{ "tc_result": [ { "organism_name": "Methylobacterium iners", "strain": "strain=DSM 19015", "accession": "GCA_022179305.1", "taxid": 418707, "species_taxid": 418707, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 1733, "total_fragments": 1740, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Methylobacterium oxalidis", "strain": "strain=NBRC 107715", "accession": "GCA_007992195.1", "taxid": 944322, "species_taxid": 944322, "relation_to_type": "type", "validated": true, "ani": 82.4757, "matched_fragments": 895, "total_fragments": 1740, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Methylobacterium oxalidis", "strain": "strain=DSM 24028", "accession": "GCA_022179505.1", "taxid": 944322, "species_taxid": 944322, "relation_to_type": "type", "validated": true, "ani": 82.4097, "matched_fragments": 900, "total_fragments": 1740, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Methylobacterium dankookense", "strain": "strain=SW08-7", "accession": "GCA_902141855.1", "taxid": 560405, "species_taxid": 560405, "relation_to_type": "type", "validated": true, "ani": 82.3335, "matched_fragments": 919, "total_fragments": 1740, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Methylobacterium dankookense", "strain": "strain=DSM 22415", "accession": "GCA_022179165.1", "taxid": 560405, "species_taxid": 560405, "relation_to_type": "type", "validated": true, "ani": 82.3129, "matched_fragments": 880, "total_fragments": 1740, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Methylobacterium jeotgali", "strain": "strain=LMG 23639", "accession": "GCA_022179345.1", "taxid": 381630, "species_taxid": 381630, "relation_to_type": "type", "validated": true, "ani": 82.1974, "matched_fragments": 804, "total_fragments": 1740, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Methylobacterium goesingense", "strain": "strain=DSM 21331", "accession": "GCA_022179225.1", "taxid": 243690, "species_taxid": 243690, "relation_to_type": "type", "validated": true, "ani": 82.1619, "matched_fragments": 861, "total_fragments": 1740, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Methylobacterium durans", "strain": "strain=17SD2-17", "accession": "GCA_003173715.1", "taxid": 2202825, "species_taxid": 2202825, "relation_to_type": "type", "validated": true, "ani": 82.1607, "matched_fragments": 924, "total_fragments": 1740, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Methylobacterium soli", "strain": "strain=KCTC 22810", "accession": "GCA_022179555.1", "taxid": 553447, "species_taxid": 553447, "relation_to_type": "type", "validated": true, "ani": 82.0211, "matched_fragments": 738, "total_fragments": 1740, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Methylobacterium bullatum", "strain": "strain=DSM 21893", "accession": "GCA_022179105.1", "taxid": 570505, "species_taxid": 570505, "relation_to_type": "type", "validated": true, "ani": 81.9789, "matched_fragments": 860, "total_fragments": 1740, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Methylobacterium hispanicum", "strain": "strain=DSM 16372", "accession": "GCA_022179285.1", "taxid": 270350, "species_taxid": 270350, "relation_to_type": "type", "validated": true, "ani": 81.9315, "matched_fragments": 903, "total_fragments": 1740, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Methylobacterium cerastii", "strain": "strain=DSM 23679", "accession": "GCA_022179125.1", "taxid": 932741, "species_taxid": 932741, "relation_to_type": "type", "validated": true, "ani": 81.8923, "matched_fragments": 895, "total_fragments": 1740, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Methylobacterium adhaesivum", "strain": "strain=DSM 17169", "accession": "GCA_022179065.1", "taxid": 333297, "species_taxid": 333297, "relation_to_type": "type", "validated": true, "ani": 81.8606, "matched_fragments": 834, "total_fragments": 1740, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Methylobacterium bullatum", "strain": "strain=LMG 24788", "accession": "GCA_014845095.1", "taxid": 570505, "species_taxid": 570505, "relation_to_type": "type", "validated": true, "ani": 81.8597, "matched_fragments": 788, "total_fragments": 1740, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Methylobacterium gossipiicola", "strain": "strain=Gh-105", "accession": "GCA_900113485.1", "taxid": 582675, "species_taxid": 582675, "relation_to_type": "type", "validated": true, "ani": 81.615, "matched_fragments": 825, "total_fragments": 1740, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_001423265.1", "gtdb_species": "s__Methylobacterium sp001423265", "ani": 82.9409, "matched_fragments": 929, "total_fragments": 1740, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Beijerinckiaceae;g__Methylobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.78", "min_intra_species_ani": "98.73", "mean_intra_species_af": "0.95", "min_intra_species_af": "0.94", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_001422885.1", "gtdb_species": "s__Methylobacterium sp001422885", "ani": 82.6431, "matched_fragments": 909, "total_fragments": 1740, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Beijerinckiaceae;g__Methylobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001422375.1", "gtdb_species": "s__Methylobacterium sp001422375", "ani": 82.4659, "matched_fragments": 892, "total_fragments": 1740, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Beijerinckiaceae;g__Methylobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.25", "min_intra_species_ani": "98.25", "mean_intra_species_af": "0.90", "min_intra_species_af": "0.90", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_003217615.1", "gtdb_species": "s__Methylobacterium sp003217615", "ani": 82.4059, "matched_fragments": 901, "total_fragments": 1740, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Beijerinckiaceae;g__Methylobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_007992195.1", "gtdb_species": "s__Methylobacterium oxalidis", "ani": 82.35, "matched_fragments": 907, "total_fragments": 1740, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Beijerinckiaceae;g__Methylobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001424705.1", "gtdb_species": "s__Methylobacterium sp001424705", "ani": 82.3267, "matched_fragments": 923, "total_fragments": 1740, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Beijerinckiaceae;g__Methylobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.56", "min_intra_species_ani": "98.52", "mean_intra_species_af": "0.92", "min_intra_species_af": "0.91", "num_clustered_genomes": 5, "status": "-" }, { "accession": "GCF_902141855.1", "gtdb_species": "s__Methylobacterium dankookense", "ani": 82.3164, "matched_fragments": 921, "total_fragments": 1740, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Beijerinckiaceae;g__Methylobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001423085.1", "gtdb_species": "s__Methylobacterium sp001423085", "ani": 82.1688, "matched_fragments": 902, "total_fragments": 1740, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Beijerinckiaceae;g__Methylobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.83", "min_intra_species_ani": "97.83", "mean_intra_species_af": "0.87", "min_intra_species_af": "0.87", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_008039875.1", "gtdb_species": "s__Methylobacterium sp008039875", "ani": 81.9921, "matched_fragments": 899, "total_fragments": 1740, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Beijerinckiaceae;g__Methylobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.26", "min_intra_species_ani": "97.89", "mean_intra_species_af": "0.94", "min_intra_species_af": "0.87", "num_clustered_genomes": 4, "status": "-" }, { "accession": "GCF_001423295.1", "gtdb_species": "s__Methylobacterium sp001423295", "ani": 81.9833, "matched_fragments": 866, "total_fragments": 1740, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Beijerinckiaceae;g__Methylobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.75", "min_intra_species_ani": "98.70", "mean_intra_species_af": "0.92", "min_intra_species_af": "0.92", "num_clustered_genomes": 5, "status": "-" }, { "accession": "GCF_014845095.1", "gtdb_species": "s__Methylobacterium bullatum", "ani": 81.8661, "matched_fragments": 789, "total_fragments": 1740, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Beijerinckiaceae;g__Methylobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.58", "min_intra_species_ani": "95.73", "mean_intra_species_af": "0.88", "min_intra_species_af": "0.87", "num_clustered_genomes": 6, "status": "-" }, { "accession": "GCF_001422985.1", "gtdb_species": "s__Methylobacterium sp001422985", "ani": 81.7876, "matched_fragments": 875, "total_fragments": 1740, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Beijerinckiaceae;g__Methylobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.40", "min_intra_species_ani": "98.40", "mean_intra_species_af": "0.91", "min_intra_species_af": "0.91", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_000519085.1", "gtdb_species": "s__Methylobacterium sp000519085", "ani": 81.7391, "matched_fragments": 853, "total_fragments": 1740, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Beijerinckiaceae;g__Methylobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_900113485.1", "gtdb_species": "s__Methylobacterium gossipiicola", "ani": 81.6183, "matched_fragments": 824, "total_fragments": 1740, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Beijerinckiaceae;g__Methylobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001422815.1", "gtdb_species": "s__Methylobacterium sp001422815", "ani": 81.2115, "matched_fragments": 858, "total_fragments": 1740, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Beijerinckiaceae;g__Methylobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.57", "min_intra_species_ani": "97.58", "mean_intra_species_af": "0.90", "min_intra_species_af": "0.88", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_001653715.1", "gtdb_species": "s__Methylobacterium platani", "ani": 80.915, "matched_fragments": 834, "total_fragments": 1740, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Beijerinckiaceae;g__Methylobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.94", "min_intra_species_ani": "99.94", "mean_intra_species_af": "0.97", "min_intra_species_af": "0.97", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_004004555.2", "gtdb_species": "s__Methylobacterium sp004004555", "ani": 80.7728, "matched_fragments": 825, "total_fragments": 1740, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Beijerinckiaceae;g__Methylobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_019216885.1", "gtdb_species": "s__Methylobacterium sp019216885", "ani": 80.3745, "matched_fragments": 858, "total_fragments": 1740, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Beijerinckiaceae;g__Methylobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }