{
    "type": "genome",
    "identifier": "GCF_021728535.1",
    "organism": "Wocania arenilitoris",
    "title": "Wocania arenilitoris",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "Chungbuk national university",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_021728535.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN25221484",
        "wgs_master": "JAKKDU000000000.1",
        "refseq_category": "reference genome",
        "taxid": "2044858",
        "species_taxid": "2044858",
        "organism_name": "Wocania arenilitoris",
        "infraspecific_name": "strain=HMF6543",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Scaffold",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/01/30",
        "asm_name": "ASM2172853v1",
        "asm_submitter": "Chungbuk national university",
        "gbrs_paired_asm": "GCA_021728535.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/021/728/535/GCF_021728535.1_ASM2172853v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "3491608",
        "genome_size_ungapped": "3491568",
        "gc_percent": "32.000000",
        "replicon_count": "0",
        "scaffold_count": "37",
        "contig_count": "37",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_021728535.1-RS_2024_08_08",
        "annotation_date": "2024-08-08",
        "total_gene_count": "3067",
        "protein_coding_gene_count": "2972",
        "non_coding_gene_count": "41",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-01-30",
    "dateModified": "2022-01-30",
    "datePublished": "2022-01-30",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Wocania arenilitoris"
        ],
        "sample_taxid": [
            "2044858"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "South Korea: South Sea"
        ],
        "sample_host_location_id": [],
        "data_size": "0.971 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "3491608",
        "Number of Sequences": "37",
        "Longest Sequences (bp)": "314214",
        "N50 (bp)": "204683",
        "Gap Ratio (%)": "0.001146",
        "GCcontent (%)": "32.0",
        "Number of CDSs": "3009",
        "Average Protein Length": "345.0",
        "Coding Ratio (%)": "89.2",
        "Number of rRNAs": "3",
        "Number of tRNAs": "35",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Algibacter marinivivus",
                "strain": "strain=ZY111",
                "accession": "GCA_003143755.1",
                "taxid": 2100723,
                "species_taxid": 2100723,
                "relation_to_type": "type",
                "validated": true,
                "ani": 79.3916,
                "matched_fragments": 507,
                "total_fragments": 1145,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Algibacter amylolyticus",
                "strain": "strain=DSM 29199",
                "accession": "GCA_014202225.1",
                "taxid": 1608400,
                "species_taxid": 1608400,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.8731,
                "matched_fragments": 445,
                "total_fragments": 1145,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Arenitalea lutea",
                "strain": "strain=CGMCC 1.12213",
                "accession": "GCA_900141715.1",
                "taxid": 1178825,
                "species_taxid": 1178825,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.871,
                "matched_fragments": 443,
                "total_fragments": 1145,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Arenitalea lutea",
                "strain": "strain=P7-3-5",
                "accession": "GCA_000283015.1",
                "taxid": 1178825,
                "species_taxid": 1178825,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.8597,
                "matched_fragments": 444,
                "total_fragments": 1145,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Flavivirga rizhaonensis",
                "strain": "strain=RZ03",
                "accession": "GCA_004791695.1",
                "taxid": 2559571,
                "species_taxid": 2559571,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.7591,
                "matched_fragments": 472,
                "total_fragments": 1145,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Algibacter pectinivorans",
                "strain": "strain=DSM 25730",
                "accession": "GCA_900112595.1",
                "taxid": 870482,
                "species_taxid": 870482,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.7225,
                "matched_fragments": 439,
                "total_fragments": 1145,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Seonamhaeicola maritimus",
                "strain": "strain=1505",
                "accession": "GCA_008056315.1",
                "taxid": 2591822,
                "species_taxid": 2591822,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.5353,
                "matched_fragments": 415,
                "total_fragments": 1145,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Flavivirga algicola",
                "strain": "strain=Y03",
                "accession": "GCA_012910715.1",
                "taxid": 2729136,
                "species_taxid": 2729136,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.4688,
                "matched_fragments": 449,
                "total_fragments": 1145,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Algibacter lectus",
                "strain": "strain=DSM 15365",
                "accession": "GCA_900112395.1",
                "taxid": 221126,
                "species_taxid": 221126,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.3277,
                "matched_fragments": 407,
                "total_fragments": 1145,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Mariniflexile gromovii",
                "strain": "strain=KCTC 12570",
                "accession": "GCA_017814435.1",
                "taxid": 362523,
                "species_taxid": 362523,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.2631,
                "matched_fragments": 400,
                "total_fragments": 1145,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Mariniflexile fucanivorans",
                "strain": "strain=DSM 18792",
                "accession": "GCA_004341235.1",
                "taxid": 264023,
                "species_taxid": 264023,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.2541,
                "matched_fragments": 436,
                "total_fragments": 1145,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Flavivirga eckloniae",
                "strain": "strain=ECD14",
                "accession": "GCA_002886045.1",
                "taxid": 1803846,
                "species_taxid": 1803846,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.204,
                "matched_fragments": 444,
                "total_fragments": 1145,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Algibacter pacificus",
                "strain": "strain=H164",
                "accession": "GCA_008033385.1",
                "taxid": 2599389,
                "species_taxid": 2599389,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.1981,
                "matched_fragments": 383,
                "total_fragments": 1145,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Hyunsoonleella flava",
                "strain": "strain=T58",
                "accession": "GCA_004310325.1",
                "taxid": 2527939,
                "species_taxid": 2527939,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.1732,
                "matched_fragments": 330,
                "total_fragments": 1145,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Hyunsoonleella ulvae",
                "strain": "strain=HU1-3",
                "accession": "GCA_016827605.1",
                "taxid": 2799948,
                "species_taxid": 2799948,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.8226,
                "matched_fragments": 346,
                "total_fragments": 1145,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Hanstruepera marina",
                "strain": "strain=NBU2968",
                "accession": "GCA_019880635.1",
                "taxid": 2873265,
                "species_taxid": 2873265,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.6221,
                "matched_fragments": 252,
                "total_fragments": 1145,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Winogradskyella echinorum",
                "strain": "strain=KCTC 22026",
                "accession": "GCA_014284085.1",
                "taxid": 538189,
                "species_taxid": 538189,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.5985,
                "matched_fragments": 275,
                "total_fragments": 1145,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Winogradskyella thalassocola",
                "strain": "strain=DSM 15363",
                "accession": "GCA_900099995.1",
                "taxid": 262004,
                "species_taxid": 262004,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.2539,
                "matched_fragments": 264,
                "total_fragments": 1145,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 100.0,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCF_000789235.1",
                "gtdb_species": "s__Wocania ichthyoenteri",
                "ani": 82.9867,
                "matched_fragments": 739,
                "total_fragments": 1145,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Wocania",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_002741945.1",
                "gtdb_species": "s__Wocania sp002741945",
                "ani": 81.4807,
                "matched_fragments": 701,
                "total_fragments": 1145,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Wocania",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_900114265.1",
                "gtdb_species": "s__Flaviramulus basaltis",
                "ani": 79.5208,
                "matched_fragments": 513,
                "total_fragments": 1145,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flaviramulus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_003143755.1",
                "gtdb_species": "s__Algibacter_B sp003143755",
                "ani": 79.3826,
                "matched_fragments": 508,
                "total_fragments": 1145,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Algibacter_B",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_900141715.1",
                "gtdb_species": "s__Arenitalea lutea",
                "ani": 78.8988,
                "matched_fragments": 440,
                "total_fragments": 1145,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Arenitalea",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "100.00",
                "min_intra_species_ani": "100.00",
                "mean_intra_species_af": "1.00",
                "min_intra_species_af": "1.00",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCF_004791695.1",
                "gtdb_species": "s__Flavivirga rizhaonensis",
                "ani": 78.765,
                "matched_fragments": 471,
                "total_fragments": 1145,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavivirga",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_001747085.1",
                "gtdb_species": "s__Algibacter_C aquaticus",
                "ani": 78.5567,
                "matched_fragments": 476,
                "total_fragments": 1145,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Algibacter_C",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_905480415.1",
                "gtdb_species": "s__Algibacter_B sp905480415",
                "ani": 78.5353,
                "matched_fragments": 405,
                "total_fragments": 1145,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Algibacter_B",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_009498295.1",
                "gtdb_species": "s__Wocania sp009498295",
                "ani": 78.4888,
                "matched_fragments": 406,
                "total_fragments": 1145,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Wocania",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_004341235.1",
                "gtdb_species": "s__Mariniflexile fucanivorans",
                "ani": 78.2365,
                "matched_fragments": 438,
                "total_fragments": 1145,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Mariniflexile",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_007997385.1",
                "gtdb_species": "s__Seonamhaeicola algicola",
                "ani": 78.2329,
                "matched_fragments": 410,
                "total_fragments": 1145,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Seonamhaeicola",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_008033385.1",
                "gtdb_species": "s__Algibacter pacificus",
                "ani": 78.2105,
                "matched_fragments": 383,
                "total_fragments": 1145,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Algibacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_003148645.1",
                "gtdb_species": "s__Xanthomarina spongicola",
                "ani": 78.1744,
                "matched_fragments": 313,
                "total_fragments": 1145,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Xanthomarina",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_002441545.1",
                "gtdb_species": "s__Yeosuana sp002441545",
                "ani": 77.802,
                "matched_fragments": 323,
                "total_fragments": 1145,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Yeosuana",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_genome_taxon": [
        "Wocania",
        "arenilitoris"
    ],
    "quality": 4,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}