{ "tc_result": [ { "organism_name": "Solitalea longa", "strain": "strain=HR-AV", "accession": "GCA_002920915.1", "taxid": 2079460, "species_taxid": 2079460, "relation_to_type": "type", "validated": true, "ani": 79.4144, "matched_fragments": 434, "total_fragments": 1467, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Solitalea canadensis", "strain": "strain=DSM 3403", "accession": "GCA_000242635.3", "taxid": 995, "species_taxid": 995, "relation_to_type": "type", "validated": true, "ani": 78.8746, "matched_fragments": 384, "total_fragments": 1467, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingobacterium spiritivorum", "strain": "strain=FDAARGOS_1144", "accession": "GCA_016725645.1", "taxid": 258, "species_taxid": 258, "relation_to_type": "suspected-type", "validated": true, "ani": 78.6808, "matched_fragments": 50, "total_fragments": 1467, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Solitalea koreensis", "strain": "strain=DSM 21342", "accession": "GCA_900182575.1", "taxid": 543615, "species_taxid": 543615, "relation_to_type": "type", "validated": true, "ani": 78.2452, "matched_fragments": 214, "total_fragments": 1467, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pedobacter chitinilyticus", "strain": "strain=CM134L-2", "accession": "GCA_004025525.1", "taxid": 2233776, "species_taxid": 2233776, "relation_to_type": "type", "validated": true, "ani": 77.2348, "matched_fragments": 50, "total_fragments": 1467, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mucilaginibacter auburnensis", "strain": "strain=DSM 28175", "accession": "GCA_002797815.1", "taxid": 1457233, "species_taxid": 1457233, "relation_to_type": "type", "validated": true, "ani": 77.2281, "matched_fragments": 51, "total_fragments": 1467, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pedobacter mucosus", "strain": "strain=Q8-18", "accession": "GCA_022200785.1", "taxid": 2895286, "species_taxid": 2895286, "relation_to_type": "type", "validated": true, "ani": 77.1865, "matched_fragments": 55, "total_fragments": 1467, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pedobacter psychrodurus", "strain": "strain=RP-3-21", "accession": "GCA_004331735.1", "taxid": 2530456, "species_taxid": 2530456, "relation_to_type": "type", "validated": true, "ani": 77.0158, "matched_fragments": 54, "total_fragments": 1467, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pedobacter kyonggii", "strain": "strain=K-4-11-1", "accession": "GCA_004310665.1", "taxid": 1926871, "species_taxid": 1926871, "relation_to_type": "type", "validated": true, "ani": 76.6889, "matched_fragments": 58, "total_fragments": 1467, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pedobacter borealis", "strain": "strain=DSM 19626", "accession": "GCA_000708285.2", "taxid": 475254, "species_taxid": 475254, "relation_to_type": "type", "validated": true, "ani": 76.632, "matched_fragments": 60, "total_fragments": 1467, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pedobacter xixiisoli", "strain": "strain=CGMCC 1.12803", "accession": "GCA_900215335.1", "taxid": 1476464, "species_taxid": 1476464, "relation_to_type": "type", "validated": true, "ani": 76.5281, "matched_fragments": 52, "total_fragments": 1467, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pedobacter xixiisoli", "strain": "strain=S27", "accession": "GCA_005925365.1", "taxid": 1476464, "species_taxid": 1476464, "relation_to_type": "type", "validated": true, "ani": 76.5281, "matched_fragments": 52, "total_fragments": 1467, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pedobacter ureilyticus", "strain": "strain=THG-T11", "accession": "GCA_005925345.1", "taxid": 1393051, "species_taxid": 1393051, "relation_to_type": "type", "validated": true, "ani": 76.4012, "matched_fragments": 52, "total_fragments": 1467, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mucilaginibacter aquatilis", "strain": "strain=HME9299", "accession": "GCA_009755275.1", "taxid": 1517760, "species_taxid": 1517760, "relation_to_type": "type", "validated": true, "ani": 76.3459, "matched_fragments": 62, "total_fragments": 1467, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pedobacter foliorum", "strain": "strain=LMG 31463", "accession": "GCA_013266735.1", "taxid": 2739058, "species_taxid": 2739058, "relation_to_type": "type", "validated": true, "ani": 76.2416, "matched_fragments": 63, "total_fragments": 1467, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_002920915.1", "gtdb_species": "s__Solitalea longa", "ani": 79.4355, "matched_fragments": 435, "total_fragments": 1467, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Sphingobacteriales;f__Sphingobacteriaceae;g__Solitalea", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000242635.2", "gtdb_species": "s__Solitalea canadensis", "ani": 78.8398, "matched_fragments": 383, "total_fragments": 1467, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Sphingobacteriales;f__Sphingobacteriaceae;g__Solitalea", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000190735.1", "gtdb_species": "s__Pelobium saltans", "ani": 78.2931, "matched_fragments": 50, "total_fragments": 1467, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Sphingobacteriales;f__Sphingobacteriaceae;g__Pelobium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_900182575.1", "gtdb_species": "s__Solitalea koreensis", "ani": 78.2452, "matched_fragments": 214, "total_fragments": 1467, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Sphingobacteriales;f__Sphingobacteriaceae;g__Solitalea", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_016724845.1", "gtdb_species": "s__Sphingobacterium spiritivorum_A", "ani": 77.9148, "matched_fragments": 57, "total_fragments": 1467, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Sphingobacteriales;f__Sphingobacteriaceae;g__Sphingobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.88", "min_intra_species_ani": "95.78", "mean_intra_species_af": "0.94", "min_intra_species_af": "0.88", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCA_002151545.1", "gtdb_species": "s__Pedobacter sp002151545", "ani": 77.8155, "matched_fragments": 55, "total_fragments": 1467, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Sphingobacteriales;f__Sphingobacteriaceae;g__Pedobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_011303555.1", "gtdb_species": "s__Pedobacter sp003852395", "ani": 77.4325, "matched_fragments": 65, "total_fragments": 1467, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Sphingobacteriales;f__Sphingobacteriaceae;g__Pedobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.47", "min_intra_species_ani": "99.47", "mean_intra_species_af": "0.90", "min_intra_species_af": "0.90", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_014692875.1", "gtdb_species": "s__Pedobacter sp011759615", "ani": 77.1915, "matched_fragments": 67, "total_fragments": 1467, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Sphingobacteriales;f__Sphingobacteriaceae;g__Pedobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.16", "min_intra_species_ani": "98.15", "mean_intra_species_af": "0.91", "min_intra_species_af": "0.91", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_004331735.1", "gtdb_species": "s__Pedobacter sp004331735", "ani": 77.0158, "matched_fragments": 54, "total_fragments": 1467, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Sphingobacteriales;f__Sphingobacteriaceae;g__Pedobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_004331675.1", "gtdb_species": "s__Pedobacter sp004331675", "ani": 76.7419, "matched_fragments": 50, "total_fragments": 1467, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Sphingobacteriales;f__Sphingobacteriaceae;g__Pedobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_014205835.1", "gtdb_species": "s__Pedobacter sp014205835", "ani": 76.6712, "matched_fragments": 62, "total_fragments": 1467, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Sphingobacteriales;f__Sphingobacteriaceae;g__Pedobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_900215335.1", "gtdb_species": "s__Pedobacter xixiisoli", "ani": 76.5206, "matched_fragments": 51, "total_fragments": 1467, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Sphingobacteriales;f__Sphingobacteriaceae;g__Pedobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_005925345.1", "gtdb_species": "s__Pedobacter ureilyticus", "ani": 76.4266, "matched_fragments": 50, "total_fragments": 1467, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Sphingobacteriales;f__Sphingobacteriaceae;g__Pedobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_009755275.1", "gtdb_species": "s__Mucilaginibacter aquatilis", "ani": 76.3576, "matched_fragments": 59, "total_fragments": 1467, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Sphingobacteriales;f__Sphingobacteriaceae;g__Mucilaginibacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_014196715.1", "gtdb_species": "s__Pedobacter zeae", "ani": 76.3258, "matched_fragments": 54, "total_fragments": 1467, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Sphingobacteriales;f__Sphingobacteriaceae;g__Pedobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_013266735.1", "gtdb_species": "s__Pedobacter foliorum", "ani": 76.2348, "matched_fragments": 62, "total_fragments": 1467, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Sphingobacteriales;f__Sphingobacteriaceae;g__Pedobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }