686114(-)	frameshift,internal_stop_codon	3685329..3685331(-)	3686113	WP_005110750.1	fumarate reductase/succinate dehydrogenase flavoprotein subunit	98.5	28.3	59.3
MGA_3604	LOCUS_36010	sequence1:3686087..3688021(-)	frameshift		3686113	WP_005110750.1	fumarate reductase/succinate dehydrogenase flavoprotein subunit	98.6	71.4	82.5
MGA_3617	LOCUS_36140	sequence1:3702237..3702512(-)	partial			WP_011731181.1	FAD-dependent oxidoreductase	96.7	21.2	61.4
MGA_3618	LOCUS_36150	sequence1:3702637..3703074(-)	partial			WP_011727434.1	membrane protein	86.2	60.6	41.6
MGA_3624	LOCUS_36210	sequence1:3706693..3707715(-)	partial			WP_010950639.1	PecA family PE domain-processing aspartic protease	35.9	21.9	57.4
MGA_3632	LOCUS_36290	sequence1:3714153..3714365(-)	frameshift		3714366	WP_003413190.1	A24 family peptidase	77.1	41.0	68.4
MGA_3640	LOCUS_36370	sequence1:3723211..3723825(+)	frameshift		3722983	WP_003911922.1	DUF2189 domain-containing protein	72.1	45.2	55.1
MGA_3654	LOCUS_36510	sequence1:3740503..3741672(-)	partial			WP_013228570.1	TIGR03619 family F420-dependent LLM class oxidoreductase	58.6	74.3	27.0
MGA_3664	LOCUS_36610	sequence1:3750712..3751842(+)	partial			WP_011727491.1	bifunctional serine/threonine-protein kinase/transporter substrate-binding domain-containing protein	68.6	42.3	57.9
MGA_3667	LOCUS_36640	sequence1:3754950..3756482(-)	frameshift		3755177	WP_003917021.1	ABC transporter substrate-binding protein	86.1	79.5	75.6
MGA_3669	LOCUS_36660	sequence1:3757885..3758793(-)	partial			WP_003413385.1	protein translocase subunit SecD	93.0	49.0	81.9
MGA_3670	LOCUS_36670	sequence1:3758819..3759670(-)	frameshift		3759202,3759172	WP_011728723.1	protein translocase subunit SecD	93.3	37.7	50.4
MGA_3681	LOCUS_36780	sequence1:3770460..3771419(+)	frameshift		3770431	WP_014466614.1	FAD-dependent monooxygenase	96.2	76.5	42.1
MGA_3699	LOCUS_36960	sequence1:3787760..3788461(-)	frameshift,internal_stop_codon	3788174..3788176(-),3788381..3788383(-),3788417..3788419(-)	3787843,3787652,3787653,3787654,3788107,3787821,3787822,3788464,3787861	WP_010886091.1	PE family protein	50.6	19.5	63.6
MGA_3700	LOCUS_36970	sequence1:3788677..3789204(-)	frameshift		3789266	WP_011728697.1	PaaI family thioesterase	100.0	83.3	69.7
MGA_3713	LOCUS_37100	sequence1:3799065..3799646(+)	frameshift		3799048	WP_003403001.1	phosphoribosyltransferase family protein	100.0	42.7	48.2
MGA_3718	LOCUS_37150	sequence1:3803165..3804454(+)	frameshift		3804709,3804325,3804337,3804370,3804340,3804341,3804376,3804346,3804703	WP_010950489.1	PE family protein	33.1	19.1	41.1
MGA_3740	LOCUS_37360	sequence1:3823312..3823872(-)	frameshift		3824083	WP_225580837.1	hypothetical protein	100.0	27.6	63.4
MGA_3741	LOCUS_37370	sequence1:3824039..3825199(-)	frameshift		3824089	WP_225580837.1	hypothetical protein	95.6	54.7	71.0
MGA_3743	LOCUS_37390	sequence1:3826439..3827137(+)	partial			WP_003899455.1	DUF5131 family protein	87.9	71.8	77.0
MGA_3746	LOCUS_37420	sequence1:3830441..3831685(+)	partial			WP_162146334.1	restriction endonuclease subunit S	43.2	45.6	38.9
MGA_3747	LOCUS_37430	sequence1:3831682..3834318(+)	frameshift		3834225	WP_011393172.1	HsdR family type I site-specific deoxyribonuclease	94.8	84.9	42.0
MGA_3749	LOCUS_37450	sequence1:3834646..3835035(+)	partial			WP_011038030.1	SprT family zinc-dependent metalloprotease	46.5	24.2	50.0
MGA_3750	LOCUS_37460	sequence1:3835104..3835901(+)	partial			WP_003975544.1	nucleotide-binding protein	56.2	60.2	44.7
MGA_3758	LOCUS_37540	sequence1:3840059..3841051(+)	partial			WP_013389782.1	site-specific integrase	56.1	80.3	31.6
MGA_3760	LOCUS_37560	sequence1:3841708..3842229(+)	frameshift		3842148,3842172,3841724,3842190	WP_189327688.1	IS21 family transposase	82.1	25.5	50.0
MGA_3761	LOCUS_37570	sequence1:3842247..3843011(+)	frameshift,internal_stop_codon	3842723..3842725(+)	3842193,3842737,3842674,3842154,3842172	WP_189327688.1	IS21 family transposase	72.8	32.9	42.3
MGA_3762	LOCUS_37580	sequence1:3842968..3843648(+)	partial			WP_010974232.1	IS21-like element helper ATPase IstB	67.7	60.7	39.9
MGA_3766	LOCUS_37610	sequence1:3845255..3847516(-)	partial			WP_005110312.1	phage tail tape measure protein	29.1	17.1	37.6
MGA_3767	LOCUS_37620	sequence1:3847775..3848866(-)	partial			WP_011337207.1	phage major capsid protein	64.7	59.1	28.1
MGA_3782	LOCUS_37770	sequence1:3858783..3859085(-)	frameshift,internal_stop_codon	3858608..3858610(-)	3858808,3858658,3858595,3859132	WP_189327688.1	IS21 family transposase	90.0	16.3	50.0
MGA_3783	LOCUS_37780	sequence1:3859103..3860137(-)	frameshift		3859132	WP_189327688.1	IS21 family transposase	97.1	60.0	52.8
MGA_3797	LOCUS_37920	sequence1:3872218..3872571(+)	partial			WP_003894176.1	GNAT family N-acetyltransferase	95.7	63.6	56.2
MGA_3800	LOCUS_37950	sequence1:3874409..3875701(+)	frameshift		3875629,3875654	WP_003413857.1	alpha/beta hydrolase	95.1	77.7	69.7
MGA_3801	LOCUS_37960	sequence1:3875656..3875997(+)	frameshift		3875629,3875654	WP_003413857.1	alpha/beta hydrolase	100.0	21.4	82.3
MGA_3806	LOCUS_38010	sequence1:3879312..3879527(-)	frameshift		3879561,3879730	WP_003413871.1	protoporphyrinogen oxidase	98.6	15.5	74.3
MGA_3807	LOCUS_38020	sequence1:3879614..3880627(-)	frameshift		3879561,3879733	WP_003413871.1	protoporphyrinogen oxidase	88.7	66.2	65.6
MGA_3839	LOCUS_38340	sequence1:3909277..3910443(+)	partial			WP_003900558.1	alpha/beta hydrolase	72.7	82.7	79.8
MGA_3847	LOCUS_38420	sequence1:3917768..3919063(-)	frameshift		3919068,3917862	WP_003413984.1	GTPase HflX	93.5	81.8	85.9
MGA_3860	LOCUS_38550	sequence1:3931326..3931994(+)	partial			WP_010886154.1	PE family protein	36.0	15.2	55.0
MGA_3864	LOCUS_38590	sequence1:3934167..3934877(-)	partial			WP_003414035.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	62.7	70.8	74.3
MGA_3876	LOCUS_38710	sequence1:3946456..3947229(-)	frameshift		3947305	WP_003414068.1	restriction endonuclease subunit S	93.0	65.7	53.6
MGA_3880	LOCUS_38750	sequence1:3950226..3950849(-)	frameshift		3950252	WP_003414075.1	thymidylate synthase	94.7	74.5	92.9
MGA_3884	LOCUS_38790	sequence1:3952969..3953826(-)	frameshift		3953825	WP_003112417.1	pyruvate carboxylase	98.2	25.6	59.6
MGA_3885	LOCUS_38800	sequence1:3953769..3955688(-)	frameshift		3953824,3955699	WP_010921047.1	carboxyl transferase domain-containing protein	96.9	56.5	50.0
MGA_3887	LOCUS_38820	sequence1:3956232..3956480(-)	partial			WP_003906903.1	PPE family protein	92.7	20.4	57.7
MGA_3893	LOCUS_38880	sequence1:3961023..3965369(+)	partial			WP_000686845.1	AAA family ATPase	77.1	66.5	21.8
MGA_3895	LOCUS_38900	sequence1:3966247..3967431(+)	partial			WP_011227641.1	polyprenyl synthetase family protein	70.3	81.5	42.1
MGA_3909	LOCUS_39040	sequence1:3978773..3979735(-)	partial			WP_013230180.1	SDR family oxidoreductase	90.3	52.8	39.6
MGA_3925	LOCUS_39200	sequence1:3995516..3995968(+)	frameshift		3995489,3995923,3995511	WP_003414158.1	DUF3558 family protein	90.7	66.0	70.3
MGA_3926	LOCUS_39210	sequence1:3995962..3996099(+)	frameshift		3995923	WP_010950775.1	DUF3558 family protein	100.0	21.4	91.1
MGA_3939	LOCUS_39340	sequence1:4006945..4009812(-)	partial			WP_003899505.1	translation initiation factor IF-2	65.2	69.2	91.8
MGA_3944	LOCUS_39390	sequence1:4013122..4013622(-)	frameshift		4013780	WP_003899508.1	proline--tRNA ligase	99.4	28.4	85.5
MGA_3945	LOCUS_39400	sequence1:4013517..4014866(-)	frameshift		4013783	WP_003899508.1	proline--tRNA ligase	80.6	62.4	87.3
MGA_3955	LOCUS_39500	sequence1:4026692..4027021(+)	partial			WP_003410095.1	HNH endonuclease signature motif containing protein	55.0	14.1	68.3
MGA_3958	LOCUS_39530	sequence1:4027793..4028215(+)	frameshift		4027769,4028165	WP_012804326.1	ISL3 family transposase	92.1	29.6	67.4
MGA_3959	LOCUS_39540	sequence1:4028209..4028547(+)	frameshift		4028134	WP_011726739.1	ISL3-like element IS1096 family transposase	93.8	24.1	59.4
MGA_3974	LOCUS_39690	sequence1:4043061..4043816(+)	frameshift		4043023	WP_003420557.1	class I SAM-dependent methyltransferase	98.4	78.3	53.4
MGA_3987	LOCUS_39820	sequence1:4056861..4058591(+)	internal_stop_codon	4056822..4056824(+),4056846..4056848(+)		WP_009936521.1	cytochrome c biogenesis protein DipZ	99.7	83.5	70.3
MGA_3992	LOCUS_39870	sequence1:4060899..4061276(-)	frameshift		4061278	WP_003904947.1	cytochrome c biogenesis CcdA family protein	88.8	39.0	53.6
MGA_3993	LOCUS_39880	sequence1:4061273..4061788(-)	frameshift		4061278	WP_003904947.1	cytochrome c biogenesis CcdA family protein	93.0	56.8	72.4
MGA_3996	LOCUS_39910	sequence1:4063497..4064243(-)	frameshift		4064244	WP_003414661.1	phosphatidate cytidylyltransferase	100.0	80.7	74.2
MGA_4002	LOCUS_39970	sequence1:4068487..4069203(-)	partial			WP_011727224.1	MPT63 family protein	82.8	52.8	36.9
MGA_4006	LOCUS_40010	sequence1:4072227..4072853(+)	partial			WP_003414678.1	M23 family metallopeptidase	75.0	62.7	74.4
MGA_4011	LOCUS_40060	sequence1:4076967..4077581(-)	frameshift		4077582	WP_003414700.1	YifB family Mg chelatase-like AAA ATPase	100.0	40.6	71.6
MGA_4019	LOCUS_40140	sequence1:4084213..4084725(-)	frameshift		4084708	WP_010950797.1	signal peptidase I	96.5	55.1	80.5
MGA_4032	LOCUS_40270	sequence1:4094227..4094757(-)	frameshift		4094779	WP_003414748.1	signal recognition particle protein	100.0	34.9	76.0
MGA_4054	LOCUS_40490	sequence1:4120033..4121982(-)	frameshift		4122142	WP_003415003.1	pyruvate carboxylase	98.0	56.4	85.8
MGA_4055	LOCUS_40500	sequence1:4122075..4123430(-)	frameshift		4122341,4122142	WP_003415003.1	pyruvate carboxylase	80.5	32.2	82.1
MGA_4058	LOCUS_40530	sequence1:4124902..4125309(-)	frameshift		4125346	WP_003415015.1	lipase/esterase LipN	99.3	35.6	81.3
MGA_4064	LOCUS_40590	sequence1:4132686..4133330(+)	partial			WP_011727636.1	TetR/AcrR family transcriptional regulator	53.3	48.7	36.2
MGA_4071	LOCUS_40660	sequence1:4142083..4142538(+)	frameshift		4142496,4142793,4142511	WP_011729039.1	HNH endonuclease signature motif containing protein	91.4	33.5	71.0
MGA_4075	LOCUS_40700	sequence1:4144683..4145189(-)	frameshift,internal_stop_codon	4145256..4145258(-)	4145343	WP_005110629.1	plasmid replication initiator protein	91.7	28.1	48.1
MGA_4077	LOCUS_40720	sequence1:4146297..4146599(-)	frameshift		4146776,4146680,4146716,4146631	WP_005110627.1	FtsK/SpoIIIE domain-containing protein	92.0	19.1	80.4
MGA_4078	LOCUS_40730	sequence1:4146720..4147688(-)	frameshift		4146898,4146679,4147046,4146630,4146778,4146715	WP_005110627.1	FtsK/SpoIIIE domain-containing protein	90.7	61.5	49.7
MGA_4079	LOCUS_40740	sequence1:4147955..4148134(-)	frameshift,internal_stop_codon	4147955..4147957(-)	4147912,4147866	WP_005114273.1	hypothetical protein	93.2	48.2	61.8
MGA_4081	LOCUS_40760	sequence1:4149978..4150226(+)	frameshift		4149949	WP_193485703.1	creatininase family protein	97.6	28.7	50.0
MGA_4082	LOCUS_40770	sequence1:4150731..4151135(+)	partial			WP_005111736.1	DUF417 family protein	94.8	73.8	59.8
MGA_4086	LOCUS_40810	sequence1:4153415..4153798(+)	frameshift		4153678,4153703	WP_013230606.1	TetR/AcrR family transcriptional regulator	30.7	19.5	64.1
MGA_4087	LOCUS_40820	sequence1:4153702..4154172(+)	frameshift		4153678,4153703	WP_005115862.1	TetR/AcrR family transcriptional regulator	95.5	71.3	59.7
MGA_4088	LOCUS_40830	sequence1:4154317..4155063(+)	frameshift,internal_stop_codon	4155061..4155063(+)	4155090	WP_167379699.1	haloalkane dehalogenase	100.0	82.4	56.2
MGA_4089	LOCUS_40840	sequence1:4155283..4156146(+)	frameshift,internal_stop_codon	4156144..4156146(+)	4156167	WP_013228603.1	MFS transporter	81.9	60.3	30.3
MGA_4093	LOCUS_40880	sequence1:4158044..4158295(+)	frameshift		4158325,4158502,4158583,4158553,4158283	WP_003419799.1	L-histidine N(alpha)-methyltransferase	96.4	25.2	64.2
MGA_4094	LOCUS_40890	sequence1:4158360..4158611(+)	frameshift		4158502,4158283,4158673,4158610,4158740,4158325,4158583,4158553,4158779,4158813,4158877	WP_003419799.1	L-histidine N(alpha)-methyltransferase	98.8	26.5	45.9
MGA_4095	LOCUS_40900	sequence1:4159215..4159403(-)	frameshift		4159408,4159565,4159589,4159486	WP_003891449.1	haloacid dehalogenase type II	87.1	23.9	55.6
MGA_4096	LOCUS_40910	sequence1:4159923..4160282(-)	frameshift		4160334	WP_013223540.1	nuclear transport factor 2 family protein	75.6	59.2	73.3
MGA_4098	LOCUS_40930	sequence1:4161408..4161734(-)	frameshift		4161729,4161754	WP_197530137.1	ABATE domain-containing protein	91.7	49.3	42.6
MGA_4101	LOCUS_40960	sequence1:4162917..4163264(+)	frameshift		4163195	WP_013225119.1	alpha/beta hydrolase	85.2	41.9	42.9
MGA_4102	LOCUS_40970	sequence1:4163351..4163608(+)	frameshift		4163195	WP_003972011.1	alpha/beta hydrolase	92.9	33.1	36.7
MGA_4103	LOCUS_40980	sequence1:4164203..4164784(-)	partial			WP_001287010.1	carnitine monooxygenase subunit YeaX	92.2	56.7	39.9
MGA_4104	LOCUS_40990	sequence1:4164784..4165158(-)	partial			WP_024265642.1	MOSC domain-containing protein	88.7	43.5	44.5
MGA_4107	LOCUS_41020	sequence1:4165993..4166556(-)	frameshift		4166648,4166599	WP_011089316.1	alpha/beta hydrolase	97.3	64.3	39.9
MGA_4111	LOCUS_41060	sequence1:4168510..4169703(-)	frameshift		4169716	WP_003412946.1	dipeptidase	95.7	80.2	82.6
MGA_4114	LOCUS_41090	sequence1:4172563..4173714(+)	frameshift		4172531	WP_011728918.1	DUF2339 domain-containing protein	100.0	63.3	41.0
MGA_4115	LOCUS_41100	sequence1:4173804..4174961(-)	frameshift		4174998	WP_003899212.1	cytochrome bc complex cytochrome b subunit	99.5	71.0	81.3
MGA_4116	LOCUS_41110	sequence1:4174972..4175394(-)	frameshift		4175004	WP_003899212.1	cytochrome bc complex cytochrome b subunit	90.0	23.0	83.3
MGA_4118	LOCUS_41130	sequence1:4176003..4178297(-)	internal_stop_codon	4178373..4178375(-)		WP_003901420.1	fatty acid synthase	99.0	24.6	86.4
MGA_4119	LOCUS_41140	sequence1:4178373..4185227(-)	internal_stop_codon	4178373..4178375(-)		WP_003900843.1	fatty acid synthase	100.0	74.5	84.4
MGA_4121	LOCUS_41160	sequence1:4186695..4187849(+)	partial			WP_000036619.1	Rieske 2Fe-2S domain-containing protein	60.2	56.5	28.8
MGA_4125	LOCUS_41200	sequence1:4191235..4191690(-)	partial			WP_005064825.1	MaoC family dehydratase	60.3	70.0	39.6
MGA_4133	LOCUS_41280	sequence1:4199292..4200041(+)	partial			WP_003816687.1	SDR family NAD(P)-dependent oxidoreductase	71.1	74.6	39.6
MGA_4141	LOCUS_41360	sequence1:4206994..4208649(-)	partial			WP_005113178.1	MinD/ParA family protein	59.0	52.7	65.2
MGA_4152	LOCUS_41470	sequence1:4216341..4217312(-)	frameshift		4217419	WP_005113177.1	MinD/ParA family protein	96.0	29.8	77.7
MGA_4154	LOCUS_41490	sequence1:4220305..4221780(-)	partial			WP_013222634.1	type VII secretion integral membrane protein EccD	59.9	64.8	26.2
MGA_4158	LOCUS_41530	sequence1:4229226..4230740(+)	frameshift		4229221	WP_005094468.1	type VII secretion protein EccE	89.9	82.2	31.6
MGA_4162	LOCUS_41570	sequence1:4233094..4233411(+)	partial			WP_003899734.1	transcriptional regulator WhiB6	75.2	67.2	70.9
MGA_4166	LOCUS_41610	sequence1:4235208..4236281(-)	frameshift		4235243	WP_162139572.1	hypothetical protein	76.2	67.7	31.0
MGA_4170	LOCUS_41650	sequence1:4239551..4240471(+)	partial			WP_003404782.1	serine/threonine protein kinase PknD	83.3	38.9	46.3
MGA_4179	LOCUS_41740	sequence1:4249900..4250796(+)	partial			WP_003407157.1	membrane protein	61.1	69.0	67.6
MGA_4180	LOCUS_41750	sequence1:4250793..4251686(+)	partial			WP_003407152.1	membrane protein	62.0	83.2	71.2
MGA_4191	LOCUS_41860	sequence1:4263485..4264618(-)	partial			WP_010886153.1	alpha/beta hydrolase	76.4	70.5	29.8
MGA_4204	LOCUS_41990	sequence1:4277902..4278951(-)	frameshift		4278967	WP_011728238.1	acyl-CoA synthetase	99.4	64.8	72.6
MGA_4222	LOCUS_42170	sequence1:4297440..4298330(+)	frameshift		4298534,4298327	WP_003898743.1	HNH endonuclease signature motif containing protein	100.0	65.2	52.9
MGA_4223	LOCUS_42180	sequence1:4298979..4299218(-)	frameshift		4299357	WP_003893583.1	GntR family transcriptional regulator	84.8	30.2	56.7
MGA_4224	LOCUS_42190	sequence1:4299298..4299687(-)	frameshift,internal_stop_codon	4299360..4299362(-)	4299363	WP_003893583.1	GntR family transcriptional regulator	84.5	49.1	78.9
MGA_4230	LOCUS_42250	sequence1:4305366..4305530(+)	partial			WP_010950528.1	LuxR family transcriptional regulator	75.9	3.5	73.2
MGA_4233	LOCUS_42280	sequence1:4308502..4310538(-)	frameshift		4310539,4310663	WP_003406958.1	iron ABC transporter ATP-binding protein/permease IrtA	99.7	78.6	70.4
MGA_4234	LOCUS_42290	sequence1:4310628..4311086(-)	frameshift		4310539,4310663	WP_003406958.1	iron ABC transporter ATP-binding protein/permease IrtA	92.8	16.4	79.4
MGA_4244	LOCUS_42380	sequence1:4317802..4318170(-)	frameshift		4318162	WP_003406922.1	MBL fold metallo-hydrolase	98.4	44.0	86.7
MGA_4246	LOCUS_42400	sequence1:4319389..4319967(-)	frameshift		4320010,4319610	WP_003898831.1	rhomboid family intramembrane serine protease	66.7	55.0	78.0
MGA_4249	LOCUS_42430	sequence1:4321914..4322135(-)	partial			WP_003896307.1	ATP-dependent Clp protease adapter ClpS	100.0	73.0	93.2
MGA_4252	LOCUS_42460	sequence1:4325566..4326648(-)	frameshift		4326884	WP_003901135.1	glycosyltransferase family 1 protein	100.0	41.1	83.9
MGA_4253	LOCUS_42470	sequence1:4326678..4328159(-)	frameshift		4326884	WP_003901135.1	glycosyltransferase family 1 protein	86.2	49.8	83.7
MGA_4254	LOCUS_42480	sequence1:4328515..4328766(+)	frameshift		4328498,4328739	WP_003406897.1	alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase	92.8	9.6	53.2
MGA_4255	LOCUS_42490	sequence1:4328777..4330531(+)	frameshift		4328498,4328739	WP_003406897.1	alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase	100.0	83.3	87.7
MGA_4264	LOCUS_42580	sequence1:4339029..4339889(+)	frameshift		4340112,4339751	WP_003900313.1	bifunctional regulatory protein/DNA repair enzyme AlkA	85.3	49.2	84.4
MGA_4265	LOCUS_42590	sequence1:4339798..4340229(+)	frameshift		4340115,4339751	WP_003900313.1	bifunctional regulatory protein/DNA repair enzyme AlkA	74.1	21.4	83.0
MGA_4266	LOCUS_42600	sequence1:4340120..4340530(+)	frameshift		4340115	WP_003900313.1	bifunctional regulatory protein/DNA repair enzyme AlkA	93.4	25.6	77.2
MGA_4268	LOCUS_42620	sequence1:4346605..4347528(-)	frameshift		4347538	WP_003406845.1	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	99.7	73.2	95.1
MGA_4270	LOCUS_42640	sequence1:4348509..4348901(-)	partial			WP_012805134.1	TM2 domain-containing protein	98.5	46.2	40.1
MGA_4298	LOCUS_42920	sequence1:4372609..4373838(-)	partial			WP_011975373.1	DNA cytosine methyltransferase	73.1	45.3	34.7
MGA_4310	LOCUS_43040	sequence1:4381795..4383189(-)	partial			WP_010888648.1	NAD(P)/FAD-dependent oxidoreductase	34.3	37.1	35.1
MGA_4314	LOCUS_43080	sequence1:4385617..4386366(+)	partial			WP_005093533.1	hypothetical protein	62.7	80.3	33.1
MGA_4327	LOCUS_43210	sequence1:4396197..4396661(+)	partial			WP_011727993.1	M15 family metallopeptidase	89.0	74.1	61.3
MGA_4331	LOCUS_43250	sequence1:4398839..4400839(+)	partial			WP_011144393.1	potassium channel protein	75.7	73.4	27.5
MGA_4339	LOCUS_43330	sequence1:4409470..4416978(+)	partial			WP_010886138.1	type I polyketide synthase	81.5	48.6	50.0
MGA_4340	LOCUS_43340	sequence1:4416971..4418311(+)	frameshift		4418110,4416942	WP_003113143.1	non-ribosomal peptide synthetase	92.8	17.6	51.2
MGA_4341	LOCUS_43350	sequence1:4418232..4422788(+)	frameshift		4422320,4418116,4418110,4422765,4422750,4422335	WP_003113143.1	non-ribosomal peptide synthetase	48.2	31.5	41.2
MGA_4342	LOCUS_43360	sequence1:4422788..4424314(+)	frameshift		4422765,4422750	WP_003113143.1	non-ribosomal peptide synthetase	97.2	21.1	45.1
MGA_4343	LOCUS_43370	sequence1:4424531..4425001(+)	frameshift		4424592,4424887	WP_003091709.1	NAD(P)/FAD-dependent oxidoreductase	69.9	27.6	41.2
MGA_4344	LOCUS_43380	sequence1:4424952..4425473(+)	frameshift		4424887	WP_003091709.1	NAD(P)/FAD-dependent oxidoreductase	95.4	42.5	55.8
MGA_4350	LOCUS_43440	sequence1:4433644..4434213(+)	frameshift		4434153,4434187	WP_003406613.1	ABC transporter permease	89.9	52.3	71.2
MGA_4351	LOCUS_43450	sequence1:4434198..4434620(+)	frameshift		4434187,4434156	WP_003406613.1	ABC transporter permease	100.0	43.1	80.0
MGA_4372	LOCUS_43660	sequence1:4458463..4458888(+)	frameshift		4458434	WP_023853463.1	TetR/AcrR family transcriptional regulator	83.7	52.2	36.4
MGA_4373	LOCUS_43670	sequence1:4458928..4459896(-)	partial			WP_010871010.1	NAD(P)-binding protein	57.5	43.3	21.6
MGA_4376	LOCUS_43700	sequence1:4461549..4462628(-)	frameshift		4461668	WP_011729714.1	enoyl-CoA hydratase-related protein	55.2	78.2	33.5
MGA_4381	LOCUS_43750	sequence1:4466842..4468068(-)	partial			WP_011729365.1	phosphotransferase	43.9	26.5	26.7
MGA_4388	LOCUS_43820	sequence1:4472585..4473397(-)	frameshift		4472692	WP_011729365.1	phosphotransferase	81.9	33.3	30.4
MGA_4392	LOCUS_43860	sequence1:4476196..4477326(+)	partial			WP_011729365.1	phosphotransferase	90.4	49.9	27.9
MGA_4394	LOCUS_43880	sequence1:4477791..4478582(+)	frameshift		4477759	WP_011029132.1	cytochrome P450	93.2	58.6	34.7
MGA_4397	LOCUS_43910	sequence1:4480105..4480686(-)	frameshift		4480768	WP_011731549.1	spirocyclase AveC family protein	91.2	46.1	26.1
MGA_4400	LOCUS_43940	sequence1:4483511..4484482(-)	frameshift		4484535	WP_011027647.1	acyl-CoA dehydrogenase	98.1	80.4	59.6
MGA_4403	LOCUS_43970	sequence1:4485956..4486669(-)	frameshift		4486712	WP_011085689.1	cytochrome P450	92.0	53.0	34.2
MGA_4404	LOCUS_43980	sequence1:4486686..4487099(-)	frameshift		4486730	WP_014857647.1	cytochrome P450	69.3	24.4	40.8
MGA_4407	LOCUS_44010	sequence1:4488541..4489311(-)	partial			WP_000437792.1	tyrosine-protein phosphatase	92.2	74.7	27.2
MGA_4408	LOCUS_44020	sequence1:4489304..4492081(-)	partial			WP_011250243.1	phosphoenolpyruvate synthase	34.4	42.1	46.6
MGA_4409	LOCUS_44030	sequence1:4492113..4492298(-)	frameshift		4492303	WP_011140397.1	NAD(P)/FAD-dependent oxidoreductase	68.9	7.3	54.8
MGA_4411	LOCUS_44050	sequence1:4492927..4493709(-)	frameshift		4493001	WP_011727106.1	NAD(P)/FAD-dependent oxidoreductase	76.2	36.9	34.0
MGA_4418	LOCUS_44120	sequence1:4500313..4500846(-)	partial			WP_013227078.1	MarR family transcriptional regulator	72.3	73.3	50.4
MGA_4420	LOCUS_44140	sequence1:4503175..4504173(+)	frameshift		4503176,4504119	WP_011731549.1	spirocyclase AveC family protein	94.9	81.9	44.3
MGA_4424	LOCUS_44180	sequence1:4507028..4508686(+)	partial			WP_003231379.1	phosphoenolpyruvate synthase	54.0	34.6	26.8
MGA_4427	LOCUS_44210	sequence1:4510770..4512368(-)	partial			WP_011022429.1	phosphoenolpyruvate synthase	63.9	38.5	30.4
MGA_4438	LOCUS_44320	sequence1:4522993..4523397(-)	frameshift		4523437	WP_150135106.1	hypothetical protein	61.9	33.9	43.4
MGA_4443	LOCUS_44370	sequence1:4527022..4527633(-)	partial			WP_014877271.1	LLM class F420-dependent oxidoreductase	81.8	67.0	37.1
MGA_4445	LOCUS_44390	sequence1:4529473..4530129(+)	partial			WP_003893315.1	TetR/AcrR family transcriptional regulator	69.7	67.6	29.6
MGA_4446	LOCUS_44400	sequence1:4530146..4531540(+)	partial			WP_036462182.1	Rieske 2Fe-2S domain-containing protein	35.3	47.9	31.2
MGA_4448	LOCUS_44420	sequence1:4531999..4533261(+)	partial			WP_013224859.1	helix-turn-helix domain-containing protein	72.9	72.7	26.6
MGA_4463	LOCUS_44570	sequence1:4547809..4549008(+)	partial			WP_201372230.1	phosphoenolpyruvate synthase	72.2	33.6	29.3
MGA_4468	LOCUS_44620	sequence1:4552155..4552886(-)	frameshift		4552926	WP_010926609.1	SDR family NAD(P)-dependent oxidoreductase	90.9	82.5	38.1
MGA_4471	LOCUS_44650	sequence1:4555542..4556288(-)	frameshift		4556515,4556340	WP_005094688.1	sulfotransferase	97.2	56.5	30.6
MGA_4473	LOCUS_44670	sequence1:4556797..4558065(-)	partial			WP_013224715.1	hypothetical protein	73.2	80.8	25.5
MGA_4474	LOCUS_44680	sequence1:4558131..4558754(+)	partial			WP_005087056.1	TetR/AcrR family transcriptional regulator	74.4	69.1	28.8
MGA_4485	LOCUS_44790	sequence1:4567353..4567919(+)	partial			WP_011729564.1	3-oxoacyl-ACP reductase FabG	99.5	74.0	40.0
MGA_4486	LOCUS_44800	sequence1:4567949..4569607(-)	partial			WP_010963855.1	phosphoenolpyruvate synthase	52.4	33.5	31.1
MGA_4489	LOCUS_44830	sequence1:4571270..4571629(-)	frameshift		4571762,4571452	WP_038965213.1	long-chain fatty acid--CoA ligase	88.2	17.1	41.9
MGA_4490	LOCUS_44840	sequence1:4571601..4572839(-)	frameshift		4571452,4571765	WP_038965213.1	long-chain fatty acid--CoA ligase	87.1	68.6	39.8
MGA_4497	LOCUS_44910	sequence1:4579543..4579866(-)	frameshift		4579873	WP_011085689.1	cytochrome P450	86.0	22.4	42.4
MGA_4498	LOCUS_44920	sequence1:4579832..4580779(-)	frameshift		4580560,4579872,4580520	WP_011085689.1	cytochrome P450	89.8	71.9	29.2
MGA_4500	LOCUS_44940	sequence1:4582112..4582756(-)	frameshift		4582159	WP_010974232.1	IS21-like element helper ATPase IstB	85.5	72.6	36.1
MGA_4502	LOCUS_44960	sequence1:4583061..4584416(-)	frameshift,internal_stop_codon	4582887..4582889(-)	4583081,4582874,4582937	WP_189327688.1	IS21 family transposase	98.4	79.9	52.8
MGA_4507	LOCUS_45010	sequence1:4587929..4588417(+)	partial			WP_038967283.1	MaoC family dehydratase	62.3	69.3	39.4
MGA_4509	LOCUS_45030	sequence1:4589451..4590002(-)	partial			WP_013531570.1	TetR/AcrR family transcriptional regulator C-terminal domain-containing protein	82.0	67.1	29.3
MGA_4517	LOCUS_45110	sequence1:4596625..4597716(+)	partial			WP_133414121.1	phosphotransferase	99.7	53.0	35.4
MGA_4519	LOCUS_45130	sequence1:4598907..4599482(+)	partial			WP_013223519.1	TetR/AcrR family transcriptional regulator C-terminal domain-containing protein	99.0	68.8	29.1
MGA_4536	LOCUS_45300	sequence1:4615352..4615768(-)	partial			WP_000211158.1	aromatic ring-hydroxylating dioxygenase subunit alpha	58.7	17.9	42.0
MGA_4537	LOCUS_45310	sequence1:4616098..4617378(+)	partial			WP_013228930.1	cytochrome P450	59.9	62.2	33.6
MGA_4546	LOCUS_45400	sequence1:4627488..4628585(+)	frameshift		4627438,4627471	WP_038965213.1	long-chain fatty acid--CoA ligase	94.8	67.6	38.2
MGA_4547	LOCUS_45410	sequence1:4628597..4629310(-)	partial			WP_005083306.1	TetR/AcrR family transcriptional regulator C-terminal domain-containing protein	40.9	43.7	30.9
MGA_4551	LOCUS_45450	sequence1:4632663..4632962(+)	partial			WP_011142684.1	glycerol-3-phosphate acyltransferase	43.4	4.6	65.1
MGA_4553	LOCUS_45470	sequence1:4634769..4635323(-)	partial			WP_003977123.1	TetR/AcrR family transcriptional regulator	79.3	69.0	32.0
MGA_4556	LOCUS_45500	sequence1:4637496..4638554(+)	partial			WP_133414121.1	phosphotransferase	98.9	51.9	30.3
MGA_4558	LOCUS_45520	sequence1:4639184..4639969(-)	frameshift		4639997,4640079	WP_011726962.1	RND family transporter	97.3	27.8	74.9
MGA_4559	LOCUS_45530	sequence1:4639972..4642050(-)	frameshift		4640000,4640079	WP_005112285.1	RND family transporter	97.5	69.9	64.3
MGA_4568	LOCUS_45620	sequence1:4650660..4651892(+)	frameshift		4651634	WP_014876999.1	cytochrome P450	87.8	76.8	65.6
MGA_4577	LOCUS_45710	sequence1:4659507..4660253(+)	frameshift		4659510	WP_004194683.1	hypothetical protein	89.5	82.6	36.2
MGA_4579	LOCUS_45730	sequence1:4661112..4661600(+)	partial			WP_011730164.1	phosphotransferase	84.0	37.2	44.9
MGA_4587	LOCUS_45810	sequence1:4666890..4667852(-)	partial			WP_013225667.1	LLM class flavin-dependent oxidoreductase	60.3	51.0	34.5
MGA_4588	LOCUS_45820	sequence1:4667852..4668868(-)	frameshift		4668867	WP_012546471.1	acyl-CoA dehydrogenase family protein	88.5	79.0	31.1
MGA_4598	LOCUS_45920	sequence1:4678006..4679172(+)	partial			WP_011140397.1	NAD(P)/FAD-dependent oxidoreductase	88.1	61.3	28.4
MGA_4604	LOCUS_45980	sequence1:4686559..4687002(+)	frameshift		4686559,4686406,4686487	WP_162600456.1	isobutyryl-CoA dehydrogenase	95.9	36.8	49.6
MGA_4605	LOCUS_45990	sequence1:4687489..4687935(+)	frameshift		4687433	WP_005112994.1	LLM class F420-dependent oxidoreductase	95.3	45.4	33.8
MGA_4606	LOCUS_46000	sequence1:4688024..4689229(-)	frameshift		4689245	WP_003404631.1	FAD-dependent oxidoreductase	98.3	67.5	44.6
MGA_4607	LOCUS_46010	sequence1:4689129..4689686(-)	frameshift,internal_stop_codon	4689386..4689388(-)	4689440,4689364,4689247	WP_032668362.1	FAD-dependent oxidoreductase	87.0	27.7	42.2
MGA_4615	LOCUS_46090	sequence1:4697359..4698897(-)	partial			WP_003410309.1	sugar epimerase family protein	66.6	36.3	31.7
MGA_4618	LOCUS_46120	sequence1:4701030..4701638(+)	partial			WP_011205445.1	hypothetical protein	78.2	58.1	35.0
MGA_4631	LOCUS_46250	sequence1:4712418..4712621(+)	frameshift		4712305,4712405,4712143	WP_005083597.1	isoprenylcysteine carboxylmethyltransferase family protein	95.5	31.4	68.8
MGA_4632	LOCUS_46260	sequence1:4712752..4713186(+)	partial			WP_005112726.1	metalloregulator ArsR/SmtB family transcription factor	68.8	76.7	70.7
MGA_4636	LOCUS_46300	sequence1:4717733..4718011(+)	frameshift		4718005	WP_003100957.1	CDF family zinc transporter CzcD	98.9	27.1	48.4
MGA_4637	LOCUS_46310	sequence1:4717992..4718651(+)	frameshift		4718008	WP_013229548.1	cation diffusion facilitator family transporter	92.2	66.3	52.7
MGA_4644	LOCUS_46380	sequence1:4725611..4727335(-)	partial			WP_010967670.1	nitric oxide reductase activation protein NorD	58.9	55.5	30.9
MGA_4653	LOCUS_46470	sequence1:4734510..4735688(-)	frameshift		4734653,4735686,4734535	WP_011730024.1	wax ester/triacylglycerol synthase family O-acyltransferase	87.2	71.3	37.7
MGA_4655	LOCUS_46490	sequence1:4736987..4737784(+)	partial			WP_013222231.1	tetratricopeptide repeat protein	85.7	63.7	36.8
MGA_4659	LOCUS_46530	sequence1:4740721..4741539(+)	frameshift		4740671	WP_013225725.1	acyl-CoA reductase	91.9	51.7	39.1
MGA_4669	LOCUS_46630	sequence1:4750413..4751027(-)	partial			WP_003410309.1	sugar epimerase family protein	99.5	23.5	40.4
MGA_4670	LOCUS_46640	sequence1:4750915..4753017(-)	partial			WP_052846514.1	pyruvate, water dikinase	44.9	40.8	38.4
MGA_4673	LOCUS_46670	sequence1:4754601..4758140(+)	partial			WP_011763610.1	phosphoenolpyruvate synthase	24.3	36.7	39.6
MGA_4674	LOCUS_46680	sequence1:4758144..4759838(-)	partial			WP_010963855.1	phosphoenolpyruvate synthase	42.7	26.6	28.3
MGA_4677	LOCUS_46710	sequence1:4762420..4763193(+)	partial			WP_013225712.1	3-oxoacyl-ACP reductase FabG	71.2	75.3	37.0
MGA_4678	LOCUS_46720	sequence1:4763260..4763871(+)	partial			WP_010972840.1	TetR family transcriptional regulator	29.6	30.0	52.4
MGA_4679	LOCUS_46730	sequence1:4763899..4765113(-)	partial			WP_010878566.1	5,10-methylenetetrahydromethanopterin reductase	60.6	69.6	24.5
MGA_4680	LOCUS_46740	sequence1:4765169..4765759(+)	partial			WP_013223605.1	TetR/AcrR family transcriptional regulator	55.6	54.8	31.2
MGA_4683	LOCUS_46770	sequence1:4767084..4767308(-)	frameshift		4767303	WP_005093535.1	cytochrome c oxidase subunit 3	94.6	38.9	55.7
MGA_4690	LOCUS_46840	sequence1:4773759..4775369(-)	partial			WP_011022429.1	phosphoenolpyruvate synthase	55.0	32.6	32.2
MGA_4697	LOCUS_46910	sequence1:4781426..4783024(+)	partial			WP_003410309.1	sugar epimerase family protein	53.0	30.4	34.4
MGA_4698	LOCUS_46920	sequence1:4783064..4784470(-)	frameshift		4784570	WP_011727041.1	MMPL family transporter	99.8	48.8	59.6
MGA_4699	LOCUS_46930	sequence1:4784355..4785935(-)	frameshift		4784570	WP_011727041.1	MMPL family transporter	85.4	46.6	65.5
MGA_4700	LOCUS_46940	sequence1:4786203..4787831(-)	partial			WP_041272585.1	PEP/pyruvate-binding domain-containing protein	53.1	33.4	31.5
MGA_4706	LOCUS_47000	sequence1:4793292..4793564(-)	partial			WP_064244527.1	epoxide hydrolase	97.8	20.0	50.0
MGA_4707	LOCUS_47010	sequence1:4793564..4794433(-)	frameshift		4793748,4793797	WP_003898281.1	epoxide hydrolase	69.9	53.5	61.4
MGA_4710	LOCUS_47040	sequence1:4797004..4799613(-)	partial			WP_052846514.1	pyruvate, water dikinase	36.7	41.3	40.2
MGA_4712	LOCUS_47060	sequence1:4800653..4801723(-)	partial			WP_011461391.1	hypothetical protein	73.0	70.8	46.9
MGA_4715	LOCUS_47090	sequence1:4802690..4803949(-)	frameshift		4803959	WP_003400974.1	aldehyde dehydrogenase family protein	100.0	84.4	56.5
MGA_4725	LOCUS_47190	sequence1:4812988..4814130(-)	partial			WP_011030901.1	TIGR03842 family LLM class F420-dependent oxidoreductase	53.4	57.1	26.8
MGA_4726	LOCUS_47200	sequence1:4814176..4814760(-)	partial			WP_024504795.1	TetR/AcrR family transcriptional regulator	24.7	22.9	45.8
MGA_4727	LOCUS_47210	sequence1:4814867..4815157(-)	partial			WP_010878190.1	acyl-CoA synthetase	88.5	15.5	41.2
MGA_4728	LOCUS_47220	sequence1:4815081..4816562(-)	frameshift		4815368	WP_010876295.1	AMP-binding protein	80.3	72.3	28.7
MGA_4731	LOCUS_47250	sequence1:4818457..4819101(-)	partial			WP_003113746.1	TetR/AcrR family transcriptional regulator	46.3	50.5	39.4
MGA_4733	LOCUS_47270	sequence1:4820466..4820747(+)	frameshift		4820509	WP_003895997.1	cytochrome P450	67.7	14.8	54.0
MGA_4734	LOCUS_47280	sequence1:4820811..4821215(+)	frameshift		4821185	WP_014876664.1	TetR/AcrR family transcriptional regulator	93.3	64.4	64.8
MGA_4735	LOCUS_47290	sequence1:4821136..4821414(+)	frameshift		4821185	WP_014876664.1	TetR/AcrR family transcriptional regulator	59.8	28.4	60.0
MGA_4736	LOCUS_47300	sequence1:4821373..4822050(-)	partial			WP_038060574.1	TetR/AcrR family transcriptional regulator	64.0	68.4	34.0
MGA_4759	LOCUS_47530	sequence1:4843282..4843761(-)	frameshift		4843744	WP_015439062.1	IS21-like element helper ATPase IstB	74.8	45.9	43.7
MGA_4760	LOCUS_47540	sequence1:4843670..4844059(-)	frameshift		4843753,4843750	WP_010974232.1	IS21-like element helper ATPase IstB	72.1	36.9	37.6
MGA_4761	LOCUS_47550	sequence1:4844016..4844777(-)	frameshift,internal_stop_codon	4844300..4844302(-)	4844872,4844350,4844287	WP_189327688.1	IS21 family transposase	76.7	34.5	41.4
MGA_4762	LOCUS_47560	sequence1:4844837..4845325(-)	frameshift		4845324,4844877	WP_189327688.1	IS21 family transposase	93.2	27.1	50.3
MGA_4763	LOCUS_47570	sequence1:4845265..4845828(-)	frameshift		4845324	WP_189327688.1	IS21 family transposase	89.3	30.0	56.5
MGA_4769	LOCUS_47630	sequence1:4851899..4852528(+)	frameshift		4852522	WP_003420783.1	alpha/beta hydrolase family protein	96.7	69.2	64.4
MGA_4770	LOCUS_47640	sequence1:4852539..4852790(+)	frameshift		4852522	WP_011731260.1	alpha/beta hydrolase family protein	97.6	27.0	49.4
MGA_4772	LOCUS_47660	sequence1:4853542..4854057(+)	partial			WP_003899112.1	CAP domain-containing protein	84.8	65.6	55.9
MGA_4776	LOCUS_47700	sequence1:4856723..4857604(-)	frameshift		4857685,4857829	WP_011726871.1	MlaD family protein	98.3	57.0	50.0
MGA_4777	LOCUS_47710	sequence1:4857788..4858231(-)	frameshift		4857844,4857685	WP_003911732.1	MlaD family protein	87.8	29.5	54.3
MGA_4779	LOCUS_47730	sequence1:4859381..4860622(-)	frameshift		4860596,4859614	WP_003899106.1	virulence factor Mce family protein	94.9	83.7	56.1
MGA_4781	LOCUS_47750	sequence1:4862195..4862692(-)	frameshift		4862748	WP_003899104.1	virulence factor Mce family protein	100.0	48.2	55.8
MGA_4782	LOCUS_47760	sequence1:4862731..4863225(-)	frameshift		4862751	WP_003899104.1	virulence factor Mce family protein	98.2	47.1	56.5
MGA_4789	LOCUS_47830	sequence1:4870365..4871576(+)	frameshift		4871312	WP_010950514.1	serine/threonine-protein kinase PknH/PknJ	73.4	49.7	88.9
MGA_4790	LOCUS_47840	sequence1:4871576..4872181(+)	frameshift		4871974,4871935	WP_005088797.1	hypothetical protein	74.6	50.2	34.2
MGA_4791	LOCUS_47850	sequence1:4872243..4874024(+)	frameshift		4874231	WP_010886110.1	serine/threonine protein kinase PknH	62.2	54.2	64.8
MGA_4793	LOCUS_47870	sequence1:4876128..4876694(-)	frameshift,internal_stop_codon	4876713..4876715(-)	4876722	WP_003406375.1	transcriptional regulator AbmR	95.7	79.6	75.0
MGA_4798	LOCUS_47920	sequence1:4879990..4881930(+)	partial			WP_011030279.1	cyclic Di-GMP phosphodiesterase RmdB	67.3	56.7	39.5
MGA_4809	LOCUS_48030	sequence1:4893596..4897816(-)	partial			WP_010950639.1	PecA family PE domain-processing aspartic protease	8.6	21.7	45.5
MGA_4814	LOCUS_48080	sequence1:4900785..4902710(+)	frameshift		4902686	WP_003406332.1	TM0106 family RecB-like putative nuclease	98.0	55.1	72.6
MGA_4815	LOCUS_48090	sequence1:4902707..4904185(+)	frameshift		4902686	WP_010908128.1	TM0106 family RecB-like putative nuclease	98.6	42.3	71.0
MGA_4818	LOCUS_48120	sequence1:4907217..4907570(+)	frameshift		4907423	WP_010908126.1	multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit	61.5	5.8	69.4
MGA_4819	LOCUS_48130	sequence1:4907455..4910085(+)	frameshift		4907420	WP_010950509.1	multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit	93.7	66.0	90.0
MGA_4820	LOCUS_48140	sequence1:4910109..4910885(+)	partial			WP_010908126.1	multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit	99.6	20.7	88.7
MGA_4826	LOCUS_48200	sequence1:4916627..4916983(-)	frameshift		4917002,4916996	WP_011730287.1	suppressor of fused domain protein	93.2	55.2	68.5
MGA_4829	LOCUS_48230	sequence1:4919201..4919884(-)	partial			WP_003406295.1	trehalose ABC transporter permease SugA	98.7	73.0	80.8
MGA_4833	LOCUS_48270	sequence1:4922166..4922672(+)	partial			WP_005110089.1	DUF4190 domain-containing protein	56.5	41.2	42.1
MGA_4835	LOCUS_48290	sequence1:4924208..4924582(+)	frameshift		4924173	WP_005060011.1	DUF1003 domain-containing protein	86.3	66.0	76.6
MGA_4836	LOCUS_48300	sequence1:4924834..4926165(+)	frameshift		4926000	WP_010950506.1	lytic transglycosylase domain-containing protein	82.8	83.9	64.4
MGA_4842	LOCUS_48360	sequence1:4931684..4932898(-)	frameshift		4932875	WP_003403850.1	phosphoglycerate mutase PE_PGRS11	75.7	53.6	54.9
MGA_4848	LOCUS_48420	sequence1:4939693..4940643(+)	frameshift		4939601	WP_003898773.1	glycogen synthase	99.7	81.4	78.7
MGA_4851	LOCUS_48450	sequence1:4941587..4941952(-)	partial			WP_010908107.1	DivIVA domain-containing protein	66.9	71.1	81.5
MGA_4855	LOCUS_48490	sequence1:4946217..4947425(-)	frameshift		4947453	WP_003406240.1	long-chain-acyl-CoA synthetase FadD6	100.0	67.3	80.3
MGA_4864	LOCUS_48580	sequence1:4956114..4956926(-)	frameshift		4956964,4956951	WP_005111115.1	cytochrome c oxidase assembly protein	99.3	82.2	57.8
MGA_4865	LOCUS_48590	sequence1:4957262..4957663(+)	frameshift		4957627	WP_010908550.1	VWA domain-containing protein	91.7	36.4	55.7
MGA_4866	LOCUS_48600	sequence1:4957711..4958283(+)	frameshift		4957627	WP_010908550.1	VWA domain-containing protein	92.6	51.3	58.5
MGA_4870	LOCUS_48640	sequence1:4961752..4963296(-)	frameshift		4963343	WP_011730132.1	CoA transferase	98.8	69.3	37.0
MGA_4871	LOCUS_48650	sequence1:4963254..4963973(-)	partial			WP_024265979.1	CaiB/BaiF CoA-transferase family protein	83.3	51.4	36.3
MGA_4872	LOCUS_48660	sequence1:4963970..4964245(-)	frameshift		4964370,4964348,4964342	WP_004192785.1	aldehyde dehydrogenase family protein	91.2	17.4	58.3
MGA_4873	LOCUS_48670	sequence1:4964233..4965426(-)	frameshift		4964354,4964367	WP_003897260.1	aldehyde dehydrogenase	91.4	74.6	41.8
MGA_4876	LOCUS_48700	sequence1:4968023..4968565(+)	frameshift		4968559	WP_013224382.1	OB-fold domain-containing protein	88.3	50.3	43.8
MGA_4877	LOCUS_48710	sequence1:4968565..4968963(+)	frameshift		4968559	WP_013224382.1	OB-fold domain-containing protein	97.0	42.1	47.3
MGA_4881	LOCUS_48750	sequence1:4971703..4972335(+)	partial			WP_011393845.1	TetR/AcrR family transcriptional regulator	66.2	72.1	28.3
MGA_4890	LOCUS_48840	sequence1:4984093..4984266(+)	partial			WP_005081166.1	hypothetical protein	54.4	60.8	67.7
MGA_4898	LOCUS_48920	sequence1:4993423..4993794(+)	partial			WP_218060570.1	GNAT family N-acetyltransferase	82.1	55.3	40.8
MGA_4909	LOCUS_49030	sequence1:5004098..5005192(-)	partial			WP_010950346.1	PE family protein	56.6	34.8	32.7
MGA_4911	LOCUS_49050	sequence1:5006205..5007602(-)	partial			WP_003898753.1	PE family protein	38.3	57.5	39.7
MGA_4919	LOCUS_49130	sequence1:5015690..5016010(+)	frameshift		5015635,5015445,5015607,5015608,5015497	WP_003406066.1	hypothetical protein	91.5	26.1	88.7
MGA_4923	LOCUS_49170	sequence1:5017095..5017241(-)	frameshift		5017270	WP_003406060.1	PPOX class F420-dependent oxidoreductase	100.0	32.7	89.6
MGA_4924	LOCUS_49180	sequence1:5017229..5017537(-)	frameshift		5017270	WP_003898745.1	PPOX class F420-dependent oxidoreductase	85.3	59.2	86.2
MGA_4925	LOCUS_49190	sequence1:5017593..5018108(+)	frameshift		5017592,5017556	WP_009936776.1	DUF1697 domain-containing protein	100.0	82.6	71.6
MGA_4927	LOCUS_49210	sequence1:5018726..5019058(+)	frameshift		5018691,5018983	WP_003406044.1	NAD-dependent protein deacylase	79.1	36.7	79.3
MGA_4928	LOCUS_49220	sequence1:5018986..5019255(+)	frameshift		5018983	WP_003406044.1	NAD-dependent protein deacylase	83.1	31.2	79.7
MGA_4931	LOCUS_49250	sequence1:5020581..5021933(-)	frameshift		5021937,5020628,5020694	WP_003405970.1	MMPL family transporter	91.1	52.5	79.8
MGA_4936	LOCUS_49300	sequence1:5025335..5026153(+)	frameshift		5026097,5025955	WP_003405957.1	enoyl-CoA hydratase	51.5	51.5	57.1
MGA_4937	LOCUS_49310	sequence1:5026141..5026350(+)	frameshift		5026097,5025955	WP_003896587.1	enoyl-CoA hydratase	98.6	24.7	64.7
MGA_4958	LOCUS_49520	sequence1:5045662..5046249(+)	internal_stop_codon	5045666..5045668(+)		WP_011730663.1	SDR family NAD(P)-dependent oxidoreductase	77.9	51.3	35.2
MGA_4959	LOCUS_49530	sequence1:5046393..5047655(+)	partial			WP_013229637.1	TetR/AcrR family transcriptional regulator	65.2	64.0	28.0
MGA_4965	LOCUS_49590	sequence1:5054847..5055032(+)	partial			WP_003401503.1	type VII secretion system protein EsxG	65.6	41.2	85.0
MGA_4969	LOCUS_49630	sequence1:5059876..5060385(-)	frameshift		5060411,5060451	WP_011731425.1	methylisocitrate lyase	98.8	54.8	77.2
MGA_4970	LOCUS_49640	sequence1:5060413..5060793(-)	frameshift		5060411,5060451	WP_011731425.1	methylisocitrate lyase	91.3	37.7	77.4
MGA_4972	LOCUS_49660	sequence1:5062409..5063044(+)	frameshift		5063023	WP_011731423.1	short-chain fatty acyl-CoA regulator family protein	96.2	43.0	73.4
MGA_4973	LOCUS_49670	sequence1:5063055..5063846(+)	frameshift		5063023	WP_011731423.1	short-chain fatty acyl-CoA regulator family protein	98.9	55.1	77.3
MGA_4976	LOCUS_49700	sequence1:5065478..5066407(-)	frameshift		5065564	WP_003900505.1	PPE family protein	93.5	76.0	56.2
MGA_4980	LOCUS_49740	sequence1:5069518..5070171(+)	partial			WP_010908039.1	TetR/AcrR family transcriptional regulator	30.9	48.9	67.2
MGA_4990	LOCUS_49840	sequence1:5077113..5077802(+)	frameshift,internal_stop_codon	5077101..5077103(+)	5077081	WP_003898734.1	hypothetical protein	99.1	79.7	82.5
MGA_4992	LOCUS_49860	sequence1:5078538..5079149(-)	internal_stop_codon	5079171..5079173(-),5079177..5079179(-)		WP_003898733.1	hypothetical protein	60.6	53.0	80.5
MGA_4996	LOCUS_49900	sequence1:5081053..5081448(+)	partial			WP_003406566.1	DUF732 domain-containing protein	68.7	77.0	38.9
MGA_5014	LOCUS_50080	sequence1:5090151..5090789(-)	partial			WP_010867504.1	tyrosine recombinase XerA	85.8	66.1	32.3
MGA_5045	LOCUS_50390	sequence1:5120742..5125580(-)	partial			WP_003906336.1	PPE family protein	47.6	35.6	37.0
MGA_5046	LOCUS_50400	sequence1:5125644..5128583(-)	partial			WP_211695346.1	PPE family protein	79.2	24.4	35.8
MGA_5049	LOCUS_50430	sequence1:5129338..5130000(-)	frameshift		5129432,5129463	WP_003900088.1	PPE family protein	81.4	30.9	46.4
MGA_5050	LOCUS_50440	sequence1:5130064..5134923(-)	partial			WP_211695346.1	PPE family protein	46.9	24.0	36.9
MGA_5052	LOCUS_50460	sequence1:5139551..5140732(-)	frameshift		5139586,5139559	WP_099318959.1	PE family protein	29.8	25.5	53.8
MGA_5056	LOCUS_50500	sequence1:5143392..5144627(-)	frameshift		5144769	WP_003405750.1	DUF255 domain-containing protein	100.0	62.0	73.4
MGA_5057	LOCUS_50510	sequence1:5144530..5145393(-)	frameshift		5144778	WP_003405750.1	DUF255 domain-containing protein	68.6	29.4	84.8
MGA_5060	LOCUS_50540	sequence1:5146741..5147100(+)	partial			WP_010908868.1	DUF4307 domain-containing protein	87.4	72.2	75.0
MGA_5063	LOCUS_50570	sequence1:5149109..5149783(-)	frameshift		5149693,5149638	WP_003405732.1	RDD family protein	97.8	79.2	50.7
MGA_5068	LOCUS_50620	sequence1:5154993..5155619(-)	frameshift		5155713	WP_003405719.1	Bax inhibitor-1/YccA family protein	100.0	74.8	86.1
MGA_5085	LOCUS_50790	sequence1:5170884..5172473(-)	partial			WP_011388984.1	esterase-like activity of phytase family protein	65.2	79.9	27.3
MGA_5095	LOCUS_50890	sequence1:5180288..5182543(-)	partial			WP_048066275.1	PKD domain-containing protein	40.7	17.1	33.4
MGA_5099	LOCUS_50930	sequence1:5185011..5185406(+)	internal_stop_codon	5185404..5185406(+)		WP_003416786.1	IS30 family transposase	87.8	33.1	49.6
MGA_5100	LOCUS_50940	sequence1:5185509..5185817(+)	internal_stop_codon	5185404..5185406(+)		WP_158226985.1	IS30 family transposase	92.2	30.9	57.4
MGA_5101	LOCUS_50950	sequence1:5186068..5187534(+)	partial			WP_003899118.1	PecA family PE domain-processing aspartic protease	25.0	21.9	50.0
MGA_5105	LOCUS_50990	sequence1:5190734..5191399(+)	frameshift,internal_stop_codon	5191397..5191399(+)	5190723	WP_003405368.1	PPE family protein	100.0	55.8	38.8
MGA_5106	LOCUS_51000	sequence1:5191415..5191600(+)	internal_stop_codon	5191397..5191399(+)		WP_003405368.1	PPE family protein	98.4	15.1	55.7
MGA_5119	LOCUS_51130	sequence1:5205675..5206268(+)	frameshift		5205601	WP_003892510.1	ABC transporter permease	100.0	69.5	63.6
MGA_5121	LOCUS_51150	sequence1:5207824..5208984(+)	partial			WP_005112460.1	MlaD family protein	69.4	76.9	50.9
MGA_5125	LOCUS_51190	sequence1:5212176..5213591(+)	partial			WP_005079755.1	MlaD family protein	66.9	70.4	48.0
MGA_5126	LOCUS_51200	sequence1:5213798..5214250(+)	partial			WP_011727450.1	hypothetical protein	98.0	64.5	57.1
MGA_5128	LOCUS_51220	sequence1:5214984..5215481(+)	partial			WP_005092780.1	mannan-binding family protein	85.5	56.2	39.7
MGA_5131	LOCUS_51250	sequence1:5218187..5218522(+)	partial			WP_029104495.1	RsiV family protein	100.0	40.5	41.4
MGA_5135	LOCUS_51290	sequence1:5220496..5221197(-)	partial			WP_003405293.1	septum formation initiator family protein	73.0	75.0	70.2
MGA_5137	LOCUS_51310	sequence1:5222542..5223153(-)	frameshift		5223160	WP_003900256.1	lytic transglycosylase domain-containing protein	100.0	82.3	78.8
MGA_5140	LOCUS_51340	sequence1:5228381..5228701(+)	frameshift		5228768,5228620	WP_005109975.1	diaminopimelate decarboxylase	77.4	18.3	58.5
MGA_5141	LOCUS_51350	sequence1:5228797..5229693(+)	frameshift		5228626,5228774	WP_005109975.1	diaminopimelate decarboxylase	97.3	68.3	57.9
MGA_5148	LOCUS_51420	sequence1:5237604..5237858(-)	frameshift		5237666	WP_010950392.1	LuxR family transcriptional regulator	50.0	3.9	69.0
MGA_5149	LOCUS_51430	sequence1:5238333..5239223(+)	frameshift		5238337	WP_029104541.1	cytochrome P450	95.3	70.4	57.6
MGA_5163	LOCUS_51570	sequence1:5252358..5252519(+)	frameshift		5252269	WP_003408976.1	type VII secretion system ESX-5 target PE18	69.8	37.4	73.0
MGA_5168	LOCUS_51620	sequence1:5256064..5256915(+)	partial			WP_012257358.1	WecB/TagA/CpsF family glycosyltransferase	58.7	32.9	39.8
MGA_5171	LOCUS_51650	sequence1:5259939..5261963(+)	partial			WP_003893217.1	glycosyltransferase family 2 protein	33.2	76.4	30.2
MGA_5176	LOCUS_51700	sequence1:5266278..5266829(-)	frameshift,internal_stop_codon	5266278..5266280(-)	5266187	WP_003903691.1	HNH endonuclease signature motif containing protein	100.0	40.5	56.0
MGA_5177	LOCUS_51710	sequence1:5267051..5269003(-)	partial			WP_017276633.1	FkbM family methyltransferase	31.7	83.5	30.7
MGA_5179	LOCUS_51730	sequence1:5270478..5272028(-)	partial			WP_010889293.1	tyrosine-protein kinase domain-containing protein	50.4	49.3	27.8
MGA_5182	LOCUS_51760	sequence1:5276104..5276895(+)	partial			WP_017276633.1	FkbM family methyltransferase	66.9	73.4	34.3
MGA_5191	LOCUS_51850	sequence1:5286556..5287218(-)	frameshift		5287252	WP_003405165.1	DUF5642 family protein	95.0	82.9	75.1
MGA_5197	LOCUS_51910	sequence1:5290749..5291723(-)	partial			WP_037393339.1	AraC family transcriptional regulator	39.2	39.8	41.5
MGA_5200	LOCUS_51940	sequence1:5293671..5294174(+)	partial			WP_005479204.1	His-Xaa-Ser system radical SAM maturase HxsB	89.2	31.8	36.2
MGA_5201	LOCUS_51950	sequence1:5294171..5294617(+)	frameshift		5294569	WP_005457560.1	His-Xaa-Ser system radical SAM maturase HxsC	31.1	12.1	56.5
MGA_5202	LOCUS_51960	sequence1:5294706..5295248(+)	frameshift,internal_stop_codon	5295246..5295248(+)	5294569	WP_005457560.1	His-Xaa-Ser system radical SAM maturase HxsC	98.9	48.1	37.4
MGA_5209	LOCUS_52030	sequence1:5301240..5302088(+)	frameshift		5301201,5301217	WP_164929392.1	IS3-like element ISGvi5 family transposase	94.3	66.8	44.6
MGA_5214	LOCUS_52080	sequence1:5305963..5306394(-)	frameshift		5306449,5306489	WP_003898680.1	molybdopterin molybdotransferase MoeA	100.0	33.6	95.8
MGA_5215	LOCUS_52090	sequence1:5306292..5307257(-)	frameshift		5306492,5306455	WP_003405146.1	molybdopterin molybdotransferase MoeA	79.8	59.2	82.8
MGA_5218	LOCUS_52120	sequence1:5308959..5309303(+)	partial			WP_010907580.1	zinc ribbon domain-containing protein	73.7	83.8	67.9
MGA_5220	LOCUS_52140	sequence1:5310100..5310984(+)	partial			WP_174519569.1	polyprenyl synthetase family protein	87.8	74.6	40.5
MGA_5228	LOCUS_52220	sequence1:5317291..5318136(+)	frameshift		5317274	WP_003404960.1	DUF1446 domain-containing protein	100.0	50.2	82.6
MGA_5235	LOCUS_52290	sequence1:5325653..5325958(+)	partial			WP_003404920.1	hypothetical protein	90.1	65.5	57.1
MGA_5236	LOCUS_52300	sequence1:5325955..5326542(+)	partial			WP_003414155.1	alpha/beta hydrolase family protein	85.1	29.4	33.1
MGA_5240	LOCUS_52340	sequence1:5331079..5331654(-)	partial			WP_005086809.1	hypothetical protein	67.5	72.1	37.0
MGA_5248	LOCUS_52420	sequence1:5340719..5341567(+)	frameshift		5341801,5341794,5341369,5341388,5341390	WP_003911027.1	PE family protein	42.9	27.8	60.7
MGA_5251	LOCUS_52450	sequence1:5342388..5343623(+)	frameshift		5343506,5343509,5343503	WP_010886108.1	PE family protein	32.6	15.7	56.7
MGA_5257	LOCUS_52510	sequence1:5347538..5347837(+)	frameshift		5347468,5347405,5347486	WP_011730597.1	hypothetical protein	98.0	42.7	52.6
MGA_5260	LOCUS_52540	sequence1:5352737..5353006(+)	partial			WP_010907562.1	chorismate mutase	86.5	74.3	79.5
MGA_5264	LOCUS_52580	sequence1:5357219..5358730(-)	partial			WP_003911027.1	PE family protein	23.9	26.4	69.2
MGA_5266	LOCUS_52600	sequence1:5359275..5360555(-)	frameshift		5359376,5359260,5359285,5359324,5359741,5359262	WP_003911027.1	PE family protein	28.2	26.4	46.7
MGA_5268	LOCUS_52620	sequence1:5361597..5362502(+)	partial			WP_011730613.1	diiron oxygenase	100.0	73.1	73.8
MGA_5280	LOCUS_52740	sequence1:5376942..5379182(+)	partial			WP_003404782.1	serine/threonine protein kinase PknD	40.2	45.2	80.7
MGA_5287	LOCUS_52810	sequence1:5385859..5386119(-)	partial			WP_013229630.1	DUF3761 domain-containing protein	73.3	40.4	47.8
MGA_5288	LOCUS_52820	sequence1:5386451..5386867(+)	partial			WP_011730642.1	poly-gamma-glutamate hydrolase family protein	91.3	35.5	73.8
MGA_5290	LOCUS_52840	sequence1:5388542..5388883(-)	frameshift		5389025	WP_042464373.1	carotenoid oxygenase family protein	93.8	21.4	41.7
MGA_5291	LOCUS_52850	sequence1:5388915..5390063(-)	frameshift		5389037	WP_011727738.1	carotenoid oxygenase family protein	73.3	58.5	47.6
MGA_5292	LOCUS_52860	sequence1:5390154..5390717(+)	partial			WP_011730460.1	TetR/AcrR family transcriptional regulator	40.1	31.6	37.3
MGA_5293	LOCUS_52870	sequence1:5391173..5392045(+)	partial			WP_003911027.1	PE family protein	32.8	21.6	58.9
MGA_5295	LOCUS_52890	sequence1:5392496..5392888(-)	partial			WP_010880156.1	TetR/AcrR family transcriptional regulator	73.8	50.5	29.0
MGA_5306	LOCUS_53000	sequence1:5404843..5405709(+)	frameshift		5404880	WP_013229361.1	helix-turn-helix domain-containing protein	93.8	59.0	32.3
MGA_5308	LOCUS_53020	sequence1:5406684..5407802(+)	frameshift		5407842,5407595	WP_003404744.1	acetyl-CoA acetyltransferase	81.7	75.2	81.0
MGA_5311	LOCUS_53050	sequence1:5409904..5410143(-)	partial			WP_010908717.1	hypothetical protein	94.9	52.1	49.3
MGA_5320	LOCUS_53140	sequence1:5420393..5421583(+)	internal_stop_codon	5421581..5421583(+)		WP_003404691.1	carboxyl transferase domain-containing protein	100.0	80.4	78.1
MGA_5321	LOCUS_53150	sequence1:5421620..5421877(+)	internal_stop_codon	5421581..5421583(+)		WP_003404691.1	carboxyl transferase domain-containing protein	98.8	17.0	70.2
MGA_5329	LOCUS_53230	sequence1:5430037..5430552(-)	partial			WP_010886177.1	PE family protein	61.4	18.0	45.7
MGA_5333	LOCUS_53270	sequence1:5433931..5439075(+)	partial			WP_011031572.1	helix-turn-helix transcriptional regulator	27.2	47.0	32.6
MGA_5343	LOCUS_53370	sequence1:5449136..5449423(-)	frameshift		5449485,5449430	WP_003404606.1	MarR family transcriptional regulator	100.0	66.4	87.4
MGA_5354	LOCUS_53480	sequence1:5457543..5458382(+)	partial			WP_003900223.1	resuscitation-promoting factor protein RpfA	59.5	40.8	60.6
MGA_5365	LOCUS_53590	sequence1:5467747..5467899(-)	internal_stop_codon	5467921..5467923(-)		WP_029104389.1	TetR/AcrR family transcriptional regulator	96.0	26.5	60.4
MGA_5374	LOCUS_53680	sequence1:5475772..5475900(-)	internal_stop_codon	5475961..5475963(-)		WP_003404412.1	SRPBCC family protein	92.9	26.5	76.9
MGA_5375	LOCUS_53690	sequence1:5475961..5476410(-)	internal_stop_codon	5475961..5475963(-)		WP_003404412.1	SRPBCC family protein	56.4	57.1	82.1
MGA_5376	LOCUS_53700	sequence1:5476297..5476536(+)	frameshift		5476822,5476527	WP_003900222.1	alpha-keto-acid decarboxylase	96.2	13.6	89.5
MGA_5377	LOCUS_53710	sequence1:5476848..5477966(+)	frameshift		5476825	WP_003900222.1	alpha-keto-acid decarboxylase	98.9	65.7	86.4
MGA_5379	LOCUS_53730	sequence1:5478802..5479410(-)	partial			WP_003407152.1	membrane protein	68.8	63.2	61.2
MGA_5380	LOCUS_53740	sequence1:5479407..5480471(-)	partial			WP_003407157.1	membrane protein	50.8	68.2	46.7
MGA_5386	LOCUS_53800	sequence1:5485140..5485667(-)	frameshift		5485692	WP_003896181.1	TetR/AcrR family transcriptional regulator	79.4	70.1	61.7
MGA_5390	LOCUS_53840	sequence1:5488305..5489135(-)	partial			WP_003897943.1	hypothetical protein	71.4	79.1	34.5
MGA_5393	LOCUS_53870	sequence1:5490653..5490934(+)	partial			WP_003417257.1	pilin structural subunit Mtp	78.5	68.9	53.4
MGA_5395	LOCUS_53890	sequence1:5491633..5492370(+)	partial			WP_003407157.1	membrane protein	74.3	69.0	41.8
MGA_5396	LOCUS_53900	sequence1:5492484..5492933(+)	partial			WP_003407152.1	membrane protein	100.0	68.2	48.7
MGA_5410	LOCUS_54040	sequence1:5507384..5508508(+)	frameshift		5507399	WP_011730096.1	cytochrome P450	99.2	81.9	75.2
MGA_5418	LOCUS_54120	sequence1:5514907..5515863(-)	frameshift		5515951	WP_011730110.1	cytochrome P450	100.0	79.5	63.5
MGA_5420	LOCUS_54140	sequence1:5517253..5518371(-)	partial			WP_010919114.1	hypothetical protein	53.5	57.1	32.7
MGA_5421	LOCUS_54150	sequence1:5518428..5519048(+)	partial			WP_013223605.1	TetR/AcrR family transcriptional regulator	44.7	46.2	38.0
MGA_5423	LOCUS_54170	sequence1:5520289..5521035(-)	partial			WP_003112901.1	alpha/beta hydrolase	51.2	44.6	37.0
MGA_5424	LOCUS_54180	sequence1:5521219..5521626(+)	partial			WP_003409199.1	DUF4189 domain-containing protein	68.9	64.3	60.2
MGA_5428	LOCUS_54220	sequence1:5523800..5524759(+)	frameshift		5524633	WP_014878152.1	amidohydrolase family protein	84.3	72.0	80.0
MGA_5429	LOCUS_54230	sequence1:5524669..5524908(+)	frameshift		5524633	WP_014878152.1	amidohydrolase family protein	88.6	18.5	68.6
MGA_5440	LOCUS_54340	sequence1:5533374..5534684(+)	frameshift,internal_stop_codon	5534901..5534903(+)	5534852,5534915,5534444	WP_189327688.1	IS21 family transposase	81.7	64.0	53.5
MGA_5442	LOCUS_54360	sequence1:5535033..5535536(+)	frameshift		5535440,5535667,5535615	WP_010974232.1	IS21-like element helper ATPase IstB	71.9	47.6	32.5
MGA_5446	LOCUS_54400	sequence1:5537802..5538113(+)	frameshift		5538008,5538294	WP_011730107.1	alpha/beta hydrolase	68.0	23.5	64.3
MGA_5447	LOCUS_54410	sequence1:5538356..5538649(+)	frameshift		5538300	WP_011730107.1	alpha/beta hydrolase	83.5	27.2	42.0
MGA_5449	LOCUS_54430	sequence1:5540001..5540168(+)	partial			WP_011730111.1	ferredoxin	80.0	66.7	59.1
MGA_5460	LOCUS_54540	sequence1:5549741..5550556(+)	frameshift		5549733	WP_011730128.1	amidohydrolase family protein	99.3	66.3	84.4
MGA_5491	LOCUS_54840	sequence1:5582461..5583276(+)	frameshift		5583102	WP_003906521.1	HNH endonuclease signature motif containing protein	78.6	47.5	53.7
MGA_5492	LOCUS_54850	sequence1:5583276..5583824(+)	frameshift		5583105	WP_003899094.1	HNH endonuclease signature motif containing protein	98.9	39.4	65.0
MGA_5496	LOCUS_54890	sequence1:5586571..5587239(-)	frameshift		5587282,5586756	WP_011730143.1	LLM class flavin-dependent oxidoreductase	73.0	37.2	84.6
MGA_5497	LOCUS_54900	sequence1:5587169..5587798(-)	frameshift		5587285	WP_011730143.1	LLM class flavin-dependent oxidoreductase	90.9	45.0	78.6
MGA_5498	LOCUS_54910	sequence1:5587841..5588776(-)	frameshift		5588784	WP_011730144.1	FAD-binding protein	97.4	51.6	80.5
MGA_5499	LOCUS_54920	sequence1:5588779..5589015(-)	frameshift		5589064,5588784	WP_011730144.1	FAD-binding protein	98.7	13.1	71.4
MGA_5500	LOCUS_54930	sequence1:5589577..5589738(-)	frameshift		5589838	WP_124712479.1	3-carboxyethylcatechol 2,3-dioxygenase	90.6	15.3	77.1
MGA_5501	LOCUS_54940	sequence1:5589819..5590496(-)	frameshift		5590019,5589838	WP_124712479.1	3-carboxyethylcatechol 2,3-dioxygenase	71.6	51.3	68.9
MGA_5504	LOCUS_54970	sequence1:5593307..5593801(+)	frameshift		5593180,5593333	WP_011730148.1	helix-turn-helix domain-containing protein	98.8	68.5	77.6
MGA_5512	LOCUS_55050	sequence1:5605506..5606540(+)	frameshift		5605505,5605268	WP_003906680.1	PPE family protein	79.9	67.0	36.2
MGA_5531	LOCUS_55240	sequence1:5622541..5622831(-)	frameshift		5622624,5622865	WP_003404370.1	M15 family metallopeptidase	72.9	27.1	70.0
MGA_5532	LOCUS_55250	sequence1:5623558..5624964(+)	partial			WP_013229184.1	SpoIIE family protein phosphatase	52.8	64.0	48.2
MGA_5553	LOCUS_55460	sequence1:5642531..5643232(-)	frameshift		5643424,5643295	WP_172591975.1	phosphate ABC transporter substrate-binding protein PstS	100.0	64.2	65.7
MGA_5561	LOCUS_55540	sequence1:5651305..5652849(+)	partial			WP_010886110.1	serine/threonine protein kinase PknH	36.4	29.4	36.9
MGA_5573	LOCUS_55660	sequence1:5665839..5667011(+)	partial			WP_003112465.1	diguanylate cyclase	75.4	26.8	28.7
MGA_5575	LOCUS_55680	sequence1:5668514..5670106(-)	partial			WP_003404103.1	M18 family aminopeptidase	66.0	83.8	76.9
MGA_5579	LOCUS_55720	sequence1:5673626..5674096(+)	frameshift		5673618	WP_003403998.1	hypothetical protein	100.0	78.9	53.8
MGA_5585	LOCUS_55780	sequence1:5678540..5679292(-)	partial			WP_020640552.1	LLM class F420-dependent oxidoreductase	50.4	38.8	31.0
MGA_5586	LOCUS_55790	sequence1:5679342..5680070(-)	internal_stop_codon	5680107..5680109(-)		WP_010886087.1	hypothetical protein	99.6	75.5	71.4
MGA_5588	LOCUS_55810	sequence1:5680866..5681069(-)	frameshift		5681074	WP_003911278.1	FAD-binding dehydrogenase	80.6	9.5	79.6
MGA_5597	LOCUS_55900	sequence1:5689804..5692074(-)	partial			WP_010950585.1	serine/threonine protein kinase PknE	36.2	48.2	62.2
MGA_5604	LOCUS_55970	sequence1:5699185..5700732(+)	partial			WP_003899000.1	serine/threonine protein kinase PknF	52.8	56.9	64.0
MGA_5607	LOCUS_56000	sequence1:5702924..5703247(+)	frameshift		5702937	WP_011728943.1	M20/M25/M40 family metallo-hydrolase	83.2	24.7	73.0
MGA_5609	LOCUS_56020	sequence1:5703641..5703919(-)	frameshift		5703977	WP_010950441.1	NAD(P)-dependent oxidoreductase	91.3	28.5	44.0
MGA_5610	LOCUS_56030	sequence1:5703861..5704529(-)	frameshift		5703977	WP_011730850.1	NAD(P)-dependent oxidoreductase	79.3	62.0	66.5
MGA_5612	LOCUS_56050	sequence1:5705311..5706201(-)	frameshift		5706214	WP_003403919.1	aldehyde dehydrogenase	99.7	60.3	81.0
MGA_5621	LOCUS_56140	sequence1:5714545..5715060(+)	frameshift		5715022,5714919	WP_003897267.1	NDMA-dependent alcohol dehydrogenase	73.1	33.3	86.4
MGA_5622	LOCUS_56150	sequence1:5715045..5715674(+)	frameshift		5715025,5714919	WP_003403885.1	NDMA-dependent alcohol dehydrogenase	100.0	55.7	80.4
MGA_5626	LOCUS_56190	sequence1:5717635..5718552(-)	partial			WP_001221442.1	C1 family peptidase	82.0	29.3	26.6
MGA_5631	LOCUS_56240	sequence1:5722340..5722828(+)	internal_stop_codon	5722313..5722315(+)		WP_003895122.1	sterol desaturase family protein	83.3	44.0	60.0
MGA_5632	LOCUS_56250	sequence1:5722972..5724990(+)	partial			WP_011727491.1	bifunctional serine/threonine-protein kinase/transporter substrate-binding domain-containing protein	40.2	44.6	62.5
MGA_5638	LOCUS_56310	sequence1:5729566..5730756(-)	frameshift		5730784	WP_135359439.1	MFS transporter	95.2	69.4	49.1
MGA_5640	LOCUS_56330	sequence1:5731558..5733825(-)	partial			WP_011727491.1	bifunctional serine/threonine-protein kinase/transporter substrate-binding domain-containing protein	35.6	44.4	61.3
MGA_5652	LOCUS_56450	sequence1:5743550..5744101(+)	frameshift		5744069,5744005	WP_003418954.1	hypothetical protein	71.6	68.2	73.3
MGA_5655	LOCUS_56480	sequence1:5745429..5747111(-)	partial			WP_003418963.1	virulence factor Mce family protein	75.0	74.5	84.3
MGA_5659	LOCUS_56520	sequence1:5750800..5751531(-)	frameshift		5751523	WP_003418972.1	virulence factor Mce family protein	98.4	68.3	81.6
MGA_5667	LOCUS_56600	sequence1:5758610..5759629(+)	frameshift		5759368,5759498	WP_003901655.1	long-chain-fatty-acid--CoA ligase FadD17	74.6	50.4	75.5
MGA_5668	LOCUS_56610	sequence1:5759566..5760114(+)	frameshift		5759504,5759371	WP_003901655.1	long-chain-fatty-acid--CoA ligase FadD17	98.9	35.9	81.7
MGA_5670	LOCUS_56630	sequence1:5760755..5765377(+)	frameshift		5764882,5764867,5765524,5764870,5764891,5764879	WP_010886173.1	PE family protein	7.5	16.2	69.0
MGA_5675	LOCUS_56680	sequence1:5769056..5770264(+)	partial			WP_003400998.1	PE-PPE domain-containing protein	26.1	17.9	41.0
MGA_5709	LOCUS_57020	sequence1:5803001..5803279(+)	frameshift		5803258	WP_014877737.1	cyclopropane mycolic acid synthase family methyltransferase	93.5	29.3	80.2
MGA_5710	LOCUS_57030	sequence1:5803287..5803886(+)	frameshift		5803258	WP_014877737.1	cyclopropane mycolic acid synthase family methyltransferase	99.5	67.3	73.7
MGA_5713	LOCUS_57060	sequence1:5805253..5805684(+)	frameshift		5805916,5805606	WP_003407779.1	MMPL family transporter	76.9	11.4	63.6
MGA_5714	LOCUS_57070	sequence1:5805927..5808188(+)	frameshift		5805919	WP_003407779.1	MMPL family transporter	97.6	76.1	70.4
MGA_5716	LOCUS_57090	sequence1:5808730..5809062(+)	frameshift		5809050	WP_049745538.1	TetR/AcrR family transcriptional regulator	98.2	40.4	63.9
MGA_5717	LOCUS_57100	sequence1:5809070..5809528(+)	frameshift		5809056	WP_049745538.1	TetR/AcrR family transcriptional regulator	99.3	56.6	49.7
MGA_5718	LOCUS_57110	sequence1:5810010..5811017(+)	frameshift		5809870	WP_011727494.1	KasA/KasB family beta-ketoacyl-ACP synthase	95.8	77.2	69.8
MGA_5723	LOCUS_57160	sequence1:5814809..5815804(-)	partial			WP_003419299.1	acyl-CoA dehydrogenase FadE28	73.7	72.0	80.7
MGA_5724	LOCUS_57170	sequence1:5815804..5816553(-)	frameshift		5816696	WP_011730960.1	cytochrome P450	99.6	58.5	86.0
MGA_5725	LOCUS_57180	sequence1:5816505..5817053(-)	frameshift		5816696	WP_011730960.1	cytochrome P450	66.5	28.6	77.0
MGA_5728	LOCUS_57210	sequence1:5818874..5819308(+)	frameshift		5819287	WP_003901321.1	class I SAM-dependent methyltransferase	92.4	32.7	67.7
MGA_5729	LOCUS_57220	sequence1:5819292..5820104(+)	frameshift		5819287	WP_003901321.1	class I SAM-dependent methyltransferase	98.5	64.9	54.3
MGA_5749	LOCUS_57420	sequence1:5839046..5839762(+)	frameshift		5839711	WP_003419356.1	pyridoxal phosphate-dependent aminotransferase	94.1	57.7	87.1
MGA_5750	LOCUS_57430	sequence1:5839729..5840214(+)	frameshift		5839711	WP_003419356.1	pyridoxal phosphate-dependent aminotransferase	100.0	41.5	83.9
MGA_5752	LOCUS_57450	sequence1:5841132..5841554(+)	partial			WP_003894735.1	hypothetical protein	74.3	75.2	36.5
MGA_5754	LOCUS_57470	sequence1:5842151..5842975(-)	partial			WP_003978319.1	CYTH and CHAD domain-containing protein	94.9	52.7	41.0
MGA_5759	LOCUS_57520	sequence1:5846767..5846952(+)	frameshift		5846937	WP_003900102.1	3-ketosteroid-9-alpha-hydroxylase reductase subunit	95.1	15.1	75.9
MGA_5760	LOCUS_57530	sequence1:5846961..5847863(+)	frameshift		5846937	WP_003900102.1	3-ketosteroid-9-alpha-hydroxylase reductase subunit	100.0	83.0	82.3
MGA_5762	LOCUS_57550	sequence1:5848463..5849194(-)	partial			WP_011727994.1	LuxR family transcriptional regulator	74.5	20.8	34.6
MGA_5764	LOCUS_57570	sequence1:5849632..5851248(-)	partial			WP_011030729.1	LuxR family transcriptional regulator	78.1	45.8	32.5
MGA_5768	LOCUS_57610	sequence1:5853075..5853407(-)	partial			WP_003420544.1	lipoprotein LpqH	99.1	66.0	43.1
MGA_5785	LOCUS_57780	sequence1:5869678..5870019(-)	frameshift		5870050	WP_003419436.1	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	97.3	47.6	79.1
MGA_5803	LOCUS_57960	sequence1:5885809..5886420(-)	frameshift		5886553	WP_003419517.1	type III pantothenate kinase	100.0	74.6	88.7
MGA_5807	LOCUS_58000	sequence1:5888985..5889530(-)	frameshift		5889456,5889314,5889716,5889341,5889484,5889565,5889726	WP_003899595.1	hypothetical protein	85.1	29.2	32.6
MGA_5819	LOCUS_58120	sequence1:5899774..5899986(+)	partial			WP_005064744.1	hypothetical protein	65.7	69.7	52.2
MGA_5820	LOCUS_58130	sequence1:5900045..5901097(-)	frameshift		5901119	WP_003900723.1	PPE family protein	100.0	84.3	48.2
MGA_5830	LOCUS_58230	sequence1:5909762..5910190(+)	partial			WP_003419590.1	DUF2304 domain-containing protein	63.4	78.9	80.0
MGA_5840	LOCUS_58330	sequence1:5916884..5917876(+)	frameshift		5917834	WP_189327688.1	IS21 family transposase	96.4	57.1	53.6
MGA_5841	LOCUS_58340	sequence1:5917843..5918547(+)	frameshift,internal_stop_codon	5918411..5918413(+)	5917840,5918425,5918362	WP_189327688.1	IS21 family transposase	97.4	40.7	44.0
MGA_5852	LOCUS_58450	sequence1:5925540..5925872(-)	frameshift		5925883	WP_003419637.1	DNA polymerase III subunit delta'	100.0	27.4	83.6
MGA_5853	LOCUS_58460	sequence1:5925779..5926720(-)	frameshift		5925892	WP_003419637.1	DNA polymerase III subunit delta'	85.6	66.8	74.6
MGA_5859	LOCUS_58520	sequence1:5935241..5935591(+)	frameshift		5935564,5935741	WP_010886133.1	PE family protein	93.1	21.7	63.0
MGA_5860	LOCUS_58530	sequence1:5936246..5936995(+)	frameshift		5936899,5936900,5936902,5936914,5937049,5936985,5937051,5937052,5937053,5936992,5936354,5936998,5937001,5937005,5937202,5937203,5937204,5937206,5936377,5936444,5936893,5936894	WP_014000452.1	PE family protein PE_PGRS12, long form	22.5	6.0	69.6
MGA_5862	LOCUS_58550	sequence1:5937946..5938686(+)	partial			WP_010886177.1	PE family protein	56.1	23.5	40.6
MGA_5864	LOCUS_58570	sequence1:5940782..5941069(-)	frameshift		5940787	WP_010886180.1	apoptosis inhibitor	98.9	75.2	70.2
MGA_5867	LOCUS_58600	sequence1:5941934..5942248(-)	frameshift		5942319	WP_003419679.1	type II secretion system F family protein	96.2	37.6	64.0
MGA_5868	LOCUS_58610	sequence1:5942200..5942724(-)	frameshift		5942319	WP_003419679.1	type II secretion system F family protein	29.3	19.2	70.6
MGA_5899	LOCUS_58920	sequence1:5971851..5972003(-)	frameshift		5972070	WP_010950925.1	cytochrome P450	92.0	9.7	84.8
MGA_5900	LOCUS_58930	sequence1:5971996..5973192(-)	frameshift		5972070	WP_010950925.1	cytochrome P450	91.7	76.5	78.4
MGA_5908	LOCUS_59010	sequence1:5976672..5976992(-)	frameshift		5976709,5976758	WP_162275383.1	PIG-L family deacetylase	63.2	29.2	41.9
MGA_5914	LOCUS_59070	sequence1:5980938..5981903(+)	partial			WP_037392461.1	AraC family transcriptional regulator	45.8	45.1	34.0
MGA_5915	LOCUS_59080	sequence1:5981904..5982437(-)	frameshift		5981921	WP_011727026.1	PAS and ANTAR domain-containing protein	97.2	73.5	45.3
MGA_5921	LOCUS_59140	sequence1:5985804..5986436(+)	partial			WP_012257191.1	STAS domain-containing protein	87.1	64.7	38.1
MGA_5925	LOCUS_59180	sequence1:5987902..5990136(+)	partial			WP_013227688.1	SpoIIE family protein phosphatase	91.8	50.6	39.5
MGA_5927	LOCUS_59200	sequence1:5991151..5991357(-)	partial			WP_011727890.1	CDGSH iron-sulfur domain-containing protein	76.5	73.2	73.1
MGA_5931	LOCUS_59240	sequence1:5993900..5994832(-)	partial			WP_197530111.1	SRPBCC family protein	54.8	66.8	49.4
MGA_5942	LOCUS_59350	sequence1:6005294..6005677(-)	partial			WP_011727909.1	hypothetical protein	58.3	64.7	48.0
MGA_5943	LOCUS_59360	sequence1:6005982..6006692(+)	partial			WP_050039320.1	PadR family transcriptional regulator	61.4	77.1	78.6
MGA_5954	LOCUS_59470	sequence1:6021175..6021579(-)	partial			WP_003419814.1	hypothetical protein	31.3	32.6	61.9
MGA_5955	LOCUS_59480	sequence1:6021683..6022078(-)	partial			WP_003419816.1	hypothetical protein	32.8	35.8	65.1
MGA_5961	LOCUS_59540	sequence1:6029670..6030002(+)	frameshift,internal_stop_codon	6030001..6030003(+)	6029601,6030099,6030169,6030190,6030175	WP_034283890.1	LLM class flavin-dependent oxidoreductase	97.3	23.1	55.1
MGA_5962	LOCUS_59550	sequence1:6030199..6030879(+)	frameshift,internal_stop_codon	6030000..6030002(+)	6030193,6030171,6030077	WP_013528238.1	LLM class flavin-dependent oxidoreductase	97.3	52.4	32.6
MGA_5967	LOCUS_59600	sequence1:6033575..6034108(-)	frameshift,internal_stop_codon	6033575..6033577(-)	6034106	WP_187436542.1	IS256 family transposase	76.3	31.9	33.1
MGA_5973	LOCUS_59660	sequence1:6038111..6039298(+)	frameshift		6039178,6039311	WP_012258027.1	ATP-binding protein	89.6	54.4	35.7
MGA_5974	LOCUS_59670	sequence1:6039295..6040071(+)	frameshift		6039178,6039311	WP_012258027.1	ATP-binding protein	95.7	37.9	59.5
MGA_5981	LOCUS_59740	sequence1:6044070..6046463(+)	partial			WP_012258037.1	putative baseplate assembly protein	40.2	38.5	37.4
MGA_5984	LOCUS_59770	sequence1:6051872..6053587(+)	partial			WP_012258040.1	DUF6519 domain-containing protein	73.7	39.4	36.3
MGA_5986	LOCUS_59790	sequence1:6054282..6054776(+)	partial			WP_116848736.1	DUF4157 domain-containing protein	41.5	10.4	52.9
MGA_5999	LOCUS_59920	sequence1:6066779..6067210(-)	frameshift		6067221,6067342	WP_003420417.1	DNA polymerase III subunits gamma/tau	99.3	25.6	66.4
MGA_6000	LOCUS_59930	sequence1:6067147..6068625(-)	frameshift		6067221,6067342	WP_003420417.1	DNA polymerase III subunits gamma/tau	84.1	71.6	83.6
MGA_6001	LOCUS_59940	sequence1:6069037..6071319(+)	partial			WP_011268475.1	ATP-binding protein	67.2	68.7	35.1
MGA_6002	LOCUS_59950	sequence1:6071320..6072558(-)	partial			WP_011021839.1	PKD domain-containing protein	63.3	29.9	41.0
MGA_6003	LOCUS_59960	sequence1:6072521..6073390(-)	frameshift,internal_stop_codon	6072646..6072648(-)	6072449,6072805,6072934,6072937,6072492,6072940,6072880,6072627,6072663,6072922,6072669,6072671	WP_010886091.1	PE family protein	50.5	24.1	41.8
MGA_6004	LOCUS_59970	sequence1:6073523..6074887(-)	partial			WP_048066275.1	PKD domain-containing protein	57.9	16.1	49.3
MGA_6012	LOCUS_60050	sequence1:6082522..6082920(+)	frameshift		6082776,6082963	WP_005086251.1	hypothetical protein	80.3	26.5	46.2
MGA_6013	LOCUS_60060	sequence1:6082986..6083840(+)	frameshift		6082776,6082963	WP_005086251.1	hypothetical protein	99.6	64.0	65.4
MGA_6014	LOCUS_60070	sequence1:6083837..6084262(+)	frameshift		6084224,6084199	WP_011729335.1	hypothetical protein	81.6	33.6	50.0
MGA_6015	LOCUS_60080	sequence1:6084232..6084915(+)	frameshift		6084224,6084199	WP_011729335.1	hypothetical protein	100.0	62.3	44.1
MGA_6021	LOCUS_60140	sequence1:6087920..6088162(+)	frameshift		6088132	WP_003899655.1	SDR family NAD(P)-dependent oxidoreductase	62.5	16.2	86.0
MGA_6026	LOCUS_60190	sequence1:6090549..6090767(-)	frameshift		6091037,6090878	WP_011726818.1	aromatic ring-hydroxylating dioxygenase subunit alpha	100.0	17.1	84.7
MGA_6027	LOCUS_60200	sequence1:6090930..6091814(-)	frameshift		6090881,6091037	WP_011726818.1	aromatic ring-hydroxylating dioxygenase subunit alpha	86.7	60.6	72.5
MGA_6029	LOCUS_60220	sequence1:6092568..6092888(-)	partial			WP_014876727.1	ferredoxin--NADP reductase	93.4	27.9	65.7
MGA_6031	LOCUS_60240	sequence1:6093411..6094100(-)	frameshift		6094134	WP_011726822.1	amidohydrolase family protein	98.3	53.7	84.0
MGA_6036	LOCUS_60290	sequence1:6100228..6101070(+)	frameshift		6100223	WP_003420435.1	ATP-dependent DNA ligase	60.7	47.5	85.3
MGA_6042	LOCUS_60350	sequence1:6105066..6105944(+)	partial			WP_003976843.1	DUF1772 domain-containing protein	44.2	81.8	38.2
MGA_6057	LOCUS_60500	sequence1:6118088..6118984(+)	partial			WP_064243032.1	AraC family transcriptional regulator	45.3	40.2	35.6
MGA_6060	LOCUS_60530	sequence1:6119705..6120865(+)	partial			WP_003414891.1	phthiodiolone/phenolphthiodiolone dimycocerosates ketoreductase	66.3	66.4	26.2
MGA_6066	LOCUS_60590	sequence1:6126379..6126696(-)	frameshift,internal_stop_codon	6126560..6126562(-)	6126176,6126369,6126432,6126179,6126180,6126183,6126411,6126381,6126158,6126414,6126131,6126132,6126454,6126134,6126141	WP_010886107.1	PE family protein	82.9	11.3	58.6
MGA_6067	LOCUS_60600	sequence1:6127054..6130224(+)	frameshift		6129921	WP_011731067.1	non-ribosomal peptide synthetase	89.5	72.2	72.4
MGA_6068	LOCUS_60610	sequence1:6130158..6130556(+)	frameshift		6129921,6130524,6130566	WP_011731067.1	non-ribosomal peptide synthetase	94.7	9.6	54.8
MGA_6069	LOCUS_60620	sequence1:6130561..6130950(+)	frameshift		6130532,6130565	WP_011731067.1	non-ribosomal peptide synthetase	82.2	8.1	88.7
MGA_6072	LOCUS_60650	sequence1:6132602..6135328(-)	frameshift		6132426,6132667	WP_011726759.1	adenylate/guanylate cyclase domain-containing protein	96.8	84.0	51.5
MGA_6076	LOCUS_60690	sequence1:6136788..6138047(-)	partial			WP_005809350.1	alkyl/aryl-sulfatase	68.5	66.0	29.8
MGA_6080	LOCUS_60730	sequence1:6140303..6140980(+)	frameshift		6140301	WP_003904991.1	hypothetical protein	96.9	57.5	78.9
MGA_6094	LOCUS_60870	sequence1:6151686..6152303(+)	frameshift		6151560	WP_011731216.1	SDR family oxidoreductase	100.0	80.5	73.2
MGA_6096	LOCUS_60890	sequence1:6153623..6154225(+)	partial			WP_012804114.1	TetR/AcrR family transcriptional regulator	73.5	64.0	32.9
MGA_6098	LOCUS_60910	sequence1:6155210..6156346(-)	frameshift		6156368,6156612	WP_003900750.1	alkyl/aryl-sulfatase	100.0	60.4	74.3
MGA_6107	LOCUS_61000	sequence1:6163129..6163779(+)	frameshift		6163052	WP_163719979.1	phosphotransferase family protein	100.0	65.1	85.6
MGA_6118	LOCUS_61110	sequence1:6172968..6174716(+)	partial			WP_011727491.1	bifunctional serine/threonine-protein kinase/transporter substrate-binding domain-containing protein	45.9	43.9	54.9
MGA_6121	LOCUS_61140	sequence1:6178080..6178301(+)	frameshift		6178262,6178455	WP_003900754.1	proteasome activator protein Bpa	83.6	31.0	68.9
MGA_6122	LOCUS_61150	sequence1:6178467..6178634(+)	frameshift		6178262,6178455	WP_011731234.1	bacterial proteasome activator family protein	74.5	23.4	90.2
MGA_6128	LOCUS_61210	sequence1:6183426..6183677(+)	partial			WP_002118032.1	acyl carrier protein	73.5	70.9	41.0
MGA_6133	LOCUS_61260	sequence1:6191070..6192920(+)	partial			WP_010950791.1	PE family protein	21.3	20.7	58.0
MGA_6136	LOCUS_61290	sequence1:6193909..6194931(+)	frameshift		6193824,6193872	WP_013228114.1	flotillin family protein	94.4	83.8	66.7
MGA_6141	LOCUS_61340	sequence1:6198126..6200303(+)	partial			WP_003899694.1	galactan 5-O-arabinofuranosyltransferase	54.5	61.3	75.7
MGA_6150	LOCUS_61430	sequence1:6215792..6216739(+)	frameshift		6216521,6216340	WP_003900757.1	DNA alkylation response protein	58.4	31.0	75.5
MGA_6151	LOCUS_61440	sequence1:6216634..6217566(+)	frameshift		6216524	WP_003900757.1	DNA alkylation response protein	99.0	51.8	82.7
MGA_6153	LOCUS_61460	sequence1:6219244..6224673(-)	partial			WP_003902557.1	polyketide synthase Pks13	74.7	77.2	82.1
MGA_6155	LOCUS_61480	sequence1:6226874..6227278(-)	frameshift		6227279	WP_003420779.1	phospholipase	99.3	39.6	81.2
MGA_6170	LOCUS_61630	sequence1:6245233..6245430(+)	frameshift		6245228	WP_003420809.1	PE family protein	96.9	13.1	63.6
MGA_6178	LOCUS_61710	sequence1:6251252..6251614(+)	partial			WP_003420830.1	aminoglycoside 3'-phosphotransferase	93.3	45.8	67.8
MGA_6181	LOCUS_61740	sequence1:6253674..6254561(-)	frameshift		6254617	WP_003899716.1	NAD(P)/FAD-dependent oxidoreductase	99.7	55.6	76.3
MGA_6182	LOCUS_61750	sequence1:6254558..6255247(-)	frameshift		6254620	WP_003899716.1	NAD(P)/FAD-dependent oxidoreductase	90.4	38.6	86.5
MGA_6187	LOCUS_61800	sequence1:6258546..6259424(+)	frameshift		6259242,6258444	WP_003420892.1	septum formation family protein	76.0	49.2	79.3
MGA_6191	LOCUS_61840	sequence1:6260671..6260994(-)	frameshift		6261042,6261087	WP_003420906.1	prephenate dehydratase	97.2	32.4	80.8
MGA_6192	LOCUS_61850	sequence1:6261049..6261603(-)	frameshift		6261042,6261093	WP_003420906.1	prephenate dehydratase	92.4	53.6	71.5
MGA_6194	LOCUS_61870	sequence1:6262595..6263731(+)	frameshift		6262697,6262730,6262651	WP_235624060.1	LCP family protein	77.8	68.7	68.7
MGA_6203	LOCUS_61960	sequence1:6270595..6271059(+)	partial			WP_003399779.1	histone-like protein Hns	50.0	58.2	61.5
MGA_6214	LOCUS_62070	sequence1:6284391..6285308(+)	frameshift		6284217	WP_003399818.1	MinD/ParA family protein	99.3	77.9	75.3
MGA_6229	LOCUS_62220	sequence1:6300640..6302028(+)	frameshift		6300592,6300626,6300658,6301140,6300759,6300601	WP_010907486.1	MinD/ParA family protein	63.2	49.8	64.7
MGA_6230	LOCUS_62230	sequence1:6302025..6302639(+)	frameshift		6302690,6302534	WP_003399976.1	type VII secretion system ESX-1 subunit EccD1	75.0	29.9	81.7
MGA_6231	LOCUS_62240	sequence1:6302629..6303561(+)	frameshift		6302696,6302534	WP_003399976.1	type VII secretion system ESX-1 subunit EccD1	93.2	56.6	66.4
MGA_6233	LOCUS_62260	sequence1:6304460..6305653(-)	frameshift		6305757	WP_010886183.1	type VII secretion system ESX-1 associated protein EspK	100.0	55.1	51.2
MGA_6234	LOCUS_62270	sequence1:6305650..6306702(-)	frameshift		6305784	WP_010950952.1	type VII secretion system ESX-1 associated protein EspK	90.0	41.3	48.2
MGA_6240	LOCUS_62330	sequence1:6312990..6314042(+)	frameshift		6313910	WP_003410735.1	serine/threonine protein kinase PknJ	87.4	51.8	63.2
MGA_6242	LOCUS_62350	sequence1:6314776..6316461(+)	partial			WP_003410735.1	serine/threonine protein kinase PknJ	47.1	44.8	65.7
MGA_6245	LOCUS_62380	sequence1:6319861..6320775(-)	frameshift		6320928,6320784,6320883,6320076,6319997	WP_003400012.1	type VII secretion system ESX-2 serine protease mycosin MycP2	76.6	42.7	74.6
MGA_6246	LOCUS_62390	sequence1:6320908..6321471(-)	frameshift		6320928,6320883,6320784	WP_003400012.1	type VII secretion system ESX-2 serine protease mycosin MycP2	71.1	24.2	66.2
MGA_6254	LOCUS_62470	sequence1:6328380..6328970(+)	frameshift		6328356	WP_003400124.1	NUDIX domain-containing protein	99.5	79.0	89.3
MGA_6263	LOCUS_62560	sequence1:6340438..6341010(-)	frameshift		6341065	WP_003400175.1	ParB/RepB/Spo0J family partition protein	97.9	56.4	87.6
MGA_6264	LOCUS_62570	sequence1:6340994..6341314(-)	frameshift		6341064,6341388	WP_003400175.1	ParB/RepB/Spo0J family partition protein	73.6	22.7	75.6
