{ "type": "genome", "identifier": "GCF_022359095.1", "organism": "Moraxella tetraodonis", "title": "Moraxella tetraodonis", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Institute of Life Sciences", "publication": [ {} ], "properties": { "assembly_accession": "GCF_022359095.1", "bioproject": "PRJNA224116", "biosample": "SAMN15905294", "wgs_master": "JACSYB000000000.1", "refseq_category": "reference genome", "taxid": "2767221", "species_taxid": "2767221", "organism_name": "Moraxella tetraodonis", "infraspecific_name": "strain=PS-22", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2022/02/22", "asm_name": "ASM2235909v1", "asm_submitter": "Institute of Life Sciences", "gbrs_paired_asm": "GCA_022359095.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/022/359/095/GCF_022359095.1_ASM2235909v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "2724669", "genome_size_ungapped": "2724669", "gc_percent": "43.500000", "replicon_count": "0", "scaffold_count": "7", "contig_count": "7", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_022359095.1-RS_2024_03_29", "annotation_date": "2024-03-29", "total_gene_count": "2420", "protein_coding_gene_count": "2310", "non_coding_gene_count": "63", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2022-02-22", "dateModified": "2022-02-22", "datePublished": "2022-02-22", "_annotation": { "sample_count": 1, "sample_organism": [ "Moraxella tetraodonis" ], "sample_taxid": [ "2767221" ], "sample_host_organism": [ "puffer fish" ], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "India: Mahanadi River, Cuttack" ], "sample_host_location_id": [], "data_size": "0.770 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "2724669", "Number of Sequences": "7", "Longest Sequences (bp)": "2439788", "N50 (bp)": "2439788", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "43.4", "Number of CDSs": "2386", "Average Protein Length": "325.4", "Coding Ratio (%)": "85.5", "Number of rRNAs": "12", "Number of tRNAs": "47", "Number of CRISPRs": "1" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Moraxella osloensis", "strain": "strain=FDAARGOS_870", "accession": "GCA_016028755.1", "taxid": 34062, "species_taxid": 34062, "relation_to_type": "suspected-type", "validated": true, "ani": 95.0825, "matched_fragments": 754, 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2818439, "species_taxid": 2818439, "relation_to_type": "type", "validated": true, "ani": 76.1176, "matched_fragments": 90, "total_fragments": 906, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCA_014647715.1", "gtdb_species": "s__Moraxella_A cinereus", "ani": 95.6967, "matched_fragments": 757, "total_fragments": 906, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__Moraxella_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "95.56", "min_intra_species_ani": "95.32", "mean_intra_species_af": "0.87", "min_intra_species_af": "0.85", "num_clustered_genomes": 40, "status": "inconclusive" }, { "accession": "GCF_001553955.1", "gtdb_species": "s__Moraxella_A osloensis", "ani": 95.0331, "matched_fragments": 770, "total_fragments": 906, "gtdb_taxonomy": 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