# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_1	LOCUS_00010	sequence1:1..1491(+)	frameshift		1440	WP_002679195.1	NAD-dependent DNA ligase LigA	92.5	71.3	67.4
MGA_2	LOCUS_00020	sequence1:1500..2036(+)	frameshift		1440	WP_002679195.1	NAD-dependent DNA ligase LigA	79.2	22.3	58.3
MGA_5	LOCUS_00050	sequence1:3130..3696(-)	frameshift		3695	WP_002682194.1	UvrD-helicase domain-containing protein	98.9	27.9	66.1
MGA_6	LOCUS_00060	sequence1:3693..4922(-)	frameshift		3700,4975	WP_002682194.1	UvrD-helicase domain-containing protein	100.0	61.8	68.9
MGA_7	LOCUS_00070	sequence1:5386..5877(+)	frameshift		5820	WP_002678886.1	hypothetical protein	92.0	72.6	46.4
MGA_8	LOCUS_00080	sequence1:5847..6008(+)	frameshift		5820	WP_002678886.1	hypothetical protein	100.0	25.5	77.4
MGA_24	LOCUS_00240	sequence1:20222..20554(+)	frameshift		20500	WP_010957291.1	flagellar biosynthesis protein FlhF	88.2	24.2	33.3
MGA_25	LOCUS_00250	sequence1:20551..21519(+)	frameshift		20500	WP_010957291.1	flagellar biosynthesis protein FlhF	89.8	66.1	47.8
MGA_39	LOCUS_00390	sequence1:34909..35760(+)	frameshift		35704,34876	WP_002675346.1	sigma-54 dependent transcriptional regulator	95.1	56.9	71.7
MGA_40	LOCUS_00400	sequence1:35808..36233(+)	frameshift		35706	WP_002675346.1	sigma-54 dependent transcriptional regulator	98.6	29.4	59.7
MGA_42	LOCUS_00420	sequence1:36795..37493(+)	frameshift		37427	WP_002668712.1	galactose mutarotase	92.7	63.2	50.9
MGA_55	LOCUS_00550	sequence1:53822..54955(-)	frameshift		55089	WP_011071149.1	PAS domain S-box protein	98.9	20.6	39.0
MGA_56	LOCUS_00560	sequence1:55075..55962(-)	frameshift		55086	WP_164925775.1	transporter substrate-binding domain-containing protein	37.3	6.6	50.9
MGA_62	LOCUS_00620	sequence1:63692..64369(+)	frameshift		64318	WP_002671073.1	uracil phosphoribosyltransferase	97.3	61.5	63.2
MGA_63	LOCUS_00630	sequence1:64327..64764(+)	frameshift		64318	WP_002671073.1	uracil phosphoribosyltransferase	97.9	40.2	81.0
MGA_65	LOCUS_00650	sequence1:65390..65881(-)	frameshift		65943	WP_002680552.1	tRNA 4-thiouridine(8) synthase ThiI	89.0	37.5	65.5
MGA_66	LOCUS_00660	sequence1:65878..66600(-)	frameshift		65946	WP_002680552.1	tRNA 4-thiouridine(8) synthase ThiI	91.7	56.8	52.7
MGA_71	LOCUS_00710	sequence1:70149..72350(+)	frameshift		72332,72422	WP_002680585.1	hypothetical protein	97.8	49.6	24.7
MGA_72	LOCUS_00720	sequence1:72448..74523(+)	partial			WP_002680585.1	hypothetical protein	99.7	46.9	35.1
MGA_75	LOCUS_00750	sequence1:77881..78288(+)	frameshift		78276	WP_164920616.1	DNA mismatch repair protein MutS	91.1	13.8	71.5
MGA_77	LOCUS_00770	sequence1:78606..80504(+)	partial			WP_164920616.1	DNA mismatch repair protein MutS	99.4	72.4	53.9
MGA_82	LOCUS_00820	sequence1:85792..85983(+)	partial			WP_002669392.1	30S ribosomal protein S20	100.0	70.8	60.3
MGA_84	LOCUS_00840	sequence1:86667..87185(+)	frameshift		86673,87027	WP_002679415.1	apolipoprotein N-acyltransferase	64.5	20.4	49.5
MGA_85	LOCUS_00850	sequence1:87101..88108(+)	frameshift		87026	WP_002679415.1	apolipoprotein N-acyltransferase	98.8	61.9	50.0
MGA_86	LOCUS_00860	sequence1:88189..88800(+)	partial			WP_012583597.1	response regulator transcription factor	59.1	48.3	44.2
MGA_89	LOCUS_00890	sequence1:89625..89876(+)	frameshift		89846	WP_011254584.1	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase	90.4	14.1	41.3
MGA_90	LOCUS_00900	sequence1:90038..91162(+)	frameshift		89864	WP_002371461.1	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L-lysine ligase	93.6	68.9	37.1
MGA_94	LOCUS_00940	sequence1:96331..97605(+)	partial			WP_011948553.1	esterase EstA	92.5	74.4	28.5
MGA_104	LOCUS_01040	sequence1:111991..112590(+)	frameshift		112551	WP_002679070.1	glucose-1-phosphate thymidylyltransferase RfbA	99.0	67.0	76.1
MGA_105	LOCUS_01050	sequence1:112653..112865(+)	frameshift		112554	WP_002679070.1	glucose-1-phosphate thymidylyltransferase RfbA	98.6	23.7	68.1
MGA_112	LOCUS_01120	sequence1:117693..118514(+)	frameshift		118454	WP_002208596.1	lipopolysaccharide biosynthesis protein RfbH	91.9	56.8	56.3
MGA_113	LOCUS_01130	sequence1:118511..119032(+)	frameshift		118457	WP_002208596.1	lipopolysaccharide biosynthesis protein RfbH	95.4	37.1	54.5
MGA_115	LOCUS_01150	sequence1:121361..122344(+)	partial			WP_065611847.1	glycosyltransferase family 2 protein	65.4	64.7	26.3
MGA_118	LOCUS_01180	sequence1:124274..124666(+)	frameshift		124618	WP_008767822.1	HAD-IIIA family hydrolase	85.4	67.7	66.7
MGA_119	LOCUS_01190	sequence1:125430..125990(+)	frameshift		125308,125398	WP_008767823.1	glycosyltransferase family 4 protein	89.2	42.9	33.9
MGA_121	LOCUS_01210	sequence1:128369..128860(+)	frameshift		128821	WP_011107719.1	glycosyltransferase family 2 protein	87.7	52.2	46.9
MGA_122	LOCUS_01220	sequence1:128884..129210(+)	frameshift		128821	WP_011107719.1	glycosyltransferase family 2 protein	95.4	38.1	50.5
MGA_124	LOCUS_01240	sequence1:130227..131315(+)	frameshift		131264	WP_000084309.1	mannose-1-phosphate guanyltransferase	96.1	72.8	46.3
MGA_125	LOCUS_01250	sequence1:131489..131647(+)	frameshift		131273	WP_011266727.1	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	98.1	10.8	80.4
MGA_130	LOCUS_01300	sequence1:136042..136950(-)	partial			WP_002680730.1	vWA domain-containing protein	63.6	26.5	40.6
MGA_131	LOCUS_01310	sequence1:137090..138229(-)	frameshift		137633,137050,137116	WP_002680730.1	vWA domain-containing protein	60.9	33.5	42.3
MGA_134	LOCUS_01340	sequence1:141963..142502(+)	frameshift		142466	WP_010957271.1	ribulose-phosphate 3-epimerase	89.4	76.6	64.4
MGA_143	LOCUS_01430	sequence1:150101..150763(+)	frameshift		150757	WP_002679883.1	30S ribosomal protein S1	99.5	27.0	65.3
MGA_144	LOCUS_01440	sequence1:150775..151173(+)	frameshift		151035	WP_010889691.1	30S ribosomal protein S1	48.5	11.6	46.9
MGA_145	LOCUS_01450	sequence1:151176..152495(+)	frameshift		151044	WP_002679883.1	30S ribosomal protein S1	99.5	54.1	73.1
MGA_148	LOCUS_01480	sequence1:154923..157199(+)	partial			WP_001291001.1	CHASE2 domain-containing protein	57.5	59.2	40.1
MGA_154	LOCUS_01540	sequence1:161813..162529(+)	frameshift		162496	WP_005786594.1	DNA/RNA non-specific endonuclease	77.3	56.2	24.7
MGA_165	LOCUS_01650	sequence1:170228..171136(+)	frameshift,internal_stop_codon	171017..171019(+)	171124,171013	WP_010956862.1	excinuclease ABC subunit UvrA	79.8	25.3	81.7
MGA_166	LOCUS_01660	sequence1:171168..172832(+)	frameshift,internal_stop_codon	171017..171019(+)	172813,171013,172814,171127	WP_010956862.1	excinuclease ABC subunit UvrA	99.1	57.5	74.3
MGA_167	LOCUS_01670	sequence1:172931..173152(+)	frameshift		172814	WP_010956862.1	excinuclease ABC subunit UvrA	100.0	7.7	76.7
MGA_170	LOCUS_01700	sequence1:177307..178368(+)	frameshift		178233	WP_002678734.1	HDIG domain-containing protein	98.3	45.4	31.2
MGA_171	LOCUS_01710	sequence1:178263..179384(+)	frameshift		179376,178233	WP_002678734.1	HDIG domain-containing protein	98.7	48.0	56.8
MGA_179	LOCUS_01790	sequence1:189743..190954(-)	partial			WP_002678737.1	hypothetical protein	64.3	80.5	39.2
MGA_193	LOCUS_01930	sequence1:203489..203902(+)	frameshift		203827	WP_002225657.1	valine--pyruvate transaminase	86.9	27.2	47.9
MGA_194	LOCUS_01940	sequence1:204225..204788(+)	frameshift		204264	WP_001200164.1	valine--pyruvate transaminase	89.8	38.0	39.9
MGA_205	LOCUS_02050	sequence1:211115..211990(-)	frameshift		211162	WP_003130350.1	ClC family H(+)/Cl(-) exchange transporter	93.1	52.9	36.0
MGA_208	LOCUS_02080	sequence1:215207..216991(-)	partial			WP_011250835.1	alpha-amylase	56.4	68.1	29.4
MGA_215	LOCUS_02150	sequence1:222081..223229(+)	frameshift		223187	WP_002669313.1	replicative DNA helicase	96.9	83.4	59.0
MGA_216	LOCUS_02160	sequence1:223250..223417(+)	frameshift		223187	WP_002669313.1	replicative DNA helicase	100.0	11.7	50.9
MGA_225	LOCUS_02250	sequence1:231666..232091(-)	frameshift		232200,232152	WP_002680262.1	30S ribosomal protein S2	100.0	47.4	63.1
MGA_226	LOCUS_02260	sequence1:232096..232548(-)	frameshift		232203,232158	WP_002680262.1	30S ribosomal protein S2	79.3	40.9	81.5
MGA_229	LOCUS_02290	sequence1:234460..235011(-)	partial			WP_002667723.1	lipoprotein	74.3	67.8	45.7
MGA_233	LOCUS_02330	sequence1:237035..237739(-)	frameshift		237963	WP_002682344.1	HD domain-containing protein	96.6	50.7	53.3
MGA_234	LOCUS_02340	sequence1:237961..238146(-)	frameshift		237962,238118	WP_002682344.1	HD domain-containing protein	85.2	11.6	63.5
MGA_235	LOCUS_02350	sequence1:238071..238388(-)	frameshift		237968,238124	WP_002682344.1	HD domain-containing protein	75.2	17.6	55.7
MGA_238	LOCUS_02380	sequence1:239816..240205(+)	partial			WP_005811520.1	hypothetical protein	62.8	69.8	55.6
MGA_241	LOCUS_02410	sequence1:241838..242611(+)	frameshift		242590	WP_003246419.1	helix-turn-helix domain-containing GNAT family N-acetyltransferase	85.2	70.8	35.7
MGA_242	LOCUS_02420	sequence1:242608..242826(+)	frameshift		242596	WP_003246419.1	helix-turn-helix domain-containing GNAT family N-acetyltransferase	95.8	23.0	44.3
MGA_250	LOCUS_02500	sequence1:250098..250718(+)	frameshift		250658	WP_002671179.1	endolytic transglycosylase MltG	90.8	55.3	38.0
MGA_251	LOCUS_02510	sequence1:250703..251125(+)	frameshift		250658	WP_002671179.1	endolytic transglycosylase MltG	99.3	40.9	66.2
MGA_252	LOCUS_02520	sequence1:251125..251676(+)	frameshift		251655	WP_002678905.1	DNA primase	100.0	30.6	54.6
MGA_253	LOCUS_02530	sequence1:251922..252920(+)	frameshift		251655	WP_002678905.1	DNA primase	98.8	54.6	52.6
MGA_261	LOCUS_02610	sequence1:261487..261864(+)	frameshift		261834	WP_002677908.1	rod shape-determining protein RodA	97.6	28.2	55.7
MGA_262	LOCUS_02620	sequence1:261921..262796(+)	frameshift		261834	WP_002677908.1	rod shape-determining protein RodA	99.3	66.7	59.2
MGA_265	LOCUS_02650	sequence1:266410..266895(-)	partial			WP_010973816.1	ABC transporter permease	95.0	56.9	22.1
MGA_268	LOCUS_02680	sequence1:268171..270651(-)	frameshift		270695	WP_002679160.1	pyruvate, phosphate dikinase	90.8	80.6	71.4
MGA_269	LOCUS_02690	sequence1:270651..271079(-)	frameshift		270701	WP_002679160.1	pyruvate, phosphate dikinase	90.1	13.7	76.6
MGA_273	LOCUS_02730	sequence1:276534..277001(-)	frameshift		277006	WP_002668934.1	signal peptidase I	98.1	65.2	44.4
MGA_287	LOCUS_02870	sequence1:292536..293267(-)	partial			WP_011057313.1	ABC transporter ATP-binding protein	89.7	67.5	46.3
MGA_292	LOCUS_02920	sequence1:298698..299660(-)	frameshift		299761	WP_010956965.1	DUF1926 domain-containing protein	100.0	51.7	44.6
MGA_293	LOCUS_02930	sequence1:299708..300592(-)	partial			WP_011118691.1	DUF1926 domain-containing protein	89.1	36.7	25.7
MGA_297	LOCUS_02970	sequence1:302816..303484(-)	frameshift		303507	WP_002678975.1	RnfABCDGE type electron transport complex subunit D	98.6	63.7	39.3
MGA_303	LOCUS_03030	sequence1:307989..308606(+)	frameshift		308537	WP_002679695.1	hypothetical protein	86.8	60.1	72.1
MGA_304	LOCUS_03040	sequence1:308612..308854(+)	frameshift		308537	WP_002679695.1	hypothetical protein	100.0	26.8	51.2
MGA_306	LOCUS_03060	sequence1:310039..310692(-)	frameshift		310717	WP_002669419.1	polynucleotide adenylyltransferase PcnB	89.9	51.3	41.5
MGA_307	LOCUS_03070	sequence1:310709..311230(-)	frameshift		310717	WP_002669419.1	polynucleotide adenylyltransferase PcnB	100.0	45.5	67.1
MGA_314	LOCUS_03140	sequence1:320768..321880(+)	partial			WP_001278239.1	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	98.6	73.9	34.5
MGA_319	LOCUS_03190	sequence1:326910..328061(+)	frameshift		326865	WP_002679021.1	ABC transporter ATP-binding protein	56.1	52.6	76.9
MGA_323	LOCUS_03230	sequence1:332036..332818(+)	partial			WP_010774225.1	DUF6056 family protein	83.1	35.2	36.5
MGA_325	LOCUS_03250	sequence1:333292..334059(+)	partial			WP_011107732.1	glycosyltransferase	82.7	59.7	42.3
MGA_329	LOCUS_03290	sequence1:336187..337344(+)	partial			WP_011087736.1	glycosyltransferase family 4 protein	56.4	57.0	29.7
MGA_343	LOCUS_03430	sequence1:352429..352956(-)	partial			WP_002682397.1	YicC family protein	97.7	59.4	57.3
MGA_344	LOCUS_03440	sequence1:353291..353728(-)	frameshift		353805	WP_010956876.1	UDP-N-acetylmuramate--L-alanine ligase	95.9	28.5	56.0
MGA_345	LOCUS_03450	sequence1:353728..354345(-)	frameshift		354410,353804	WP_010956876.1	UDP-N-acetylmuramate--L-alanine ligase	86.8	37.1	65.2
MGA_346	LOCUS_03460	sequence1:354378..354737(-)	frameshift		354410	WP_010956876.1	UDP-N-acetylmuramate--L-alanine ligase	91.6	22.7	53.2
MGA_348	LOCUS_03480	sequence1:356833..357099(-)	frameshift		357184,357241	WP_002682393.1	RluA family pseudouridine synthase	89.8	25.2	50.0
MGA_349	LOCUS_03490	sequence1:357194..357742(-)	frameshift		357241,357199	WP_010255239.1	RluA family pseudouridine synthase	85.7	46.7	38.9
MGA_353	LOCUS_03530	sequence1:359849..360751(-)	partial			WP_010956948.1	ComEC/Rec2 family competence protein	97.0	55.3	42.3
MGA_354	LOCUS_03540	sequence1:360760..361398(-)	partial			WP_010956948.1	ComEC/Rec2 family competence protein	75.0	28.6	24.2
MGA_359	LOCUS_03590	sequence1:366185..366724(-)	partial			WP_002682322.1	rod-binding protein	78.8	72.3	52.6
MGA_362	LOCUS_03620	sequence1:368659..370077(-)	partial			WP_011706766.1	diguanylate cyclase	37.7	21.5	40.8
MGA_364	LOCUS_03640	sequence1:371696..372796(-)	partial			WP_011035311.1	ribonuclease H-like domain-containing protein	48.1	35.7	40.0
MGA_365	LOCUS_03650	sequence1:372796..374052(-)	frameshift		374078	WP_003246149.1	ATP-dependent helicase MrfA	97.8	52.5	38.4
MGA_366	LOCUS_03660	sequence1:374037..375143(-)	frameshift		374081	WP_003246149.1	ATP-dependent helicase MrfA	90.2	43.3	51.2
MGA_383	LOCUS_03830	sequence1:389788..390240(+)	frameshift		390225	WP_002681937.1	nucleoside-diphosphate sugar epimerase/dehydratase	92.7	28.1	71.2
MGA_384	LOCUS_03840	sequence1:390423..391301(+)	frameshift		390225	WP_002681937.1	nucleoside-diphosphate sugar epimerase/dehydratase	94.2	53.9	62.5
MGA_401	LOCUS_04010	sequence1:408617..410812(-)	partial			WP_013384677.1	CRISPR-associated helicase/endonuclease Cas3	76.3	73.8	28.0
MGA_409	LOCUS_04090	sequence1:424492..425151(+)	frameshift		425121	WP_002679075.1	histidine--tRNA ligase	97.7	47.8	66.4
MGA_410	LOCUS_04100	sequence1:425199..425798(+)	frameshift		425124	WP_002679075.1	histidine--tRNA ligase	81.9	36.4	58.9
MGA_411	LOCUS_04110	sequence1:426024..427838(+)	partial			WP_011706045.1	PAS domain S-box protein	61.6	27.8	41.4
MGA_417	LOCUS_04170	sequence1:433584..433712(-)	frameshift		433759	WP_010933085.1	dUTP diphosphatase	95.2	26.3	62.5
MGA_418	LOCUS_04180	sequence1:433739..434023(-)	frameshift		433759	WP_002682351.1	dUTP diphosphatase	89.4	58.3	67.9
MGA_425	LOCUS_04250	sequence1:439004..439615(-)	frameshift		439039	WP_002682411.1	tRNA pseudouridine(55) synthase TruB	96.1	56.9	51.7
MGA_428	LOCUS_04280	sequence1:442740..443639(-)	frameshift		443707	WP_002682413.1	transcription termination factor NusA	100.0	60.0	57.7
MGA_429	LOCUS_04290	sequence1:443561..444220(-)	frameshift		443707	WP_002682413.1	transcription termination factor NusA	81.3	35.2	56.2
MGA_443	LOCUS_04430	sequence1:459847..462072(-)	partial			WP_002682422.1	tetratricopeptide repeat protein	66.1	67.9	42.7
MGA_446	LOCUS_04460	sequence1:464232..464468(+)	frameshift		464432	WP_002670690.1	metallophosphoesterase	84.6	29.3	65.2
MGA_447	LOCUS_04470	sequence1:464543..464914(+)	frameshift		464432	WP_002670690.1	metallophosphoesterase	95.1	52.0	46.2
MGA_461	LOCUS_04610	sequence1:479428..479577(-)	frameshift		479690	WP_002668471.1	flagellar assembly protein FliH	89.8	14.3	77.3
MGA_462	LOCUS_04620	sequence1:479673..480362(-)	frameshift		479693	WP_002668471.1	flagellar assembly protein FliH	97.8	73.1	59.9
MGA_473	LOCUS_04730	sequence1:490651..491037(-)	frameshift		491063	WP_002678696.1	tetratricopeptide repeat protein	89.8	47.9	49.6
MGA_479	LOCUS_04790	sequence1:496787..497140(-)	partial			WP_003548990.1	UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase	79.5	21.3	36.1
MGA_480	LOCUS_04800	sequence1:497302..497745(-)	frameshift		497762,497351	WP_002678687.1	UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase	97.3	29.8	54.5
MGA_481	LOCUS_04810	sequence1:497745..498191(-)	frameshift		497762	WP_002678687.1	UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase	93.9	29.2	46.0
MGA_491	LOCUS_04910	sequence1:504565..506343(-)	partial			WP_011862014.1	diguanylate cyclase	35.3	24.9	33.0
MGA_499	LOCUS_04990	sequence1:511668..512471(-)	partial			WP_002679999.1	SAM-dependent methyltransferase	74.9	76.4	54.2
MGA_500	LOCUS_05000	sequence1:512455..512661(-)	partial			WP_002680039.1	RNA pseudouridine synthase	77.9	22.5	54.7
MGA_501	LOCUS_05010	sequence1:512813..513235(-)	frameshift,internal_stop_codon	512813..512815(-)	512791	WP_005792014.1	pseudouridine synthase	84.3	52.0	32.8
MGA_508	LOCUS_05080	sequence1:520854..521861(-)	partial			WP_003973202.1	RNA polymerase sigma factor	86.9	56.4	46.7
MGA_517	LOCUS_05170	sequence1:529376..529915(-)	frameshift		529929,529923	WP_003732280.1	ABC transporter ATP-binding protein	97.8	33.7	54.9
MGA_518	LOCUS_05180	sequence1:529840..530919(-)	frameshift		529932	WP_164920612.1	ABC transporter ATP-binding protein	90.0	64.3	62.2
MGA_520	LOCUS_05200	sequence1:532395..535130(-)	partial			WP_011202277.1	hypothetical protein	73.9	70.5	24.5
MGA_528	LOCUS_05280	sequence1:543232..543552(-)	frameshift		543668	WP_002671244.1	chemotaxis protein CheA	100.0	13.5	82.4
MGA_529	LOCUS_05290	sequence1:543624..545648(-)	frameshift		543668	WP_002671244.1	chemotaxis protein CheA	97.9	81.6	58.1
MGA_532	LOCUS_05320	sequence1:553715..554608(-)	partial			WP_004081767.1	HD-GYP domain-containing protein	60.9	43.0	43.5
MGA_533	LOCUS_05330	sequence1:554816..555241(-)	frameshift		555366	WP_002682403.1	DUF1957 domain-containing protein	93.6	25.1	52.3
MGA_534	LOCUS_05340	sequence1:555238..556404(-)	frameshift		555366	WP_002682403.1	DUF1957 domain-containing protein	86.3	62.9	39.7
MGA_544	LOCUS_05440	sequence1:563727..563963(-)	partial			WP_002670205.1	type II toxin-antitoxin system VapB family antitoxin	61.5	73.8	68.8
MGA_545	LOCUS_05450	sequence1:564376..565977(+)	partial			WP_196793289.1	PAS domain-containing hybrid sensor histidine kinase/response regulator	97.9	65.3	46.0
MGA_546	LOCUS_05460	sequence1:566071..566331(-)	frameshift,internal_stop_codon	566069..566071(-)	566407,566479	WP_010957540.1	DNA-3-methyladenine glycosylase I	100.0	40.6	60.5
MGA_547	LOCUS_05470	sequence1:566432..566641(-)	frameshift		566407,566479	WP_010957540.1	DNA-3-methyladenine glycosylase I	76.8	24.5	64.2
MGA_552	LOCUS_05520	sequence1:569640..570602(-)	partial			WP_010957277.1	M15 family metallopeptidase	80.6	66.9	34.6
MGA_554	LOCUS_05540	sequence1:571670..572767(+)	partial			WP_003082226.1	diguanylate cyclase RoeA	51.2	46.5	39.6
MGA_556	LOCUS_05560	sequence1:573392..573691(-)	partial			WP_002680353.1	hypothetical protein	93.9	64.6	34.0
MGA_560	LOCUS_05600	sequence1:576468..577256(+)	partial			WP_002680489.1	TPM domain-containing protein	66.4	67.2	44.8
MGA_569	LOCUS_05690	sequence1:585302..585466(+)	frameshift		585227	WP_002296409.1	DUF1538 domain-containing protein	96.3	22.9	38.5
MGA_571	LOCUS_05710	sequence1:586194..586544(+)	partial			WP_002295200.1	P-II family nitrogen regulator	84.5	74.2	42.9
MGA_592	LOCUS_05920	sequence1:609963..611087(+)	frameshift		611048,611061	WP_010956742.1	TolC family protein	97.9	79.2	24.7
MGA_594	LOCUS_05940	sequence1:611368..613023(+)	partial			WP_013223543.1	glycosyltransferase family 4 protein	31.8	42.6	27.0
MGA_595	LOCUS_05950	sequence1:613118..613822(-)	partial			WP_010869729.1	TldD/PmbA family protein	86.8	53.1	24.2
MGA_608	LOCUS_06080	sequence1:621073..621891(+)	partial			WP_000557907.1	5-methylcytosine-specific endonuclease McrA	25.7	25.3	52.9
MGA_619	LOCUS_06190	sequence1:631522..631962(+)	partial			WP_066874483.1	DinB family protein	89.7	73.5	30.1
MGA_627	LOCUS_06270	sequence1:639513..640829(-)	partial			WP_001211931.1	two-component system sensor histidine kinase ZraS	58.4	58.1	28.3
MGA_631	LOCUS_06310	sequence1:644346..645668(-)	partial			WP_005794794.1	efflux RND transporter periplasmic adaptor subunit	68.0	74.0	34.3
MGA_639	LOCUS_06390	sequence1:653202..653840(+)	partial			WP_003091114.1	TetR/AcrR family transcriptional regulator	75.0	68.4	34.6
MGA_640	LOCUS_06400	sequence1:654196..654915(+)	partial			WP_010964643.1	radical SAM protein	98.7	65.0	45.8
MGA_643	LOCUS_06430	sequence1:658034..659671(-)	frameshift		659667	WP_002679557.1	insulinase family protein	95.4	50.7	34.8
MGA_644	LOCUS_06440	sequence1:659611..661083(-)	frameshift		659676	WP_002679557.1	insulinase family protein	95.3	46.7	54.8
MGA_647	LOCUS_06470	sequence1:663397..664131(-)	partial			WP_010876096.1	PAS domain S-box protein	60.7	25.0	33.6
MGA_651	LOCUS_06510	sequence1:667392..669491(-)	partial			WP_011461023.1	cell wall-binding repeat-containing protein	51.8	41.2	22.7
MGA_663	LOCUS_06630	sequence1:682471..685632(-)	partial			WP_011105092.1	EAL domain-containing protein	50.8	42.4	28.8
MGA_664	LOCUS_06640	sequence1:685914..687425(+)	partial			WP_086850600.1	LuxR C-terminal-related transcriptional regulator	41.0	23.6	24.6
MGA_665	LOCUS_06650	sequence1:687479..688411(+)	partial			WP_011030835.1	LuxR family transcriptional regulator	20.3	7.1	42.9
MGA_672	LOCUS_06720	sequence1:691765..692787(-)	partial			WP_011861347.1	prephenate dehydratase	69.7	59.0	38.4
MGA_675	LOCUS_06750	sequence1:696585..697322(+)	partial			WP_011056829.1	hemolysin family protein	93.1	50.9	38.4
MGA_687	LOCUS_06870	sequence1:707239..709224(-)	partial			WP_012869273.1	V-type ATPase 116kDa subunit family protein	68.7	65.9	26.5
MGA_692	LOCUS_06920	sequence1:711207..711605(-)	partial			WP_002668509.1	preprotein translocase subunit SecG	68.9	78.4	54.9
MGA_701	LOCUS_07010	sequence1:723141..723479(-)	partial			WP_002672297.1	preprotein translocase subunit YajC	69.6	56.9	64.1
MGA_736	LOCUS_07350	sequence1:752035..752457(-)	partial			WP_002682286.1	DNA repair protein RadC	75.7	47.1	51.9
MGA_738	LOCUS_07370	sequence1:753145..754137(+)	partial			WP_000675870.1	tyrosine-type recombinase/integrase	66.7	60.2	30.5
MGA_744	LOCUS_07430	sequence1:758172..759509(-)	partial			WP_209627475.1	ATP-binding protein	91.0	59.0	28.1
MGA_745	LOCUS_07440	sequence1:759497..759916(-)	frameshift,internal_stop_codon	759964..759966(-)	759975	WP_002263383.1	Eco57I restriction-modification methylase domain-containing protein	91.4	27.2	45.7
MGA_746	LOCUS_07450	sequence1:759928..760938(-)	frameshift,internal_stop_codon	759964..759966(-)	759975	WP_002263383.1	Eco57I restriction-modification methylase domain-containing protein	95.2	69.5	40.2
MGA_755	LOCUS_07540	sequence1:766773..767891(+)	partial			WP_002888535.1	McrB family protein	90.1	43.8	30.2
MGA_762	LOCUS_07610	sequence1:773139..773528(+)	frameshift		773516	WP_011460576.1	iron-containing alcohol dehydrogenase	96.1	30.9	62.9
MGA_763	LOCUS_07620	sequence1:773486..774310(+)	frameshift		773516	WP_011460576.1	iron-containing alcohol dehydrogenase	96.4	65.8	68.6
MGA_773	LOCUS_07720	sequence1:780768..781244(-)	partial			WP_053228394.1	MarR family winged helix-turn-helix transcriptional regulator	73.4	78.8	34.5
MGA_778	LOCUS_07770	sequence1:786233..787261(+)	partial			WP_011459501.1	HAMP domain-containing sensor histidine kinase	78.7	54.1	30.9
MGA_782	LOCUS_07810	sequence1:789901..790899(+)	partial			WP_164921514.1	alpha/beta hydrolase	55.4	72.3	27.9
MGA_786	LOCUS_07850	sequence1:792374..792970(+)	partial			WP_002719150.1	transcriptional repressor LexA	69.7	53.1	33.6
MGA_790	LOCUS_07890	sequence1:796566..797897(+)	partial			WP_041272304.1	histidine kinase	52.6	58.1	31.7
MGA_791	LOCUS_07900	sequence1:797899..798717(+)	partial			WP_011459132.1	response regulator	86.4	66.0	29.1
MGA_795	LOCUS_07940	sequence1:801668..802207(-)	frameshift		802359	WP_012255992.1	anion transporter	96.6	42.8	46.8
MGA_796	LOCUS_07950	sequence1:802195..802980(-)	frameshift		802362	WP_012255992.1	anion transporter	75.1	48.5	43.9
MGA_797	LOCUS_07960	sequence1:803369..804091(+)	frameshift		804070	WP_016716307.1	alpha/beta hydrolase	94.2	72.2	40.2
MGA_798	LOCUS_07970	sequence1:804076..804321(+)	frameshift		804070	WP_000723973.1	alpha/beta hydrolase	98.8	25.1	58.8
MGA_804	LOCUS_08030	sequence1:811135..811326(-)	partial			WP_011459055.1	anaerobic ribonucleoside triphosphate reductase	50.8	4.1	78.1
MGA_805	LOCUS_08040	sequence1:811356..813419(-)	frameshift		813574	WP_011459055.1	anaerobic ribonucleoside triphosphate reductase	96.2	84.5	63.9
MGA_813	LOCUS_08120	sequence1:822387..824792(-)	partial			WP_011015826.1	tetratricopeptide repeat protein	41.1	52.4	35.3
MGA_816	LOCUS_08150	sequence1:827898..828512(+)	frameshift		827850,828507	WP_002680487.1	DUF115 domain-containing protein	97.5	35.1	39.3
MGA_821	LOCUS_08200	sequence1:834337..834804(-)	frameshift		834872	WP_002656600.1	ATP-dependent zinc metalloprotease FtsH	83.9	20.3	46.9
MGA_822	LOCUS_08210	sequence1:834804..836246(-)	frameshift		834872	WP_002656600.1	ATP-dependent zinc metalloprotease FtsH	90.6	67.8	57.7
MGA_830	LOCUS_08290	sequence1:842387..842977(-)	frameshift		842969	WP_002679466.1	nicotinate-nucleotide adenylyltransferase	100.0	48.6	39.7
MGA_831	LOCUS_08300	sequence1:842967..843455(-)	frameshift		843532	WP_003548315.1	nicotinate-nucleotide adenylyltransferase	97.5	68.8	42.1
MGA_839	LOCUS_08380	sequence1:849112..849453(+)	partial			WP_012259466.1	alpha/beta fold hydrolase	95.6	41.5	39.8
MGA_842	LOCUS_08410	sequence1:851389..852126(-)	partial			WP_009967191.1	peptidoglycan editing factor PgeF	66.1	59.0	36.1
MGA_846	LOCUS_08450	sequence1:857432..857902(-)	frameshift		857518	WP_002678446.1	adenine phosphoribosyltransferase	91.0	79.8	59.9
MGA_849	LOCUS_08480	sequence1:859139..860071(-)	frameshift		859141	WP_002680471.1	divergent polysaccharide deacetylase family protein	68.7	53.3	55.8
MGA_850	LOCUS_08490	sequence1:860179..861012(-)	partial			WP_207280530.1	RNA polymerase sigma factor RpoD	94.2	72.5	43.5
MGA_853	LOCUS_08520	sequence1:863766..863972(-)	frameshift		864034	WP_010931718.1	UDP-glucose 4-epimerase GalE	88.2	18.2	63.3
MGA_854	LOCUS_08530	sequence1:864014..864751(-)	frameshift		864034	WP_010931718.1	UDP-glucose 4-epimerase GalE	97.6	72.6	64.4
MGA_859	LOCUS_08580	sequence1:872244..873563(+)	frameshift		873329	WP_002681501.1	RecQ family ATP-dependent DNA helicase	79.3	66.8	58.3
MGA_860	LOCUS_08590	sequence1:873500..873937(+)	frameshift		873332	WP_002681501.1	RecQ family ATP-dependent DNA helicase	81.4	19.8	35.2
MGA_865	LOCUS_08640	sequence1:876731..877633(-)	frameshift		876864,877665	WP_015945405.1	putative DNA binding domain-containing protein	87.7	61.0	28.0
MGA_869	LOCUS_08680	sequence1:880908..881948(+)	frameshift		880704	WP_011817022.1	cell envelope integrity protein CreD	92.2	67.2	31.8
MGA_870	LOCUS_08690	sequence1:882167..882997(+)	partial			WP_002680398.1	AmmeMemoRadiSam system protein A	97.1	53.8	42.9
MGA_871	LOCUS_08700	sequence1:883016..883528(+)	internal_stop_codon	882995..882997(+)		WP_011393778.1	AmmeMemoRadiSam system protein A	92.9	34.9	62.1
MGA_873	LOCUS_08720	sequence1:884658..885284(-)	frameshift		884624,884681	WP_011109283.1	formamidopyrimidine-DNA glycosylase	97.1	73.8	41.3
MGA_880	LOCUS_08790	sequence1:890121..890453(+)	frameshift		890442,890085	WP_010956725.1	UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase	99.1	22.9	69.7
MGA_881	LOCUS_08800	sequence1:890504..891409(+)	frameshift		890447	WP_010956725.1	UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase	99.0	64.3	51.3
MGA_887	LOCUS_08860	sequence1:898246..899790(-)	frameshift		899795	WP_009892173.1	carbamoyl-phosphate synthase large subunit	99.4	47.7	56.1
MGA_888	LOCUS_08870	sequence1:899763..899984(-)	frameshift		899795	WP_010870898.1	carbamoyl-phosphate synthase large subunit	91.8	10.0	56.7
MGA_889	LOCUS_08880	sequence1:900130..901485(-)	frameshift		900060,900159	WP_011862003.1	carbamoyl-phosphate synthase large subunit	98.2	41.4	64.1
MGA_890	LOCUS_08890	sequence1:901487..902401(-)	frameshift		902427	WP_001830071.1	carbamoyl phosphate synthase small subunit	99.7	82.5	47.0
MGA_891	LOCUS_08900	sequence1:902398..902568(-)	frameshift		902427	WP_002360175.1	carbamoyl phosphate synthase small subunit	91.1	14.2	62.7
MGA_893	LOCUS_08920	sequence1:903846..904460(-)	frameshift		903863	WP_048060859.1	type II CAAX endopeptidase family protein	99.0	75.1	33.8
MGA_894	LOCUS_08930	sequence1:904727..905170(-)	frameshift		905295	WP_005807771.1	type I glutamate--ammonia ligase	96.6	31.9	47.2
MGA_895	LOCUS_08940	sequence1:905269..905694(-)	frameshift		905732,905294	WP_011392808.1	type I glutamate--ammonia ligase	94.3	30.0	72.2
MGA_896	LOCUS_08950	sequence1:905712..906056(-)	frameshift		905738	WP_011392811.1	type I glutamate--ammonia ligase	91.2	23.5	63.5
MGA_897	LOCUS_08960	sequence1:906728..907927(+)	partial			WP_010957152.1	DEAD/DEAH box helicase	97.7	68.4	73.6
MGA_898	LOCUS_08970	sequence1:907924..908667(+)	partial			WP_010957152.1	DEAD/DEAH box helicase	72.5	32.3	41.6
MGA_900	LOCUS_08990	sequence1:909880..910311(-)	frameshift		910334	WP_009903830.1	homocysteine S-methyltransferase family protein	96.5	17.4	58.7
MGA_901	LOCUS_09000	sequence1:910323..911237(-)	frameshift		911524,910333	WP_011949155.1	homocysteine S-methyltransferase family protein	99.0	36.0	44.9
MGA_902	LOCUS_09010	sequence1:911234..912373(-)	frameshift		911524	WP_011949155.1	homocysteine S-methyltransferase family protein	71.8	33.0	42.3
MGA_905	LOCUS_09040	sequence1:915153..915818(-)	frameshift		915898	WP_012048324.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	99.5	36.2	54.1
MGA_906	LOCUS_09050	sequence1:915863..916981(-)	frameshift		915883	WP_010963484.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	97.8	59.7	55.3
MGA_907	LOCUS_09060	sequence1:917461..918039(+)	partial			WP_003393623.1	TetR/AcrR family transcriptional regulator	56.2	52.7	35.7
MGA_918	LOCUS_09170	sequence1:928002..928286(+)	frameshift		927957	WP_002680203.1	IspD/TarI family cytidylyltransferase	96.8	37.4	52.7
MGA_919	LOCUS_09180	sequence1:928283..928507(+)	frameshift		928450,928435	WP_002680204.1	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	74.3	34.2	76.4
MGA_920	LOCUS_09190	sequence1:928461..928757(+)	frameshift		928450,928435	WP_002680204.1	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	95.9	58.4	52.1
MGA_921	LOCUS_09200	sequence1:928773..931031(-)	partial			WP_002680206.1	hypothetical protein	99.1	70.6	35.9
MGA_922	LOCUS_09210	sequence1:931048..933006(-)	partial			WP_002680206.1	hypothetical protein	96.5	57.9	24.9
MGA_929	LOCUS_09280	sequence1:937627..939543(-)	partial			WP_048065778.1	tetratricopeptide repeat protein	77.6	45.3	21.9
MGA_932	LOCUS_09310	sequence1:945311..945637(-)	frameshift		945325	WP_002679398.1	2-hydroxyacyl-CoA dehydratase	97.2	6.9	64.8
MGA_938	LOCUS_09370	sequence1:950048..951988(+)	frameshift		951901,951910	WP_011071149.1	PAS domain S-box protein	69.0	26.2	32.0
MGA_939	LOCUS_09380	sequence1:951901..952845(+)	frameshift		951901	WP_001256602.1	response regulator	75.8	18.0	29.8
MGA_941	LOCUS_09400	sequence1:953921..956086(+)	partial			WP_011071149.1	PAS domain S-box protein	99.2	42.0	28.8
MGA_942	LOCUS_09410	sequence1:956340..958124(+)	partial			WP_002681580.1	cache domain-containing protein	66.3	55.7	32.8
MGA_943	LOCUS_09420	sequence1:958257..960038(+)	partial			WP_002680161.1	methyl-accepting chemotaxis protein	63.2	55.9	33.2
MGA_946	LOCUS_09450	sequence1:963294..963971(-)	frameshift		964102	WP_010958164.1	IMP dehydrogenase	99.1	46.6	63.2
MGA_947	LOCUS_09460	sequence1:964094..964654(-)	frameshift		964104,964665	WP_012583116.1	IMP dehydrogenase	97.8	37.1	48.6
MGA_948	LOCUS_09470	sequence1:964741..965775(-)	frameshift		965843	WP_002679156.1	lyase family protein	98.8	70.8	70.6
MGA_950	LOCUS_09490	sequence1:966219..967286(+)	frameshift		967244	WP_012048012.1	DUF1538 domain-containing protein	96.1	67.5	40.5
MGA_951	LOCUS_09500	sequence1:967382..967699(+)	frameshift		967247	WP_012048012.1	DUF1538 domain-containing protein	94.3	20.0	46.5
MGA_954	LOCUS_09530	sequence1:969130..969408(-)	frameshift		969440,969134	WP_002680558.1	ribosome biogenesis GTP-binding protein YihA/YsxC	96.7	51.4	54.1
MGA_955	LOCUS_09540	sequence1:969504..970022(-)	frameshift,internal_stop_codon	970139..970141(-)	970162	WP_000168476.1	acetolactate synthase large subunit	97.7	30.6	52.9
MGA_956	LOCUS_09550	sequence1:969968..971215(-)	frameshift		970051	WP_010937667.1	acetolactate synthase large subunit	82.7	59.9	52.0
MGA_958	LOCUS_09570	sequence1:972061..972597(-)	partial			WP_011070553.1	class I SAM-dependent methyltransferase	63.5	40.8	39.7
MGA_962	LOCUS_09610	sequence1:975034..975702(-)	frameshift		975812	WP_164926914.1	sulfate permease	98.2	37.4	34.1
MGA_963	LOCUS_09620	sequence1:975762..976691(-)	frameshift		975815	WP_005797091.1	sulfate permease	94.2	53.1	53.7
MGA_964	LOCUS_09630	sequence1:976855..977505(+)	frameshift		977490	WP_010957315.1	DNA polymerase III subunit alpha	98.1	18.5	67.9
MGA_965	LOCUS_09640	sequence1:977562..980294(+)	frameshift		977496	WP_010957315.1	DNA polymerase III subunit alpha	100.0	79.4	65.8
MGA_967	LOCUS_09660	sequence1:981201..982049(+)	frameshift		981842,982190	WP_002680562.1	ATP-dependent DNA helicase RecG	77.7	32.3	48.9
MGA_968	LOCUS_09670	sequence1:981986..982270(+)	frameshift		982193,981842	WP_002680562.1	ATP-dependent DNA helicase RecG	73.4	10.2	65.2
MGA_969	LOCUS_09680	sequence1:982174..982827(+)	frameshift		982192,982801	WP_002680562.1	ATP-dependent DNA helicase RecG	94.0	30.1	72.2
MGA_970	LOCUS_09690	sequence1:982827..983237(+)	frameshift		982800	WP_002680562.1	ATP-dependent DNA helicase RecG	98.5	19.9	74.8
MGA_971	LOCUS_09700	sequence1:983454..986210(+)	partial			WP_011202277.1	hypothetical protein	60.2	57.2	20.9
MGA_975	LOCUS_09740	sequence1:989525..989905(-)	partial			WP_010880011.1	nitrogen regulator P-II GlnB	57.1	64.3	52.8
MGA_980	LOCUS_09790	sequence1:993021..993491(-)	partial			WP_002679349.1	tetratricopeptide repeat protein	96.2	27.3	39.7
MGA_981	LOCUS_09800	sequence1:993491..994702(-)	frameshift		993799	WP_002679349.1	tetratricopeptide repeat protein	70.5	51.5	31.3
MGA_985	LOCUS_09840	sequence1:998135..998617(-)	partial			WP_010920946.1	DUF1295 domain-containing protein	87.5	37.4	30.3
MGA_986	LOCUS_09850	sequence1:998683..999075(-)	frameshift		998694	WP_013223913.1	DUF1295 domain-containing protein	71.5	36.3	46.3
MGA_990	LOCUS_09890	sequence1:1004317..1004931(-)	frameshift		1005035	WP_002672116.1	cytoplasmic filament protein CfpA	100.0	28.9	62.9
MGA_991	LOCUS_09900	sequence1:1004988..1006382(-)	frameshift		1005038	WP_002672116.1	cytoplasmic filament protein CfpA	96.1	65.4	84.1
MGA_992	LOCUS_09910	sequence1:1006489..1007055(+)	frameshift		1006983	WP_002670133.1	vWA domain-containing protein	70.7	60.5	54.9
MGA_993	LOCUS_09920	sequence1:1007052..1007468(+)	frameshift		1006983	WP_002670133.1	vWA domain-containing protein	29.7	18.6	58.5
MGA_1006	LOCUS_10050	sequence1:1020224..1021975(-)	partial			WP_011250835.1	alpha-amylase	55.7	67.2	26.7
MGA_1008	LOCUS_10070	sequence1:1022847..1026392(-)	partial			WP_004118272.1	glycogen debranching protein GlgX	52.5	77.0	34.5
MGA_1009	LOCUS_10080	sequence1:1026450..1029746(-)	partial			WP_010957266.1	hypothetical protein	20.2	23.9	31.4
MGA_1014	LOCUS_10130	sequence1:1034321..1035358(-)	frameshift		1034460,1035366	WP_002682053.1	MFS transporter	86.4	69.7	57.6
MGA_1015	LOCUS_10140	sequence1:1035358..1035690(-)	frameshift		1035369	WP_002682053.1	MFS transporter	94.5	23.5	71.2
MGA_1028	LOCUS_10270	sequence1:1045416..1045871(+)	frameshift		1045859	WP_011943878.1	extracellular solute-binding protein	70.2	31.8	58.9
MGA_1029	LOCUS_10280	sequence1:1045868..1046494(+)	frameshift		1045862	WP_011943878.1	extracellular solute-binding protein	98.1	60.1	48.0
MGA_1030	LOCUS_10290	sequence1:1046527..1048335(+)	partial			WP_065525186.1	DUF4084 domain-containing protein	76.9	56.9	37.4
MGA_1032	LOCUS_10310	sequence1:1048733..1049641(-)	partial			WP_010957277.1	M15 family metallopeptidase	78.5	60.5	40.9
MGA_1036	LOCUS_10350	sequence1:1053534..1054304(-)	partial			WP_003417254.1	alpha/beta hydrolase	39.8	33.4	35.9
MGA_1037	LOCUS_10360	sequence1:1054674..1055579(+)	partial			WP_002679809.1	septal ring lytic transglycosylase RlpA family protein	45.5	52.5	54.7
MGA_1039	LOCUS_10380	sequence1:1057910..1059253(+)	frameshift		1059229	WP_002669145.1	ABC-F family ATP-binding cassette domain-containing protein	99.1	81.6	79.7
MGA_1040	LOCUS_10390	sequence1:1059247..1059546(+)	frameshift		1059232	WP_002669145.1	ABC-F family ATP-binding cassette domain-containing protein	100.0	17.8	80.8
MGA_1046	LOCUS_10450	sequence1:1065612..1066286(+)	frameshift		1066250	WP_002681503.1	DNA repair protein RecO C-terminal domain-containing protein	89.7	83.3	49.1
MGA_1048	LOCUS_10470	sequence1:1067841..1069067(+)	frameshift		1069058	WP_002680035.1	single-stranded-DNA-specific exonuclease RecJ	99.5	57.2	64.5
MGA_1049	LOCUS_10480	sequence1:1069121..1069966(+)	frameshift		1069064	WP_002680035.1	single-stranded-DNA-specific exonuclease RecJ	98.9	39.2	47.8
MGA_1054	LOCUS_10530	sequence1:1073623..1074102(-)	partial			WP_002680919.1	DUF192 domain-containing protein	74.8	67.8	57.1
MGA_1056	LOCUS_10550	sequence1:1074833..1075744(-)	frameshift		1075743	WP_002673293.1	cyclic nucleotide-binding domain-containing protein	97.0	71.1	65.8
MGA_1057	LOCUS_10560	sequence1:1075711..1076070(-)	frameshift		1075749	WP_002673293.1	cyclic nucleotide-binding domain-containing protein	91.6	26.3	70.6
MGA_1062	LOCUS_10610	sequence1:1080423..1081121(+)	partial			WP_002673255.1	zf-HC2 domain-containing protein	66.8	75.0	28.1
MGA_1064	LOCUS_10630	sequence1:1083235..1083693(+)	frameshift		1083034	WP_002668261.1	UMP kinase	100.0	65.8	73.0
MGA_1065	LOCUS_10640	sequence1:1083720..1084193(-)	partial			WP_002681594.1	glucosaminidase domain-containing protein	91.1	74.9	67.8
MGA_1074	LOCUS_10730	sequence1:1090086..1090412(+)	frameshift		1090352	WP_010922028.1	glutathione peroxidase	86.1	58.5	67.7
MGA_1076	LOCUS_10750	sequence1:1090863..1092887(-)	partial			WP_003113139.1	patatin-like phospholipase PlpD	70.6	66.6	29.7
MGA_1077	LOCUS_10760	sequence1:1093273..1093518(+)	partial			WP_002672276.1	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	74.1	81.1	61.7
MGA_1083	LOCUS_10820	sequence1:1098497..1099696(-)	partial			WP_011073954.1	phosphate ABC transporter permease subunit PstC	60.2	79.1	48.8
MGA_1118	LOCUS_11170	sequence1:1127705..1128616(-)	partial			WP_002678750.1	hypothetical protein	56.4	55.3	33.7
MGA_1125	LOCUS_11240	sequence1:1134432..1135199(-)	partial			WP_005783481.1	phosphatase PAP2 family protein	62.7	72.5	33.9
MGA_1129	LOCUS_11280	sequence1:1137418..1138287(+)	frameshift		1138245	WP_012258194.1	phosphoenolpyruvate carboxykinase (GTP)	93.8	44.2	65.9
MGA_1130	LOCUS_11290	sequence1:1138293..1139231(+)	frameshift		1138254	WP_003973998.1	phosphoenolpyruvate carboxykinase (GTP)	100.0	50.2	57.7
MGA_1137	LOCUS_11360	sequence1:1146914..1147156(+)	partial			WP_007054380.1	acylphosphatase	71.2	58.8	50.9
MGA_1138	LOCUS_11370	sequence1:1147279..1147845(-)	frameshift		1147862	WP_003433949.1	hydroxylamine reductase	99.5	35.3	73.3
MGA_1139	LOCUS_11380	sequence1:1147842..1148825(-)	frameshift		1147865	WP_003433949.1	hydroxylamine reductase	98.2	62.8	64.7
MGA_1144	LOCUS_11430	sequence1:1151408..1152199(-)	partial			WP_011108597.1	PQQ-binding-like beta-propeller repeat protein	73.4	23.8	23.4
MGA_1149	LOCUS_11480	sequence1:1156169..1157854(-)	partial			WP_013008044.1	adenylate/guanylate cyclase domain-containing protein	49.6	37.4	33.1
MGA_1164	LOCUS_11630	sequence1:1175826..1176191(+)	frameshift		1176137	WP_002666704.1	flagellar export chaperone FliS	100.0	82.2	45.1
MGA_1168	LOCUS_11670	sequence1:1179925..1180212(-)	partial			WP_005811001.1	FeoA family protein	73.7	72.9	48.6
MGA_1171	LOCUS_11700	sequence1:1182126..1182764(-)	partial			WP_002680154.1	RNA-directed DNA polymerase	90.1	58.8	41.5
MGA_1173	LOCUS_11720	sequence1:1183007..1185283(-)	partial			WP_016362020.1	choice-of-anchor L domain-containing protein	80.7	23.3	25.8
MGA_1175	LOCUS_11740	sequence1:1186540..1187763(-)	frameshift,internal_stop_codon	1187805..1187807(-)	1187825,1187783	WP_210119029.1	hypothetical protein	75.7	33.4	32.8
MGA_1177	LOCUS_11760	sequence1:1188146..1190200(-)	frameshift		1188289	WP_002679636.1	hypothetical protein	12.7	9.3	44.8
MGA_1179	LOCUS_11780	sequence1:1190583..1192532(-)	frameshift,internal_stop_codon	1190583..1190585(-)	1190548,1190597,1190573,1190603,1190588,1190557	WP_011119870.1	choice-of-anchor Q domain-containing protein	95.4	19.6	23.6
MGA_1181	LOCUS_11800	sequence1:1193967..1195016(-)	frameshift		1195063	WP_226990688.1	leucine-rich repeat protein	85.4	15.8	33.7
MGA_1183	LOCUS_11820	sequence1:1195684..1196583(-)	partial			WP_210119029.1	hypothetical protein	71.2	27.5	31.1
MGA_1189	LOCUS_11880	sequence1:1202880..1204061(-)	frameshift		1204078	WP_010965946.1	glutamine synthetase III	100.0	56.8	53.2
MGA_1190	LOCUS_11890	sequence1:1204076..1204972(-)	frameshift		1204084	WP_005812354.1	glutamine synthetase III	98.0	41.9	69.5
MGA_1191	LOCUS_11900	sequence1:1205238..1206218(-)	partial			WP_000414323.1	glycosyltransferase	68.4	20.1	32.6
MGA_1197	LOCUS_11960	sequence1:1210116..1216067(-)	partial			WP_000761268.1	alpha-amylase	25.2	72.0	43.1
MGA_1198	LOCUS_11970	sequence1:1216385..1216858(+)	partial			WP_002656613.1	DUF3996 domain-containing protein	55.4	56.4	33.0
MGA_1207	LOCUS_12060	sequence1:1225313..1228411(+)	partial			WP_164920602.1	FlgD immunoglobulin-like domain containing protein	98.3	73.9	51.6
MGA_1212	LOCUS_12110	sequence1:1234014..1235264(+)	partial			WP_002673491.1	hypothetical protein	60.8	42.1	37.8
MGA_1213	LOCUS_12120	sequence1:1235410..1235994(-)	frameshift		1236242	WP_002676956.1	acetyl-CoA carboxylase carboxyltransferase subunit alpha	96.9	61.6	71.8
MGA_1215	LOCUS_12140	sequence1:1236344..1236889(-)	frameshift		1236897	WP_002672437.1	acetyl-CoA carboxylase, carboxyltransferase subunit beta	97.2	66.9	71.0
MGA_1216	LOCUS_12150	sequence1:1236886..1237140(-)	frameshift		1236897	WP_002672437.1	acetyl-CoA carboxylase, carboxyltransferase subunit beta	84.5	27.0	54.9
MGA_1217	LOCUS_12160	sequence1:1237137..1237694(-)	frameshift		1237693	WP_002681761.1	acetyl-CoA carboxylase biotin carboxylase subunit	97.8	41.2	61.3
MGA_1218	LOCUS_12170	sequence1:1237658..1237954(-)	frameshift		1237698,1238037	WP_002681761.1	acetyl-CoA carboxylase biotin carboxylase subunit	87.8	19.6	77.9
MGA_1219	LOCUS_12180	sequence1:1237990..1238454(-)	frameshift		1238037	WP_002681761.1	acetyl-CoA carboxylase biotin carboxylase subunit	96.8	34.6	71.1
MGA_1227	LOCUS_12260	sequence1:1244707..1245606(-)	frameshift		1245629	WP_011815292.1	DNA-binding transcriptional regulator CytR	96.3	84.5	33.1
MGA_1229	LOCUS_12280	sequence1:1247116..1247322(+)	frameshift		1247319	WP_013528956.1	ABC transporter ATP-binding protein	97.1	13.1	63.6
MGA_1234	LOCUS_12330	sequence1:1251952..1252707(+)	frameshift		1252704	WP_010989593.1	amino acid ABC transporter substrate-binding protein/permease	100.0	53.1	61.7
MGA_1235	LOCUS_12340	sequence1:1252707..1253372(+)	frameshift		1252704	WP_010963438.1	amino acid ABC transporter substrate-binding protein/permease	90.5	41.9	59.0
MGA_1259	LOCUS_12580	sequence1:1274099..1275811(+)	partial			WP_005490914.1	ATP-binding protein	66.3	62.2	41.3
MGA_1261	LOCUS_12600	sequence1:1277128..1277559(-)	frameshift		1277136	WP_012582925.1	carbohydrate ABC transporter permease	98.6	51.6	39.4
MGA_1262	LOCUS_12610	sequence1:1277684..1279090(-)	partial			WP_002356840.1	sugar ABC transporter permease	45.1	69.0	36.9
MGA_1265	LOCUS_12640	sequence1:1282192..1283211(+)	frameshift		1283205	WP_010964704.1	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	99.7	61.1	55.3
MGA_1266	LOCUS_12650	sequence1:1283232..1283840(+)	frameshift		1283208	WP_010964704.1	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	100.0	37.1	52.5
MGA_1267	LOCUS_12660	sequence1:1284103..1284552(+)	partial			WP_002680874.1	LysM peptidoglycan-binding domain-containing protein	61.1	55.4	35.9
MGA_1275	LOCUS_12740	sequence1:1291008..1291370(-)	partial			WP_011705527.1	acyl-CoA thioesterase	90.8	69.2	33.9
MGA_1276	LOCUS_12750	sequence1:1292145..1292717(+)	partial			WP_005809044.1	Rpn family recombination-promoting nuclease/putative transposase	98.4	61.7	31.9
MGA_1278	LOCUS_12770	sequence1:1293312..1295408(-)	partial			WP_002682092.1	SUMF1/EgtB/PvdO family nonheme iron enzyme	30.2	60.7	34.6
MGA_1279	LOCUS_12780	sequence1:1295419..1297128(-)	partial			WP_011068644.1	bacterial Ig-like domain-containing protein	51.8	23.8	29.3
MGA_1280	LOCUS_12790	sequence1:1297361..1297876(-)	partial			WP_002680094.1	hypothetical protein	75.4	50.9	34.8
MGA_1282	LOCUS_12810	sequence1:1299479..1299964(+)	frameshift		1299389	WP_010938638.1	zinc ABC transporter substrate-binding protein	91.3	44.5	34.7
MGA_1283	LOCUS_12820	sequence1:1300067..1300903(+)	partial			WP_010933759.1	ABC transporter ATP-binding protein	68.0	74.6	44.0
MGA_1285	LOCUS_12840	sequence1:1301905..1304349(+)	partial			WP_011181932.1	DUF4084 domain-containing protein	57.2	53.6	38.8
MGA_1286	LOCUS_12850	sequence1:1304356..1305510(-)	frameshift		1305545,1305517	WP_010942659.1	EAL domain-containing protein	98.7	47.6	35.3
MGA_1287	LOCUS_12860	sequence1:1305513..1306919(-)	partial			WP_011862014.1	diguanylate cyclase	43.6	24.3	27.8
MGA_1297	LOCUS_12960	sequence1:1318827..1320305(-)	partial			WP_011393604.1	cobalamin-dependent protein	44.9	35.1	33.9
MGA_1300	LOCUS_12990	sequence1:1321852..1322049(-)	frameshift		1322186	WP_000927507.1	DUF4349 domain-containing protein	100.0	29.9	49.2
MGA_1302	LOCUS_13010	sequence1:1323185..1324534(-)	partial			WP_000822525.1	HAMP domain-containing sensor histidine kinase	63.9	61.6	31.5
MGA_1312	LOCUS_13110	sequence1:1337919..1340180(-)	partial			WP_004082388.1	glycogen-binding domain-containing protein	14.7	15.4	40.2
MGA_1314	LOCUS_13130	sequence1:1341860..1342333(+)	frameshift		1341782	WP_011390171.1	ABC transporter permease	95.5	67.3	50.0
MGA_1319	LOCUS_13180	sequence1:1346587..1348122(-)	frameshift		1348172	WP_000391771.1	cellulase family glycosylhydrolase	91.4	71.7	37.2
MGA_1321	LOCUS_13200	sequence1:1349520..1349714(-)	frameshift		1349827	WP_002678981.1	P-loop NTPase	96.9	16.3	48.4
MGA_1322	LOCUS_13210	sequence1:1349681..1350262(-)	frameshift		1350353,1350338,1349825	WP_002678981.1	P-loop NTPase	75.1	38.2	57.9
MGA_1323	LOCUS_13220	sequence1:1350273..1350656(-)	frameshift		1350344,1350353	WP_002678981.1	P-loop NTPase	82.7	27.6	68.6
MGA_1332	LOCUS_13310	sequence1:1358409..1359395(+)	frameshift		1359380	WP_010956828.1	hypothetical protein	99.7	55.2	27.8
MGA_1333	LOCUS_13320	sequence1:1359479..1360183(+)	frameshift		1359380	WP_010956828.1	hypothetical protein	96.6	38.7	28.8
MGA_1334	LOCUS_13330	sequence1:1360209..1360970(-)	frameshift		1361062	WP_002680474.1	radical SAM protein	94.9	73.1	53.3
MGA_1336	LOCUS_13350	sequence1:1361591..1362700(-)	partial			WP_010956680.1	sensor domain-containing diguanylate cyclase	72.1	72.0	32.6
MGA_1338	LOCUS_13370	sequence1:1363428..1363868(+)	frameshift		1363799	WP_002678985.1	prolipoprotein diacylglyceryl transferase	87.7	38.8	58.3
MGA_1339	LOCUS_13380	sequence1:1363961..1364425(+)	frameshift		1363799	WP_002678985.1	prolipoprotein diacylglyceryl transferase	95.5	44.1	53.6
MGA_1347	LOCUS_13460	sequence1:1372411..1373052(-)	frameshift		1373057	WP_164922240.1	polyphosphate kinase 1	99.1	26.4	48.3
MGA_1348	LOCUS_13470	sequence1:1373049..1373855(-)	frameshift		1373063	WP_005814149.1	RNA degradosome polyphosphate kinase	96.3	36.2	44.3
MGA_1349	LOCUS_13480	sequence1:1374176..1374556(-)	partial			WP_164922240.1	polyphosphate kinase 1	77.8	12.3	56.1
MGA_1353	LOCUS_13520	sequence1:1379679..1380149(+)	frameshift,internal_stop_codon	1379698..1379700(+)	1379649,1379577,1379793	WP_003113732.1	asparaginase	61.5	29.0	35.1
MGA_1358	LOCUS_13570	sequence1:1385890..1386441(-)	frameshift		1386515	WP_002680482.1	DNA repair protein RadA	94.0	36.8	62.8
MGA_1359	LOCUS_13580	sequence1:1386483..1387238(-)	frameshift		1386518	WP_002680482.1	DNA repair protein RadA	95.2	53.0	66.5
MGA_1363	LOCUS_13620	sequence1:1391829..1392998(-)	partial			WP_164921634.1	alpha/beta hydrolase fold domain-containing protein	65.8	71.4	28.7
MGA_1384	LOCUS_13830	sequence1:1413443..1414294(-)	frameshift		1414398	WP_011268858.1	histidinol-phosphate transaminase	98.2	78.9	45.0
MGA_1392	LOCUS_13910	sequence1:1423082..1425799(-)	partial			WP_002681056.1	DNA translocase FtsK	59.4	62.4	65.2
MGA_1395	LOCUS_13940	sequence1:1428807..1429790(-)	partial			WP_002680169.1	LysM peptidoglycan-binding domain-containing protein	59.9	54.9	40.8
MGA_1398	LOCUS_13970	sequence1:1432067..1432546(-)	frameshift		1432677	WP_002682327.1	Tex family protein	100.0	22.6	49.5
MGA_1399	LOCUS_13980	sequence1:1432645..1434438(-)	frameshift		1432680	WP_002682327.1	Tex family protein	98.2	71.1	72.5
MGA_1401	LOCUS_14000	sequence1:1435536..1437143(-)	partial			WP_004454079.1	putative ABC transporter permease	37.0	69.7	37.9
MGA_1406	LOCUS_14050	sequence1:1441760..1442764(-)	frameshift		1441777	WP_000709916.1	extracellular solute-binding protein	99.7	81.6	30.6
MGA_1407	LOCUS_14060	sequence1:1442842..1445646(-)	partial			WP_001232763.1	LPXTG-anchored pullulanase SpuA	92.8	71.3	34.0
MGA_1411	LOCUS_14100	sequence1:1450386..1456046(-)	partial			WP_011031383.1	carbohydrate binding domain-containing protein	43.2	77.2	36.9
MGA_1416	LOCUS_14150	sequence1:1461420..1462007(+)	partial			WP_011072024.1	efflux RND transporter periplasmic adaptor subunit	78.5	48.6	23.3
MGA_1420	LOCUS_14190	sequence1:1464167..1464955(-)	partial			WP_005788072.1	RluA family pseudouridine synthase	83.2	69.2	39.8
MGA_1426	LOCUS_14250	sequence1:1468813..1470222(+)	frameshift		1470174	WP_002669793.1	Na/Pi cotransporter family protein	99.8	84.5	58.1
MGA_1427	LOCUS_14260	sequence1:1470300..1470473(+)	frameshift		1470177	WP_002669793.1	Na/Pi cotransporter family protein	96.5	10.0	74.5
MGA_1431	LOCUS_14300	sequence1:1473459..1485896(-)	partial			WP_001111655.1	Ig-like domain-containing protein	75.6	59.3	21.5
MGA_1434	LOCUS_14330	sequence1:1488715..1491261(+)	partial			WP_162015902.1	BTAD domain-containing putative transcriptional regulator	40.0	32.1	25.0
MGA_1443	LOCUS_14420	sequence1:1497223..1497600(+)	partial			WP_004454481.1	FMN-binding protein	70.4	65.7	52.3
MGA_1446	LOCUS_14450	sequence1:1499460..1499693(+)	partial			WP_041272757.1	thioredoxin family protein	96.1	63.2	52.7
MGA_1453	LOCUS_14520	sequence1:1506017..1506853(+)	partial			WP_011089704.1	MBL fold metallo-hydrolase	55.4	46.4	37.9
MGA_1465	LOCUS_14640	sequence1:1516790..1517728(-)	partial			WP_027479828.1	GNAT family N-acetyltransferase	47.1	49.0	31.3
MGA_1469	LOCUS_14680	sequence1:1520020..1521420(-)	partial			WP_010956790.1	methyl-accepting chemotaxis protein	92.9	62.2	44.8
MGA_1475	LOCUS_14740	sequence1:1526926..1527672(-)	partial			WP_005095848.1	alpha/beta hydrolase-fold protein	52.8	31.0	31.7
MGA_1476	LOCUS_14750	sequence1:1527902..1528657(-)	partial			WP_011836405.1	nuclease-related domain-containing protein	88.0	71.4	34.3
MGA_1478	LOCUS_14770	sequence1:1529705..1530112(-)	frameshift		1530207	WP_011986312.1	class I SAM-dependent methyltransferase	96.3	64.5	31.6
MGA_1495	LOCUS_14940	sequence1:1542863..1543552(-)	partial			WP_013383507.1	HNH endonuclease	92.6	54.0	29.3
MGA_1497	LOCUS_14960	sequence1:1544847..1545929(-)	partial			WP_002853121.1	DUF262 domain-containing protein	95.8	63.8	27.2
MGA_1498	LOCUS_14970	sequence1:1546100..1546528(-)	partial			WP_002853121.1	DUF262 domain-containing protein	85.2	19.7	40.7
MGA_1502	LOCUS_15010	sequence1:1548012..1548797(-)	frameshift		1548092	WP_014857550.1	cysteine synthase family protein	87.7	67.3	34.3
MGA_1512	LOCUS_15110	sequence1:1554276..1556177(-)	partial			WP_000187233.1	restriction endonuclease subunit S	42.8	54.2	35.0
MGA_1514	LOCUS_15130	sequence1:1557604..1557972(-)	frameshift		1558052	WP_011105653.1	DEAD/DEAH box helicase family protein	99.2	15.0	61.5
MGA_1515	LOCUS_15140	sequence1:1557939..1560002(-)	frameshift		1558052	WP_000819015.1	DEAD/DEAH box helicase family protein	99.0	84.6	55.7
MGA_1521	LOCUS_15200	sequence1:1566203..1566673(-)	frameshift		1566687	WP_011142948.1	three-Cys-motif partner protein TcmP	88.5	35.4	50.0
MGA_1522	LOCUS_15210	sequence1:1566664..1567317(-)	frameshift		1566687	WP_011142948.1	three-Cys-motif partner protein TcmP	94.5	54.1	57.1
MGA_1529	LOCUS_15280	sequence1:1571764..1572312(-)	partial			WP_011962335.1	DUF262 domain-containing protein	75.8	23.5	30.0
MGA_1531	LOCUS_15300	sequence1:1572847..1574001(-)	partial			WP_011964234.1	site-specific integrase	69.8	77.8	43.7
MGA_1537	LOCUS_15360	sequence1:1584026..1586689(+)	frameshift,internal_stop_codon	1586633..1586635(+),1586603..1586605(+)	1586578	WP_002680941.1	UvrD-helicase domain-containing protein	95.2	73.6	39.3
MGA_1538	LOCUS_15370	sequence1:1586974..1587408(+)	partial			WP_002680941.1	UvrD-helicase domain-containing protein	93.8	13.0	34.2
MGA_1540	LOCUS_15390	sequence1:1588598..1589506(-)	frameshift		1589529,1589526	WP_011107664.1	hypothetical protein	62.6	42.4	25.0
MGA_1542	LOCUS_15410	sequence1:1589947..1590552(-)	partial			WP_010880658.1	TetR/AcrR family transcriptional regulator	52.7	59.8	31.8
MGA_1553	LOCUS_15520	sequence1:1599617..1601065(-)	frameshift		1601079	WP_002681013.1	iron ABC transporter permease	97.1	82.3	46.6
MGA_1554	LOCUS_15530	sequence1:1601301..1601900(-)	frameshift		1601920	WP_002681007.1	thiamine ABC transporter substrate-binding protein	98.0	58.0	55.9
MGA_1555	LOCUS_15540	sequence1:1601897..1602313(-)	frameshift		1601920	WP_002681007.1	thiamine ABC transporter substrate-binding protein	87.0	35.4	45.5
MGA_1570	LOCUS_15690	sequence1:1615488..1615820(+)	frameshift		1615754	WP_002669797.1	RlmE family RNA methyltransferase	93.6	53.3	54.7
MGA_1571	LOCUS_15700	sequence1:1615763..1616083(+)	frameshift		1615754	WP_002669797.1	RlmE family RNA methyltransferase	96.2	51.3	67.6
MGA_1575	LOCUS_15740	sequence1:1618736..1619749(-)	frameshift		1619729,1619990	WP_005814145.1	EAL domain-containing protein	97.9	46.0	40.5
MGA_1577	LOCUS_15760	sequence1:1619928..1620506(-)	frameshift		1619737,1619989,1620541	WP_005814145.1	EAL domain-containing protein	93.8	25.2	33.7
MGA_1578	LOCUS_15770	sequence1:1620506..1620856(-)	frameshift		1620541	WP_003733065.1	PTS sugar transporter subunit IIC	69.8	18.9	41.5
MGA_1579	LOCUS_15780	sequence1:1621074..1621418(+)	frameshift		1621359,1621317,1621071	WP_010964225.1	secondary thiamine-phosphate synthase enzyme YjbQ	69.3	59.8	62.0
MGA_1585	LOCUS_15840	sequence1:1625626..1625805(+)	frameshift,internal_stop_codon	1625545..1625547(+)	1625556,1625412,1625604	WP_005814509.1	manganese efflux pump MntP family protein	94.9	29.8	58.9
MGA_1586	LOCUS_15850	sequence1:1625805..1626011(+)	frameshift		1626275,1626149,1625963,1626221,1626206,1626047	WP_002263190.1	HAD family hydrolase	88.2	28.0	56.7
MGA_1587	LOCUS_15860	sequence1:1626607..1626894(-)	frameshift		1626988,1626943	WP_004079975.1	[FeFe] hydrogenase H-cluster radical SAM maturase HydE	77.9	21.3	47.3
MGA_1588	LOCUS_15870	sequence1:1626959..1627489(-)	frameshift		1626984,1627461,1627368,1627401,1627386,1626939	WP_012868900.1	[FeFe] hydrogenase H-cluster radical SAM maturase HydE	90.3	45.7	43.5
MGA_1589	LOCUS_15880	sequence1:1627673..1627927(-)	frameshift		1627970,1627916	WP_010939056.1	[FeFe] hydrogenase H-cluster maturation GTPase HydF	81.0	16.6	64.7
MGA_1590	LOCUS_15890	sequence1:1627965..1628948(-)	frameshift		1627970,1627916	WP_010939056.1	[FeFe] hydrogenase H-cluster maturation GTPase HydF	99.7	77.6	50.0
MGA_1593	LOCUS_15920	sequence1:1631081..1632334(-)	frameshift		1632348	WP_006301633.1	ABC transporter ATP-binding protein	100.0	71.8	60.5
MGA_1594	LOCUS_15930	sequence1:1632292..1632819(-)	frameshift		1632351	WP_006301633.1	ABC transporter ATP-binding protein	89.1	26.9	44.9
MGA_1608	LOCUS_16070	sequence1:1643780..1644778(-)	frameshift,internal_stop_codon	1643840..1643842(-)	1643860	WP_002680936.1	small ribosomal subunit Rsm22 family protein	88.9	68.0	41.1
MGA_1610	LOCUS_16090	sequence1:1645502..1646509(-)	frameshift		1645602,1646565	WP_002680939.1	ribosome biogenesis GTPase Der	93.7	66.0	63.7
MGA_1614	LOCUS_16130	sequence1:1651279..1652229(+)	partial			WP_008765338.1	carboxymuconolactone decarboxylase family protein	98.7	57.8	53.0
MGA_1623	LOCUS_16220	sequence1:1659718..1660095(-)	frameshift		1660094	WP_010941799.1	TIGR00282 family metallophosphoesterase	90.4	43.1	55.8
MGA_1624	LOCUS_16230	sequence1:1660092..1660580(-)	frameshift		1660100	WP_002682276.1	TIGR00282 family metallophosphoesterase	93.8	52.5	43.4
MGA_1627	LOCUS_16260	sequence1:1662597..1665497(+)	partial			WP_011706045.1	PAS domain S-box protein	41.7	30.2	40.0
MGA_1630	LOCUS_16290	sequence1:1667007..1670348(-)	partial			WP_011071149.1	PAS domain S-box protein	47.4	29.5	40.3
MGA_1638	LOCUS_16370	sequence1:1676704..1677438(+)	partial			WP_010971989.1	nuclear transport factor 2 family protein	50.0	76.6	47.5
MGA_1646	LOCUS_16450	sequence1:1683123..1683869(-)	partial			WP_011202953.1	ATP-binding cassette domain-containing protein	97.6	49.8	74.4
MGA_1647	LOCUS_16460	sequence1:1683857..1684750(-)	partial			WP_011107325.1	ATP-binding cassette domain-containing protein	75.4	45.8	69.6
MGA_1650	LOCUS_16490	sequence1:1687245..1687868(+)	partial			WP_053240220.1	hypothetical protein	47.3	69.7	43.4
MGA_1657	LOCUS_16560	sequence1:1693067..1695655(-)	partial			WP_011704393.1	response regulator	61.4	60.2	40.3
MGA_1658	LOCUS_16570	sequence1:1695754..1696815(-)	frameshift		1696835	WP_000388389.1	MATE family efflux transporter	94.1	74.9	29.8
MGA_1659	LOCUS_16580	sequence1:1696812..1697078(-)	frameshift		1696832	WP_003438549.1	MATE family efflux transporter	85.2	16.6	42.7
MGA_1660	LOCUS_16590	sequence1:1697163..1697645(+)	frameshift		1697507	WP_003229881.1	multidrug efflux transcriptional regulator BltR	71.2	41.4	36.8
MGA_1661	LOCUS_16600	sequence1:1697660..1697989(+)	frameshift		1697513	WP_011948583.1	transcriptional regulator	92.7	48.5	30.7
MGA_1670	LOCUS_16690	sequence1:1705477..1705764(-)	partial			WP_012870274.1	restriction endonuclease subunit S	68.4	17.4	72.3
MGA_1671	LOCUS_16700	sequence1:1705758..1706654(-)	frameshift		1705763	WP_002352261.1	restriction endonuclease subunit S	75.8	37.1	44.3
MGA_1679	LOCUS_16780	sequence1:1711684..1711914(+)	frameshift		1711624	WP_002679941.1	type II toxin-antitoxin system VapC family toxin	69.7	39.8	52.8
MGA_1681	LOCUS_16800	sequence1:1713234..1713701(+)	partial			WP_010964041.1	TetR/AcrR family transcriptional regulator	75.5	64.3	31.7
MGA_1689	LOCUS_16880	sequence1:1721322..1723190(+)	partial			WP_002679969.1	methyl-accepting chemotaxis protein	65.9	57.3	31.7
MGA_1690	LOCUS_16890	sequence1:1723289..1723597(-)	partial			WP_012256920.1	isoamylase early set domain-containing protein	83.3	62.8	49.4
MGA_1694	LOCUS_16930	sequence1:1727522..1729393(-)	partial			WP_002681061.1	methyl-accepting chemotaxis protein	66.3	59.3	27.4
MGA_1706	LOCUS_17050	sequence1:1739780..1740652(+)	frameshift		1740646	WP_011120560.1	glutamate synthase large subunit	99.3	19.1	54.3
MGA_1707	LOCUS_17060	sequence1:1740709..1744323(+)	frameshift		1740646	WP_011120560.1	glutamate synthase large subunit	100.0	79.1	57.9
MGA_1709	LOCUS_17080	sequence1:1745811..1746941(-)	partial			WP_011963224.1	NAD(+)/NADH kinase	53.5	65.5	48.3
MGA_1714	LOCUS_17130	sequence1:1752067..1753461(+)	frameshift		1753428	WP_011461050.1	efflux RND transporter permease subunit	97.8	42.9	31.4
MGA_1715	LOCUS_17140	sequence1:1753446..1755152(+)	frameshift		1753434	WP_011393846.1	efflux RND transporter permease subunit	97.0	53.2	33.3
MGA_1741	LOCUS_17400	sequence1:1781542..1783704(-)	frameshift		1783721	WP_009895801.1	EAL domain-containing protein	97.4	70.3	37.0
MGA_1744	LOCUS_17430	sequence1:1786570..1787376(-)	frameshift		1787339	WP_002680717.1	DUF4139 domain-containing protein	95.5	38.8	37.9
MGA_1745	LOCUS_17440	sequence1:1787325..1788641(-)	frameshift		1787339	WP_002680717.1	DUF4139 domain-containing protein	94.5	60.6	37.0
MGA_1749	LOCUS_17480	sequence1:1791215..1791604(+)	frameshift		1791577	WP_002681753.1	MoxR family ATPase	94.6	37.0	54.1
MGA_1750	LOCUS_17490	sequence1:1791604..1793529(+)	frameshift		1791577,1792162	WP_002681753.1	MoxR family ATPase	29.2	58.1	48.1
MGA_1752	LOCUS_17510	sequence1:1797458..1798012(-)	internal_stop_codon	1798025..1798027(-)		WP_016551819.1	IS110 family transposase	85.9	44.3	39.6
MGA_1753	LOCUS_17520	sequence1:1798025..1798567(-)	internal_stop_codon	1798025..1798027(-)		WP_016551819.1	IS110 family transposase	96.7	47.9	43.1
MGA_1760	LOCUS_17590	sequence1:1806910..1810863(-)	frameshift,internal_stop_codon	1810925..1810927(-)	1810936,1810903,1810966,1806927	WP_010956992.1	toxin TcdB middle/N-terminal domain-containing protein	62.2	26.4	24.5
MGA_1761	LOCUS_17600	sequence1:1810925..1812775(-)	frameshift,internal_stop_codon	1810925..1810927(-)	1810903,1810965,1811878,1810935,1811833	WP_010956992.1	toxin TcdB middle/N-terminal domain-containing protein	90.6	16.8	38.7
MGA_1769	LOCUS_17680	sequence1:1820668..1821339(-)	frameshift		1821482	WP_002681135.1	DNA replication and repair protein RecF	97.8	58.9	45.0
MGA_1770	LOCUS_17690	sequence1:1821456..1821761(-)	frameshift		1821491	WP_002681135.1	DNA replication and repair protein RecF	96.0	26.9	52.6
MGA_1772	LOCUS_17710	sequence1:1823162..1823344(-)	frameshift		1823514	WP_002680852.1	chromosomal replication initiator protein DnaA	95.0	12.2	56.1
MGA_1773	LOCUS_17720	sequence1:1823446..1824564(-)	frameshift		1823523	WP_002680852.1	chromosomal replication initiator protein DnaA	94.1	74.8	54.7
MGA_1775	LOCUS_17740	sequence1:1826712..1826930(+)	frameshift		1826906	WP_002681235.1	DNA topoisomerase (ATP-hydrolyzing) subunit A	94.4	8.3	80.9
MGA_1776	LOCUS_17750	sequence1:1827035..1828594(+)	frameshift		1826906,1828589	WP_002681235.1	DNA topoisomerase (ATP-hydrolyzing) subunit A	99.8	63.7	72.6
MGA_1777	LOCUS_17760	sequence1:1828678..1829298(+)	frameshift		1828591	WP_002681235.1	DNA topoisomerase (ATP-hydrolyzing) subunit A	75.2	19.0	73.5
MGA_1786	LOCUS_17850	sequence1:1834764..1835423(-)	partial			WP_011021186.1	type II CAAX endopeptidase family protein	96.8	73.4	36.3
MGA_1800	LOCUS_17990	sequence1:1843170..1843697(-)	frameshift		1843666	WP_011229133.1	CPBP family intramembrane metalloprotease	70.3	48.1	47.6
MGA_1805	LOCUS_18040	sequence1:1846611..1847045(-)	frameshift		1847110	WP_011109294.1	GNAT family N-acetyltransferase	97.2	30.8	50.4
MGA_1813	LOCUS_18120	sequence1:1851305..1851838(-)	internal_stop_codon	1851878..1851880(-)		WP_010964038.1	epoxide hydrolase	96.6	46.5	50.8
MGA_1814	LOCUS_18130	sequence1:1851878..1852441(-)	internal_stop_codon	1851878..1851880(-)		WP_010964038.1	epoxide hydrolase	96.8	47.2	46.7
MGA_1815	LOCUS_18140	sequence1:1852481..1853254(-)	partial			WP_022471380.1	DUF3788 domain-containing protein	33.5	61.0	44.2
MGA_1816	LOCUS_18150	sequence1:1853383..1854162(-)	partial			WP_011962350.1	leucine-rich repeat domain-containing protein	24.3	14.1	53.0
MGA_1834	LOCUS_18330	sequence1:1865995..1866438(-)	partial			WP_011249477.1	alpha/beta hydrolase-fold protein	91.8	28.1	45.9
MGA_1835	LOCUS_18340	sequence1:1866818..1867747(+)	frameshift		1867654,1867679	WP_012257654.1	MFS transporter	82.8	54.0	40.6
MGA_1836	LOCUS_18350	sequence1:1867747..1868160(+)	partial			WP_012257654.1	MFS transporter	81.8	24.4	40.0
MGA_1837	LOCUS_18360	sequence1:1868337..1869005(+)	frameshift		1869000,1868343	WP_009895801.1	EAL domain-containing protein	96.8	21.7	35.6
MGA_1838	LOCUS_18370	sequence1:1869002..1870537(+)	frameshift		1869002	WP_009895801.1	EAL domain-containing protein	99.6	50.9	37.7
MGA_1844	LOCUS_18430	sequence1:1873668..1874006(+)	frameshift		1873650	WP_011109129.1	epoxyqueuosine reductase	94.6	46.9	56.6
MGA_1849	LOCUS_18480	sequence1:1876937..1879108(-)	frameshift		1879080,1877004	WP_011403935.1	efflux RND transporter permease subunit	98.2	67.6	30.8
MGA_1850	LOCUS_18490	sequence1:1879024..1880013(-)	frameshift		1879088,1879095	WP_152945460.1	efflux RND transporter permease subunit	93.6	28.1	31.5
MGA_1851	LOCUS_18500	sequence1:1880000..1880986(-)	partial			WP_005791602.1	efflux RND transporter periplasmic adaptor subunit	77.1	71.9	26.6
MGA_1853	LOCUS_18520	sequence1:1881627..1882418(-)	partial			WP_010867222.1	amidohydrolase family protein	60.1	60.9	30.2
MGA_1854	LOCUS_18530	sequence1:1882556..1883365(-)	frameshift		1882612	WP_002673213.1	membrane protein	83.3	74.7	44.2
MGA_1864	LOCUS_18630	sequence1:1892391..1892921(-)	partial			WP_004082145.1	YaaR family protein	59.1	67.8	34.6
MGA_1875	LOCUS_18740	sequence1:1903290..1903610(-)	partial			WP_011458936.1	ATP-binding protein	97.2	25.2	47.6
MGA_1877	LOCUS_18760	sequence1:1905667..1905969(+)	frameshift		1905927	WP_010957104.1	phenylalanine--tRNA ligase subunit beta	92.0	17.5	61.8
MGA_1878	LOCUS_18770	sequence1:1906005..1907384(+)	frameshift		1905927	WP_010957104.1	phenylalanine--tRNA ligase subunit beta	99.1	77.9	65.7
MGA_1881	LOCUS_18800	sequence1:1909396..1910667(-)	frameshift		1910789	WP_002679058.1	YidC/Oxa1 family membrane protein insertase	87.9	43.0	30.8
MGA_1882	LOCUS_18810	sequence1:1910787..1912058(-)	frameshift		1910792	WP_002679058.1	YidC/Oxa1 family membrane protein insertase	99.1	46.7	37.7
MGA_1883	LOCUS_18820	sequence1:1912334..1912555(-)	frameshift		1912590	WP_011948822.1	ZIP family metal transporter	100.0	26.4	67.1
MGA_1884	LOCUS_18830	sequence1:1912483..1913148(-)	frameshift		1912590	WP_011948822.1	ZIP family metal transporter	82.4	67.3	64.8
MGA_1897	LOCUS_18960	sequence1:1925118..1925432(+)	partial			WP_002680234.1	hypothetical protein	69.2	61.5	50.0
MGA_1911	LOCUS_19100	sequence1:1938554..1941838(-)	partial			WP_001256602.1	response regulator	72.7	59.1	34.0
MGA_1912	LOCUS_19110	sequence1:1942131..1942772(+)	frameshift		1942769	WP_011948544.1	ABC transporter ATP-binding protein	98.1	69.2	42.7
MGA_1924	LOCUS_19230	sequence1:1952809..1953048(+)	partial			WP_027480298.1	arsenate reductase	82.3	55.6	44.6
MGA_1929	LOCUS_19280	sequence1:1964764..1970556(+)	partial			WP_000678902.1	hypothetical protein	7.2	42.3	27.1
MGA_1932	LOCUS_19310	sequence1:1976566..1978719(+)	partial			WP_002681580.1	cache domain-containing protein	69.3	70.0	29.9
MGA_1942	LOCUS_19410	sequence1:1986077..1987879(+)	partial			WP_011706045.1	PAS domain S-box protein	65.5	29.4	44.7
MGA_1944	LOCUS_19430	sequence1:1989445..1989879(-)	frameshift		1989929	WP_002680501.1	endonuclease III	100.0	68.6	63.2
MGA_1945	LOCUS_19440	sequence1:1989921..1990076(-)	frameshift		1989929	WP_002680501.1	endonuclease III	96.1	23.3	63.3
MGA_1968	LOCUS_19670	sequence1:2015105..2015434(-)	frameshift		2015154,2015475	WP_176994177.1	amidohydrolase	82.6	14.7	60.0
MGA_1969	LOCUS_19680	sequence1:2015365..2016852(-)	frameshift		2015475	WP_013095410.1	amidohydrolase	91.9	73.0	66.8
MGA_1971	LOCUS_19700	sequence1:2017880..2019046(+)	frameshift		2018914	WP_000809002.1	bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA	87.6	69.4	34.0
MGA_1972	LOCUS_19710	sequence1:2018938..2019456(+)	frameshift		2018917	WP_004082429.1	bifunctional UDP-sugar hydrolase/5'-nucleotidase	82.0	26.2	38.3
MGA_1976	LOCUS_19750	sequence1:2021036..2021332(-)	frameshift		2021448	WP_002679969.1	methyl-accepting chemotaxis protein	99.0	13.6	49.5
MGA_1977	LOCUS_19760	sequence1:2021446..2023257(-)	frameshift		2021451	WP_002681835.1	methyl-accepting chemotaxis protein	99.8	78.4	35.0
MGA_1978	LOCUS_19770	sequence1:2023602..2025362(+)	partial			WP_012545054.1	HD domain-containing protein	48.1	78.4	33.7
MGA_1979	LOCUS_19780	sequence1:2025418..2026320(+)	partial			WP_037394087.1	AraC family transcriptional regulator	31.3	33.7	42.6
MGA_1990	LOCUS_19890	sequence1:2035685..2036509(-)	frameshift		2035732	WP_027479770.1	ABC transporter permease	99.6	81.1	31.0
MGA_1992	LOCUS_19910	sequence1:2038656..2040242(-)	partial			WP_012583039.1	glycoside hydrolase family 5 protein	55.1	77.7	32.4
MGA_1999	LOCUS_19980	sequence1:2047717..2048097(+)	frameshift		2048136,2047971	WP_003437073.1	YgiQ family radical SAM protein	64.3	12.1	59.3
MGA_2000	LOCUS_19990	sequence1:2048231..2049547(+)	frameshift		2048136,2049282,2047974	WP_011948014.1	YgiQ family radical SAM protein	82.2	54.9	45.8
MGA_2001	LOCUS_20000	sequence1:2049552..2051498(-)	partial			WP_002658100.1	methyl-accepting chemotaxis protein	75.8	68.5	23.4
MGA_2002	LOCUS_20010	sequence1:2052113..2052442(+)	frameshift		2052301	WP_002669747.1	peptidylprolyl isomerase	57.8	34.6	57.1
MGA_2003	LOCUS_20020	sequence1:2052391..2052630(+)	frameshift		2052301	WP_002669747.1	peptidylprolyl isomerase	100.0	48.4	40.9
MGA_2011	LOCUS_20100	sequence1:2058846..2059517(-)	frameshift		2059537	WP_002679079.1	MBL fold metallo-hydrolase	100.0	47.4	73.5
MGA_2012	LOCUS_20110	sequence1:2059535..2060254(-)	frameshift		2059543	WP_002679079.1	MBL fold metallo-hydrolase	100.0	50.9	72.8
MGA_2016	LOCUS_20150	sequence1:2064674..2065486(-)	partial			WP_165447223.1	SDR family oxidoreductase	73.7	73.7	45.0
MGA_2018	LOCUS_20170	sequence1:2066682..2067764(+)	frameshift		2067761,2067758	WP_002680753.1	Ig-like domain-containing protein	100.0	23.1	48.3
MGA_2019	LOCUS_20180	sequence1:2067839..2071804(+)	frameshift		2067761,2067758	WP_002680753.1	Ig-like domain-containing protein	78.0	65.9	46.0
MGA_2020	LOCUS_20190	sequence1:2071906..2073168(+)	partial			WP_164920609.1	hypothetical protein	62.9	12.8	25.5
MGA_2021	LOCUS_20200	sequence1:2073207..2081933(+)	partial			WP_001111655.1	Ig-like domain-containing protein	39.0	22.0	24.0
MGA_2026	LOCUS_20250	sequence1:2084493..2085926(+)	partial			WP_012545054.1	HD domain-containing protein	39.0	51.0	30.3
MGA_2029	LOCUS_20280	sequence1:2089012..2092038(+)	partial			WP_011071149.1	PAS domain S-box protein	80.0	46.5	27.4
MGA_2040	LOCUS_20390	sequence1:2100309..2101241(-)	frameshift		2101240,2101258,2101267,2101261	WP_226990688.1	leucine-rich repeat protein	85.2	16.8	36.7
MGA_2041	LOCUS_20400	sequence1:2101238..2101714(-)	frameshift		2101264,2101258,2101267	WP_157860391.1	leucine-rich repeat protein	79.7	6.3	43.1
MGA_2046	LOCUS_20450	sequence1:2106916..2108592(+)	frameshift		2108478	WP_002681085.1	hypothetical protein	92.1	73.4	33.8
MGA_2047	LOCUS_20460	sequence1:2108559..2108996(+)	frameshift		2108490	WP_002681085.1	hypothetical protein	97.2	21.0	32.9
MGA_2049	LOCUS_20480	sequence1:2109986..2110747(+)	frameshift		2110723,2110804	WP_002681303.1	AI-2E family transporter	96.0	65.1	41.2
MGA_2050	LOCUS_20490	sequence1:2110791..2111132(+)	frameshift		2110726,2110807	WP_002681303.1	AI-2E family transporter	80.5	24.5	49.5
MGA_2062	LOCUS_20610	sequence1:2122819..2123487(+)	partial			WP_003402684.1	HAD-IB family hydrolase	96.4	57.9	31.7
MGA_2065	LOCUS_20640	sequence1:2125289..2126116(-)	frameshift		2126109	WP_009903270.1	low-specificity L-threonine aldolase	97.5	77.3	45.0
MGA_2066	LOCUS_20650	sequence1:2126095..2126328(-)	frameshift		2126112	WP_009903270.1	low-specificity L-threonine aldolase	97.4	21.8	68.0
MGA_2067	LOCUS_20660	sequence1:2126406..2127611(-)	frameshift		2127655	WP_002680258.1	leucine--tRNA ligase	100.0	46.5	68.1
MGA_2068	LOCUS_20670	sequence1:2127512..2128981(-)	frameshift		2127658	WP_002680258.1	leucine--tRNA ligase	89.8	51.4	72.7
MGA_2082	LOCUS_20810	sequence1:2139166..2140098(-)	partial			WP_005811628.1	M23 family metallopeptidase	41.3	23.4	38.3
MGA_2087	LOCUS_20860	sequence1:2144194..2145117(-)	frameshift		2145143	WP_002682404.1	alanine racemase	99.0	81.0	57.5
MGA_2088	LOCUS_20870	sequence1:2145114..2145320(-)	frameshift		2145143	WP_002682404.1	alanine racemase	98.5	17.7	53.7
MGA_2090	LOCUS_20890	sequence1:2146843..2147838(-)	partial			WP_002211654.1	peptidase	81.9	60.7	38.7
MGA_2094	LOCUS_20930	sequence1:2151126..2151419(+)	frameshift		2151374	WP_011393762.1	sodium:solute symporter	80.4	15.5	60.3
MGA_2095	LOCUS_20940	sequence1:2151377..2152594(+)	frameshift		2151374	WP_011393762.1	sodium:solute symporter	95.8	76.8	46.4
MGA_2097	LOCUS_20960	sequence1:2154376..2155107(+)	frameshift		2155041	WP_002679753.1	M3 family oligoendopeptidase	89.7	35.3	40.4
MGA_2098	LOCUS_20970	sequence1:2155113..2156240(+)	frameshift		2155041	WP_002679753.1	M3 family oligoendopeptidase	97.1	59.8	57.7
MGA_2100	LOCUS_20990	sequence1:2156937..2157449(+)	frameshift		2157434	WP_010940001.1	phenylacetate--CoA ligase	89.4	35.0	55.9
MGA_2101	LOCUS_21000	sequence1:2157464..2157862(+)	frameshift		2157434,2157782	WP_012546536.1	phenylacetate--CoA ligase	79.5	24.6	59.4
MGA_2102	LOCUS_21010	sequence1:2157829..2158257(+)	frameshift		2157784	WP_162490120.1	phenylacetate--CoA ligase	97.9	31.8	52.5
MGA_2106	LOCUS_21050	sequence1:2160920..2161342(+)	frameshift		2160911	WP_003548076.1	GyrI-like domain-containing protein	97.9	60.6	45.3
MGA_2108	LOCUS_21070	sequence1:2162385..2163176(+)	partial			WP_010966689.1	methyltransferase domain-containing protein	52.5	70.0	31.1
MGA_2111	LOCUS_21100	sequence1:2164937..2166319(-)	partial			WP_011390203.1	M48 family metallopeptidase	37.8	65.2	33.3
MGA_2112	LOCUS_21110	sequence1:2167094..2167765(+)	partial			WP_011074089.1	sensor domain-containing diguanylate cyclase	90.1	39.0	39.2
MGA_2114	LOCUS_21130	sequence1:2168185..2168577(-)	frameshift		2168678	WP_053995180.1	YafY family protein	96.2	39.5	31.8
MGA_2115	LOCUS_21140	sequence1:2168658..2169152(-)	frameshift		2168681	WP_053995180.1	YafY family protein	89.0	46.9	36.9
MGA_2116	LOCUS_21150	sequence1:2169339..2170502(+)	frameshift,internal_stop_codon	2170500..2170502(+)	2170532	WP_164920774.1	response regulator	40.1	14.8	48.4
MGA_2117	LOCUS_21160	sequence1:2170568..2171200(+)	frameshift		2170499	WP_130435197.1	ATP-binding protein	96.7	28.9	42.0
MGA_2123	LOCUS_21220	sequence1:2177325..2177909(-)	frameshift		2177348	WP_010963644.1	response regulator transcription factor	96.9	81.3	55.3
MGA_2124	LOCUS_21230	sequence1:2177887..2178771(-)	partial			WP_005812190.1	HAMP domain-containing sensor histidine kinase	92.9	57.2	37.7
MGA_2128	LOCUS_21270	sequence1:2181062..2181508(-)	frameshift		2181049,2181106	WP_009932115.1	N-acetyltransferase	83.8	69.2	29.0
MGA_2129	LOCUS_21280	sequence1:2181744..2182469(-)	partial			WP_002679430.1	outer membrane beta-barrel protein	66.4	73.1	28.5
MGA_2133	LOCUS_21320	sequence1:2186454..2188520(+)	partial			WP_010941954.1	methyl-accepting chemotaxis protein	54.7	64.5	51.4
MGA_2143	LOCUS_21420	sequence1:2196105..2196716(+)	frameshift		2196608	WP_010957030.1	long-chain fatty acid--CoA ligase	82.3	26.4	46.7
MGA_2144	LOCUS_21430	sequence1:2196716..2198017(+)	frameshift		2196608	WP_010957030.1	long-chain fatty acid--CoA ligase	99.3	67.1	58.4
MGA_2149	LOCUS_21480	sequence1:2200901..2202166(-)	partial			WP_012258924.1	glycosyl hydrolase	64.4	49.3	27.1
MGA_2153	LOCUS_21520	sequence1:2206354..2207301(-)	frameshift		2207330	WP_002680161.1	methyl-accepting chemotaxis protein	99.7	44.9	53.5
MGA_2154	LOCUS_21530	sequence1:2207298..2208551(-)	frameshift		2207327	WP_011949079.1	methyl-accepting chemotaxis protein	93.5	56.8	27.0
MGA_2158	LOCUS_21570	sequence1:2211119..2211568(-)	frameshift		2211093,2211142	WP_013389681.1	thiamine diphosphokinase	78.5	47.1	39.3
MGA_2159	LOCUS_21580	sequence1:2211570..2212202(-)	partial			WP_002357629.1	alpha/beta hydrolase	98.1	66.3	51.9
MGA_2162	LOCUS_21610	sequence1:2213183..2214640(+)	frameshift		2214445	WP_005814402.1	ABC transporter ATP-binding protein	87.0	73.5	56.3
MGA_2163	LOCUS_21620	sequence1:2214592..2214909(+)	frameshift		2214448	WP_010966684.1	ABC transporter ATP-binding protein	97.1	17.7	69.6
MGA_2164	LOCUS_21630	sequence1:2214906..2215496(+)	frameshift		2215469	WP_011459544.1	ABC transporter ATP-binding protein	83.7	24.9	63.4
MGA_2165	LOCUS_21640	sequence1:2215481..2216833(+)	frameshift		2215472	WP_043943600.1	ABC transporter ATP-binding protein	98.9	70.9	67.2
MGA_2166	LOCUS_21650	sequence1:2217145..2217609(+)	frameshift		2217549	WP_011462186.1	Cof-type HAD-IIB family hydrolase	78.6	43.7	33.1
MGA_2167	LOCUS_21660	sequence1:2217537..2217959(+)	frameshift		2217537	WP_011108784.1	Cof-type HAD-IIB family hydrolase	83.6	42.6	42.7
MGA_2172	LOCUS_21710	sequence1:2221919..2222965(+)	partial			WP_002682242.1	C40 family peptidase	37.4	82.4	60.3
MGA_2184	LOCUS_21830	sequence1:2232202..2233119(-)	frameshift		2233289	WP_005810321.1	carbamoyl-phosphate synthase large subunit	99.0	28.3	53.5
MGA_2185	LOCUS_21840	sequence1:2233119..2235428(-)	frameshift		2233292	WP_005810321.1	carbamoyl-phosphate synthase large subunit	92.6	66.1	72.9
MGA_2195	LOCUS_21940	sequence1:2242946..2243128(-)	partial			WP_004080225.1	PspC domain-containing protein	96.7	45.7	53.4
MGA_2207	LOCUS_22060	sequence1:2254373..2255764(+)	frameshift		2255650	WP_011792370.1	ATP-binding protein	88.6	50.7	29.8
MGA_2208	LOCUS_22070	sequence1:2255731..2256732(+)	frameshift		2255656	WP_012545339.1	ATP-binding protein	94.0	39.0	46.0
MGA_2210	LOCUS_22090	sequence1:2258244..2259128(-)	partial			WP_002673320.1	TrmH family RNA methyltransferase	63.9	68.3	56.9
MGA_2224	LOCUS_22230	sequence1:2273575..2275347(-)	partial			WP_002680161.1	methyl-accepting chemotaxis protein	73.1	61.5	30.9
MGA_2229	LOCUS_22280	sequence1:2278111..2278683(-)	frameshift		2278700	WP_062695943.1	DUF5131 family protein	96.8	75.4	63.0
MGA_2230	LOCUS_22290	sequence1:2279021..2279884(-)	frameshift		2279925	WP_002288160.1	glycoside hydrolase family 13 protein	96.9	47.3	41.6
MGA_2231	LOCUS_22300	sequence1:2279815..2280807(-)	frameshift		2279922	WP_000471779.1	alpha-glycosidase	95.2	51.7	44.3
MGA_2232	LOCUS_22310	sequence1:2281065..2284283(+)	partial			WP_048064995.1	amylo-alpha-1,6-glucosidase	35.4	54.5	34.4
MGA_2233	LOCUS_22320	sequence1:2284286..2285569(+)	frameshift		2284265	WP_011109382.1	type I pullulanase	96.3	57.6	33.0
MGA_2236	LOCUS_22350	sequence1:2288363..2288779(-)	partial			WP_003548564.1	lysophospholipid acyltransferase family protein	89.1	43.3	27.3
MGA_2241	LOCUS_22400	sequence1:2292647..2294893(+)	partial			WP_053799641.1	patatin-like phospholipase family protein	72.3	59.0	30.5
MGA_2245	LOCUS_22440	sequence1:2298886..2299290(+)	frameshift		2299275	WP_010882974.1	4-alpha-glucanotransferase	86.6	22.4	39.0
MGA_2246	LOCUS_22450	sequence1:2299287..2300912(+)	frameshift		2299269	WP_011203461.1	4-alpha-glucanotransferase	96.3	56.7	31.2
MGA_2250	LOCUS_22490	sequence1:2306320..2307285(-)	partial			WP_000491142.1	L-lysine exporter LysO	67.6	68.6	41.3
MGA_2256	LOCUS_22550	sequence1:2312306..2312836(-)	partial			WP_044971495.1	putative glycoside hydrolase	86.4	22.0	77.6
MGA_2257	LOCUS_22560	sequence1:2313085..2314422(-)	frameshift		2313123	WP_044971495.1	putative glycoside hydrolase	98.4	63.7	39.7
MGA_2261	LOCUS_22600	sequence1:2317406..2317882(-)	frameshift		2317507	WP_010881430.1	shikimate kinase	74.1	67.9	37.6
MGA_2263	LOCUS_22620	sequence1:2318734..2319909(+)	frameshift		2319885	WP_011392714.1	ASKHA domain-containing protein	69.6	42.2	38.9
MGA_2273	LOCUS_22720	sequence1:2327622..2328416(-)	frameshift		2328460	WP_002679216.1	type II and III secretion system protein	98.5	64.2	50.0
MGA_2282	LOCUS_22810	sequence1:2335566..2337530(+)	partial			WP_002679215.1	hypothetical protein	33.0	81.0	29.6
MGA_2285	LOCUS_22840	sequence1:2339017..2339775(+)	frameshift		2339913,2339697,2339721,2339958	WP_010956992.1	toxin TcdB middle/N-terminal domain-containing protein	71.8	5.3	50.8
MGA_2289	LOCUS_22880	sequence1:2341985..2346739(+)	frameshift		2346649	WP_010956992.1	toxin TcdB middle/N-terminal domain-containing protein	78.2	37.3	30.3
MGA_2290	LOCUS_22890	sequence1:2346736..2347248(+)	frameshift		2347180,2346652	WP_010957129.1	RHS repeat-associated core domain-containing protein	87.1	9.6	44.6
MGA_2291	LOCUS_22900	sequence1:2347194..2349596(+)	frameshift		2347176	WP_010956993.1	RHS repeat-associated core domain-containing protein	75.5	53.5	48.2
MGA_2293	LOCUS_22920	sequence1:2351651..2352073(-)	partial			WP_011108259.1	DinB family protein	80.0	73.7	37.9
MGA_2300	LOCUS_22990	sequence1:2356900..2357700(-)	partial			WP_005454927.1	MlaE family lipid ABC transporter permease subunit	59.8	44.3	35.2
MGA_2304	LOCUS_23030	sequence1:2359400..2360416(-)	partial			WP_002679810.1	omptin family outer membrane protease	60.1	62.3	32.5
MGA_2326	LOCUS_23250	sequence1:2383580..2383936(-)	frameshift		2384043	WP_002682259.1	ABC transporter permease	81.4	27.1	49.0
MGA_2327	LOCUS_23260	sequence1:2384041..2384616(-)	frameshift		2384043	WP_002682259.1	ABC transporter permease	99.0	52.5	41.8
MGA_2337	LOCUS_23360	sequence1:2392269..2392607(-)	partial			WP_003119751.1	GspG family T2SS major pseudopilin variant XcpT	94.6	70.9	50.9
MGA_2339	LOCUS_23380	sequence1:2393980..2395476(-)	partial			WP_012583238.1	type II secretion system ATPase GspE	92.0	54.0	42.6
MGA_2340	LOCUS_23390	sequence1:2395476..2396210(-)	frameshift		2396365	WP_002679216.1	type II and III secretion system protein	99.6	60.0	46.5
MGA_2345	LOCUS_23440	sequence1:2407529..2418265(+)	partial			WP_014467599.1	RHS repeat-associated core domain-containing protein	24.9	53.6	25.2
MGA_2350	LOCUS_23490	sequence1:2420363..2420842(-)	partial			WP_003565104.1	helix-turn-helix transcriptional regulator	41.5	35.7	43.9
MGA_2353	LOCUS_23520	sequence1:2422088..2423926(+)	partial			WP_011228383.1	hypothetical protein	68.8	70.4	27.6
MGA_2354	LOCUS_23530	sequence1:2423964..2424923(+)	partial			WP_002357488.1	tyrosine recombinase XerC	74.9	77.3	32.6
MGA_2355	LOCUS_23540	sequence1:2424920..2425615(+)	frameshift		2425529,2425522	WP_003690783.1	site-specific tyrosine recombinase XerD	83.5	62.9	35.2
MGA_2356	LOCUS_23550	sequence1:2425651..2425908(+)	frameshift		2425540	WP_003644441.1	site-specific tyrosine recombinase XerD	67.1	19.3	59.6
MGA_2358	LOCUS_23570	sequence1:2426174..2426536(+)	frameshift		2426177,2426534	WP_009994756.1	KilA-N domain-containing protein	97.5	42.7	59.8
MGA_2359	LOCUS_23580	sequence1:2426554..2426853(+)	frameshift		2426533	WP_004804477.1	KilA-N domain-containing protein	87.9	32.6	60.9
MGA_2365	LOCUS_23640	sequence1:2429880..2430359(-)	partial			WP_003565104.1	helix-turn-helix transcriptional regulator	41.5	35.7	43.9
MGA_2368	LOCUS_23670	sequence1:2431606..2433390(+)	partial			WP_011228383.1	hypothetical protein	70.9	70.4	27.6
MGA_2369	LOCUS_23680	sequence1:2433483..2434442(+)	partial			WP_002357488.1	tyrosine recombinase XerC	74.9	77.3	32.6
MGA_2370	LOCUS_23690	sequence1:2434439..2435428(+)	partial			WP_007324269.1	tyrosine recombinase XerC	69.6	76.0	38.6
MGA_2381	LOCUS_23800	sequence1:2441252..2441911(+)	partial			WP_029409206.1	RHS repeat-associated core domain-containing protein	34.7	28.4	37.5
MGA_2383	LOCUS_23820	sequence1:2442887..2443909(+)	partial			WP_169337322.1	IPT/TIG domain-containing protein	80.0	6.5	29.2
MGA_2405	LOCUS_24040	sequence1:2462535..2462855(+)	frameshift		2462502	WP_012546499.1	PIN domain nuclease	96.2	75.0	29.4
MGA_2406	LOCUS_24050	sequence1:2462946..2463554(-)	frameshift		2463670	WP_011861711.1	amidohydrolase family protein	99.0	37.8	56.9
MGA_2407	LOCUS_24060	sequence1:2463587..2464612(-)	frameshift		2463670	WP_011861711.1	amidohydrolase family protein	84.8	54.1	50.3
MGA_2410	LOCUS_24090	sequence1:2467409..2468317(-)	frameshift		2468328	WP_003435010.1	cardiolipin synthase	95.0	53.2	40.6
MGA_2411	LOCUS_24100	sequence1:2468245..2468922(-)	frameshift		2468349	WP_002457116.1	cardiolipin synthase	81.8	36.8	26.6
MGA_2412	LOCUS_24110	sequence1:2469456..2469884(+)	partial			WP_000483964.1	GNAT family N-acetyltransferase	73.9	58.5	42.5
MGA_2415	LOCUS_24140	sequence1:2472727..2473545(+)	partial			WP_012584100.1	diguanylate cyclase	58.8	15.3	43.9
MGA_2418	LOCUS_24170	sequence1:2476028..2476906(-)	partial			WP_002681061.1	methyl-accepting chemotaxis protein	93.2	43.1	28.0
MGA_2419	LOCUS_24180	sequence1:2476879..2478150(-)	partial			WP_081361214.1	sigma 54-interacting transcriptional regulator	70.9	39.7	32.5
MGA_2423	LOCUS_24220	sequence1:2481094..2481579(+)	frameshift		2480953,2481487	WP_012047942.1	amidophosphoribosyltransferase	82.0	27.4	56.1
MGA_2424	LOCUS_24230	sequence1:2481699..2482400(+)	frameshift		2481489	WP_012047942.1	amidophosphoribosyltransferase	100.0	42.3	57.5
MGA_2425	LOCUS_24240	sequence1:2482485..2483417(+)	frameshift		2483333	WP_012099415.1	phosphoribosylformylglycinamidine cyclo-ligase	91.3	83.7	63.6
MGA_2428	LOCUS_24270	sequence1:2485485..2485787(+)	partial			WP_011181710.1	alpha/beta hydrolase	99.0	39.4	45.5
MGA_2433	LOCUS_24320	sequence1:2489734..2490336(-)	partial			WP_011948983.1	nitroreductase	62.0	81.4	31.3
MGA_2463	LOCUS_24620	sequence1:2516896..2518653(+)	partial			WP_002681580.1	cache domain-containing protein	72.6	60.1	31.2
MGA_2469	LOCUS_24680	sequence1:2523531..2523878(+)	frameshift		2523516	WP_002680882.1	GNAT family N-acetyltransferase	100.0	38.6	40.9
MGA_2471	LOCUS_24700	sequence1:2524877..2525668(-)	partial			WP_010943830.1	glutamate 5-kinase	97.7	68.9	42.0
MGA_2483	LOCUS_24820	sequence1:2539379..2540503(+)	partial			WP_003565337.1	site-specific tyrosine recombinase XerD	62.0	75.1	28.1
MGA_2506	LOCUS_25050	sequence1:2552920..2553258(+)	frameshift		2552890	WP_011204954.1	phage portal protein	46.4	12.1	42.3
MGA_2507	LOCUS_25060	sequence1:2553255..2553857(+)	partial			WP_002296485.1	phage major capsid protein	72.5	30.6	35.4
MGA_2528	LOCUS_25270	sequence1:2569928..2570407(+)	partial			WP_011461399.1	transcriptional regulator	69.2	76.8	41.8
MGA_2535	LOCUS_25340	sequence1:2575282..2575611(-)	frameshift		2575287	WP_005787603.1	DUF2461 domain-containing protein	91.7	45.0	41.0
MGA_2538	LOCUS_25370	sequence1:2578183..2579505(+)	partial			WP_201627701.1	sensor histidine kinase	43.9	33.5	40.6
MGA_2539	LOCUS_25380	sequence1:2579507..2580325(+)	partial			WP_011459132.1	response regulator	84.6	63.8	28.8
MGA_2542	LOCUS_25410	sequence1:2584044..2584907(-)	partial			WP_002674983.1	cytidine deaminase	39.4	83.1	52.2
MGA_2548	LOCUS_25470	sequence1:2589720..2590274(+)	partial			WP_004295290.1	flavodoxin	70.7	72.6	49.2
MGA_2556	LOCUS_25550	sequence1:2598287..2598895(+)	partial			WP_011461388.1	TetR/AcrR family transcriptional regulator	29.7	35.1	41.7
MGA_2565	LOCUS_25640	sequence1:2608160..2608648(+)	frameshift		2608627	WP_002667426.1	class I SAM-dependent methyltransferase	100.0	60.1	65.4
MGA_2566	LOCUS_25650	sequence1:2608645..2608950(+)	frameshift		2608627	WP_002667426.1	class I SAM-dependent methyltransferase	100.0	39.9	81.2
MGA_2568	LOCUS_25670	sequence1:2610234..2611148(-)	partial			WP_011392979.1	HD-GYP domain-containing protein	73.0	67.8	38.7
MGA_2576	LOCUS_25750	sequence1:2617048..2617665(-)	partial			WP_005810368.1	MarR family transcriptional regulator	74.1	74.9	49.3
MGA_2582	LOCUS_25810	sequence1:2622007..2622339(+)	frameshift		2622330	WP_011462102.1	methylated-DNA--[protein]-cysteine S-methyltransferase	100.0	61.5	61.8
MGA_2583	LOCUS_25820	sequence1:2622336..2622545(+)	frameshift		2622330	WP_011462102.1	methylated-DNA--[protein]-cysteine S-methyltransferase	100.0	38.5	69.6
MGA_2590	LOCUS_25890	sequence1:2626496..2627296(+)	partial			WP_002680363.1	50S ribosomal protein L10	63.5	82.4	60.9
MGA_2612	LOCUS_26110	sequence1:2645710..2645976(+)	frameshift		2645970	WP_002670023.1	50S ribosomal protein L6	100.0	49.7	61.8
MGA_2613	LOCUS_26120	sequence1:2646012..2646248(+)	frameshift		2645970	WP_002670023.1	50S ribosomal protein L6	100.0	43.0	66.7
MGA_2620	LOCUS_26190	sequence1:2649918..2650160(+)	partial			WP_002670039.1	30S ribosomal protein S11	100.0	63.5	85.0
MGA_2623	LOCUS_26220	sequence1:2651867..2652073(+)	frameshift		2652037	WP_002682042.1	50S ribosomal protein L17	88.2	33.5	78.3
MGA_2624	LOCUS_26230	sequence1:2652070..2652369(+)	frameshift		2652037	WP_002682042.1	50S ribosomal protein L17	49.5	27.4	77.6
MGA_2628	LOCUS_26270	sequence1:2655048..2655824(+)	frameshift		2655806	WP_011837312.1	branched-chain amino acid ABC transporter permease	88.4	71.0	43.5
MGA_2629	LOCUS_26280	sequence1:2655812..2656048(+)	frameshift		2655806	WP_124797307.1	branched-chain amino acid ABC transporter permease	87.2	19.6	50.0
MGA_2643	LOCUS_26420	sequence1:2670716..2671777(+)	frameshift		2671726	WP_002679937.1	ATP-dependent Clp protease ATP-binding subunit ClpA	96.6	38.1	42.9
MGA_2644	LOCUS_26430	sequence1:2672017..2673255(+)	partial			WP_002679937.1	ATP-dependent Clp protease ATP-binding subunit ClpA	98.1	49.6	56.4
MGA_2647	LOCUS_26460	sequence1:2674868..2675563(-)	frameshift		2674882	WP_015261871.1	HAMP domain-containing sensor histidine kinase	79.7	36.4	28.3
MGA_2658	LOCUS_26570	sequence1:2692666..2693220(+)	frameshift		2693124	WP_002657469.1	TrkH family potassium uptake protein	93.5	39.3	36.4
MGA_2659	LOCUS_26580	sequence1:2693214..2693990(+)	frameshift		2693133	WP_029645128.1	TrkH family potassium uptake protein	100.0	56.6	40.7
MGA_2661	LOCUS_26600	sequence1:2694814..2695014(-)	frameshift		2695046	WP_012259705.1	4-alpha-glucanotransferase	93.9	12.0	51.6
MGA_2662	LOCUS_26610	sequence1:2695029..2696369(-)	frameshift		2695067	WP_002680318.1	4-alpha-glucanotransferase	96.9	83.1	55.5
MGA_2667	LOCUS_26660	sequence1:2702154..2702597(-)	partial			WP_011038217.1	dephospho-CoA kinase	66.7	44.9	36.7
MGA_2680	LOCUS_26790	sequence1:2720288..2722093(+)	partial			WP_002681534.1	tetratricopeptide repeat protein	86.2	52.4	36.8
MGA_2681	LOCUS_26800	sequence1:2722348..2723058(+)	partial			WP_002681534.1	tetratricopeptide repeat protein	78.0	19.3	32.0
MGA_2692	LOCUS_26910	sequence1:2736426..2736551(+)	frameshift		2736336	WP_002680032.1	AMP-binding protein	73.2	5.4	80.0
MGA_2701	LOCUS_27000	sequence1:2746154..2747161(-)	frameshift		2747184	WP_011020839.1	radical SAM protein	48.1	52.8	37.8
MGA_2713	LOCUS_27120	sequence1:2757679..2758908(-)	frameshift		2758943	WP_002678848.1	DUF115 domain-containing protein	78.5	56.9	42.4
MGA_2715	LOCUS_27140	sequence1:2759186..2759524(-)	frameshift		2759188,2758942	WP_002678848.1	DUF115 domain-containing protein	89.3	18.7	33.9
MGA_2717	LOCUS_27160	sequence1:2761361..2761792(-)	frameshift		2761743	WP_010956947.1	signal peptidase I	94.4	83.7	41.6
MGA_2740	LOCUS_27390	sequence1:2786189..2786797(-)	partial			WP_011403305.1	biotin--[acetyl-CoA-carboxylase] ligase	66.3	53.6	41.0
MGA_2743	LOCUS_27420	sequence1:2789143..2789976(+)	partial			WP_000488898.1	methyl-accepting chemotaxis protein	85.9	24.7	25.0
MGA_2745	LOCUS_27440	sequence1:2791590..2792012(-)	partial			WP_002676352.1	Trk system potassium transporter TrkA	98.6	29.6	50.0
MGA_2746	LOCUS_27450	sequence1:2792147..2793040(-)	frameshift		2792308	WP_002676352.1	Trk system potassium transporter TrkA	83.8	49.8	45.8
MGA_2747	LOCUS_27460	sequence1:2793334..2794962(+)	partial			WP_002678969.1	methyl-accepting chemotaxis protein	54.8	49.1	27.1
MGA_2756	LOCUS_27550	sequence1:2803385..2803606(+)	frameshift		2803588	WP_002681223.1	elongation factor G	98.6	10.5	87.5
MGA_2757	LOCUS_27560	sequence1:2803702..2804373(+)	frameshift		2804098,2803588	WP_002681223.1	elongation factor G	91.5	29.9	50.0
MGA_2758	LOCUS_27570	sequence1:2804355..2805416(+)	frameshift		2804097	WP_002681223.1	elongation factor G	99.2	52.6	68.5
MGA_2762	LOCUS_27610	sequence1:2809327..2810085(+)	partial			WP_003130101.1	ROK family protein	49.2	37.5	29.8
MGA_2773	LOCUS_27720	sequence1:2822640..2823458(-)	frameshift		2822654	WP_002679456.1	M23 family metallopeptidase	93.0	81.2	48.2
MGA_2776	LOCUS_27750	sequence1:2824905..2825726(-)	frameshift		2824943	WP_002680161.1	methyl-accepting chemotaxis protein	85.3	33.3	32.2
MGA_2778	LOCUS_27770	sequence1:2828151..2828606(-)	frameshift		2828171	WP_002669773.1	hypothetical protein	98.7	80.5	61.7
MGA_2786	LOCUS_27850	sequence1:2834809..2835600(+)	frameshift		2834797	WP_002675036.1	hypothetical protein	99.6	67.9	36.2
MGA_2789	LOCUS_27880	sequence1:2838715..2839596(+)	frameshift		2839506	WP_002679721.1	adenylate/guanylate cyclase domain-containing protein	87.0	41.4	41.1
MGA_2790	LOCUS_27890	sequence1:2839548..2840597(+)	frameshift		2839506	WP_002679721.1	adenylate/guanylate cyclase domain-containing protein	99.1	54.4	74.0
MGA_2792	LOCUS_27910	sequence1:2844939..2847590(+)	partial			WP_012256205.1	right-handed parallel beta-helix repeat-containing protein	30.8	34.2	31.3
MGA_2793	LOCUS_27920	sequence1:2847602..2850964(+)	partial			WP_011119870.1	choice-of-anchor Q domain-containing protein	47.8	17.7	27.4
MGA_2795	LOCUS_27940	sequence1:2852810..2855269(+)	internal_stop_codon	2852750..2852752(+)		WP_015942796.1	InlB B-repeat-containing protein	26.3	13.7	33.3
MGA_2796	LOCUS_27950	sequence1:2856287..2856829(+)	internal_stop_codon	2856827..2856829(+)		WP_016551819.1	IS110 family transposase	96.7	47.9	43.1
MGA_2797	LOCUS_27960	sequence1:2856842..2857396(+)	internal_stop_codon	2856827..2856829(+)		WP_016551819.1	IS110 family transposase	85.9	44.3	39.6
MGA_2799	LOCUS_27980	sequence1:2858746..2859147(+)	partial			WP_032841374.1	DUF2059 domain-containing protein	83.5	37.8	23.4
MGA_2802	LOCUS_28010	sequence1:2861630..2862235(+)	partial			WP_003722596.1	TetR/AcrR family transcriptional regulator	30.3	28.2	45.9
MGA_2812	LOCUS_28110	sequence1:2871775..2872572(-)	partial			WP_005481724.1	ABC transporter permease	61.9	37.2	26.8
MGA_2814	LOCUS_28130	sequence1:2873513..2873899(-)	frameshift		2874072	WP_011261737.1	ABC transporter ATP-binding protein	97.7	55.1	48.8
MGA_2816	LOCUS_28150	sequence1:2874192..2875286(-)	partial			WP_011249303.1	slipin family protein	61.0	82.5	38.7
MGA_2825	LOCUS_28240	sequence1:2882298..2882471(+)	frameshift		2882447	WP_011122081.1	FAD-dependent oxidoreductase	75.4	7.7	58.1
MGA_2826	LOCUS_28250	sequence1:2882534..2882782(+)	frameshift		2882777,2882450	WP_011254451.1	FAD-dependent oxidoreductase	98.8	17.4	42.7
MGA_2827	LOCUS_28260	sequence1:2882794..2883666(+)	frameshift		2882773	WP_011948003.1	CoA-disulfide reductase	99.3	35.0	41.5
MGA_2835	LOCUS_28340	sequence1:2891356..2891910(+)	frameshift		2891889	WP_002679808.1	TatD family hydrolase	95.7	62.3	39.5
MGA_2847	LOCUS_28460	sequence1:2907401..2907712(+)	frameshift		2907263	WP_003971767.1	N-acetyltransferase	64.1	27.3	50.7
MGA_2853	LOCUS_28520	sequence1:2916185..2917045(-)	partial			WP_236615433.1	serine/threonine-protein kinase	97.6	53.7	35.6
MGA_2855	LOCUS_28540	sequence1:2918052..2918396(-)	partial			WP_011057180.1	FHA domain-containing protein	63.2	7.0	41.7
MGA_2859	LOCUS_28580	sequence1:2921657..2923495(+)	partial			WP_002680159.1	formylglycine-generating enzyme family protein	44.9	82.7	34.7
MGA_2874	LOCUS_28730	sequence1:2935030..2935839(-)	partial			WP_014207793.1	class I SAM-dependent methyltransferase	45.4	46.6	33.6
MGA_2892	LOCUS_28910	sequence1:2949448..2950239(-)	frameshift		2949462	WP_004080991.1	FapA family protein	88.2	49.5	32.6
MGA_2895	LOCUS_28940	sequence1:2952928..2953677(-)	frameshift		2953002	WP_002680667.1	M28 family peptidase	89.6	70.2	58.3
MGA_2910	LOCUS_29090	sequence1:2969354..2970571(-)	partial			WP_041272538.1	cell wall-binding repeat-containing protein	39.8	26.7	32.3
MGA_2911	LOCUS_29100	sequence1:2970866..2972860(+)	frameshift		2972785,2973049	WP_002682238.1	CHASE2 domain-containing protein	95.6	67.6	47.8
MGA_2912	LOCUS_29110	sequence1:2972806..2973108(+)	frameshift		2973052,2972788	WP_002682238.1	CHASE2 domain-containing protein	90.0	9.6	67.8
MGA_2913	LOCUS_29120	sequence1:2973111..2973665(+)	frameshift		2973051	WP_002682238.1	CHASE2 domain-containing protein	100.0	19.8	57.8
MGA_2916	LOCUS_29150	sequence1:2975331..2976026(-)	frameshift		2976055	WP_001240801.1	ATP-binding cassette domain-containing protein	99.1	69.4	54.1
MGA_2918	LOCUS_29170	sequence1:2976988..2977770(-)	partial			WP_011203412.1	metallophosphoesterase	96.2	71.4	32.8
MGA_2920	LOCUS_29190	sequence1:2978836..2979219(+)	partial			WP_004574859.1	NUDIX domain-containing protein	51.2	42.9	46.4
MGA_2922	LOCUS_29210	sequence1:2979750..2980214(+)	partial			WP_012582469.1	DUF6062 family protein	70.8	54.8	34.5
MGA_2924	LOCUS_29230	sequence1:2982496..2983152(+)	frameshift		2982490	WP_003817462.1	amino acid ABC transporter substrate-binding protein	97.7	81.0	47.4
MGA_2929	LOCUS_29280	sequence1:2986273..2986569(+)	frameshift		2986566	WP_002670218.1	ribosome maturation factor RimM	93.9	54.2	49.5
MGA_2937	LOCUS_29360	sequence1:2989893..2990558(+)	frameshift		2989710	WP_002667812.1	HD-GYP domain-containing protein	99.5	52.0	60.5
MGA_2945	LOCUS_29440	sequence1:2996341..2997774(+)	partial			WP_002680511.1	methyl-accepting chemotaxis protein	83.2	56.8	35.3
MGA_2949	LOCUS_29480	sequence1:2999276..3000130(+)	frameshift		3000037	WP_011861435.1	N-acetyl-gamma-glutamyl-phosphate reductase	87.7	70.9	45.4
MGA_2950	LOCUS_29490	sequence1:3000145..3000327(+)	frameshift		3000040	WP_010879563.1	N-acetyl-gamma-glutamyl-phosphate reductase	100.0	17.2	63.3
MGA_2954	LOCUS_29530	sequence1:3004126..3004461(+)	partial			WP_005812401.1	DUF4491 family protein	71.2	84.0	55.7
MGA_2955	LOCUS_29540	sequence1:3004580..3006844(+)	partial			WP_011706045.1	PAS domain S-box protein	53.6	30.2	40.5
MGA_2960	LOCUS_29590	sequence1:3010631..3010969(-)	frameshift		3010735	WP_002262804.1	oleate hydratase	69.6	13.4	62.0
MGA_2963	LOCUS_29620	sequence1:3012924..3015473(+)	partial			WP_011202521.1	leucine-rich repeat protein	16.6	27.7	27.8
MGA_2965	LOCUS_29640	sequence1:3016825..3018486(+)	partial			WP_226990688.1	leucine-rich repeat protein	79.2	25.9	37.2
MGA_2966	LOCUS_29650	sequence1:3018881..3019060(-)	frameshift		3019137	WP_002671939.1	elongation factor P	100.0	31.6	86.4
MGA_2967	LOCUS_29660	sequence1:3019105..3019443(-)	frameshift		3019140	WP_002671939.1	elongation factor P	91.1	54.5	80.4
MGA_2971	LOCUS_29700	sequence1:3022702..3023715(+)	partial			WP_012311219.1	glycosyl hydrolase 53 family protein	95.5	55.1	44.2
MGA_2974	LOCUS_29730	sequence1:3026032..3026865(-)	partial			WP_002681054.1	AAA family ATPase	98.6	26.4	50.9
MGA_2975	LOCUS_29740	sequence1:3027204..3029126(-)	frameshift		3027254	WP_002681054.1	AAA family ATPase	96.2	60.1	31.3
MGA_2977	LOCUS_29760	sequence1:3030372..3031742(+)	partial			WP_002682361.1	HAMP domain-containing methyl-accepting chemotaxis protein	89.3	59.0	23.5
MGA_2982	LOCUS_29810	sequence1:3034772..3034951(-)	frameshift		3035007	WP_003439427.1	3-deoxy-7-phosphoheptulonate synthase	96.6	16.9	54.4
MGA_2983	LOCUS_29820	sequence1:3034957..3035796(-)	frameshift		3035007	WP_003439427.1	3-deoxy-7-phosphoheptulonate synthase	94.6	77.2	58.1
MGA_2991	LOCUS_29900	sequence1:3045009..3046928(+)	frameshift		3046916	WP_002678799.1	DNA repair protein RecN	59.0	67.2	49.3
MGA_2992	LOCUS_29910	sequence1:3046951..3047475(+)	frameshift		3046922	WP_002678799.1	DNA repair protein RecN	95.4	29.2	69.3
MGA_3006	LOCUS_30050	sequence1:3066249..3067382(+)	partial			WP_002678890.1	SGNH family hydrolase	59.7	49.0	44.3
MGA_3008	LOCUS_30070	sequence1:3069064..3079767(+)	partial			WP_001111655.1	Ig-like domain-containing protein	84.5	56.5	21.3
MGA_3010	LOCUS_30090	sequence1:3080942..3081439(+)	partial			WP_000269085.1	redoxin domain-containing protein	83.0	74.3	40.8
MGA_3018	LOCUS_30170	sequence1:3088335..3088982(+)	partial			WP_004193798.1	RluA family pseudouridine synthase	96.7	68.4	31.7
MGA_3020	LOCUS_30190	sequence1:3089701..3090642(+)	partial			WP_081252265.1	helix-turn-helix domain-containing protein	30.4	28.3	37.9
MGA_3022	LOCUS_30210	sequence1:3092007..3092936(+)	partial			WP_041272538.1	cell wall-binding repeat-containing protein	48.9	26.3	37.3
MGA_3023	LOCUS_30220	sequence1:3092949..3095951(+)	partial			WP_000052484.1	Ig-like domain-containing protein	87.5	12.6	22.3
MGA_3033	LOCUS_30320	sequence1:3104917..3105150(+)	frameshift		3105141	WP_013096416.1	ABC transporter ATP-binding protein	97.4	20.8	62.7
MGA_3034	LOCUS_30330	sequence1:3105153..3106028(+)	frameshift		3105132	WP_004079960.1	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	97.6	78.2	59.0
MGA_3035	LOCUS_30340	sequence1:3106095..3106697(-)	frameshift		3106752,3106762	WP_002678953.1	ribonuclease catalytic domain-containing protein	100.0	32.1	58.0
MGA_3036	LOCUS_30350	sequence1:3106733..3107965(-)	frameshift		3106768,3106755	WP_002678953.1	ribonuclease catalytic domain-containing protein	96.6	64.0	43.3
MGA_3059	LOCUS_30580	sequence1:3132607..3133068(+)	frameshift		3132936	WP_002667863.1	tRNA pseudouridine(38-40) synthase TruA	66.0	37.7	59.4
MGA_3061	LOCUS_30600	sequence1:3134804..3135370(-)	frameshift		3135432	WP_002680463.1	primosomal protein N'	100.0	29.1	61.5
MGA_3062	LOCUS_30610	sequence1:3135427..3136794(-)	frameshift		3135432	WP_002680463.1	primosomal protein N'	99.6	67.6	57.6
MGA_3067	LOCUS_30660	sequence1:3142418..3143104(-)	frameshift,internal_stop_codon	3143101..3143103(-),3143086..3143088(-)	3143019	WP_011986366.1	DEAD/DEAH box helicase	73.7	39.9	38.1
MGA_3068	LOCUS_30670	sequence1:3143101..3143679(-)	frameshift,internal_stop_codon	3143101..3143103(-),3143086..3143088(-)	3143019	WP_011986366.1	DEAD/DEAH box helicase	97.4	44.2	38.5
MGA_3077	LOCUS_30760	sequence1:3154731..3156044(+)	frameshift		3156008,3156218	WP_003975532.1	lysine--tRNA ligase	91.5	74.1	33.1
MGA_3078	LOCUS_30770	sequence1:3156377..3158401(+)	partial			WP_037397867.1	adenylate/guanylate cyclase domain-containing protein	42.3	34.2	45.6
MGA_3079	LOCUS_30780	sequence1:3159289..3163695(+)	partial			WP_155030721.1	Ig-like domain-containing protein	38.2	16.5	21.3
MGA_3089	LOCUS_30880	sequence1:3173476..3178176(+)	partial			WP_051754043.1	polymorphic toxin-type HINT domain-containing protein	55.4	24.2	26.5
MGA_3090	LOCUS_30890	sequence1:3179220..3181604(+)	frameshift		3181523	WP_038967665.1	diguanylate cyclase	13.6	17.4	47.3
MGA_3091	LOCUS_30900	sequence1:3182102..3182320(+)	partial			WP_190962212.1	efflux RND transporter permease subunit	77.8	5.2	51.8
MGA_3093	LOCUS_30920	sequence1:3182805..3183671(+)	partial			WP_008762063.1	TolC family protein	98.6	64.1	25.3
MGA_3107	LOCUS_31060	sequence1:3196525..3198219(-)	frameshift		3196626	WP_002679139.1	flagellar filament capping protein FliD	95.6	82.5	45.5
MGA_3123	LOCUS_31220	sequence1:3215449..3215892(-)	frameshift		3216038	WP_002371274.1	ABC transporter permease	81.0	40.0	55.5
MGA_3124	LOCUS_31230	sequence1:3215991..3216404(-)	frameshift,internal_stop_codon	3216032..3216034(-)	3216041,3215998	WP_002289390.1	ABC transporter permease	94.2	43.9	50.0
MGA_3128	LOCUS_31270	sequence1:3218999..3220423(-)	partial			WP_011250835.1	alpha-amylase	68.6	66.8	28.9
MGA_3130	LOCUS_31290	sequence1:3221196..3221744(-)	partial			WP_002675070.1	anaerobic ribonucleoside-triphosphate reductase	36.8	70.5	58.2
MGA_3133	LOCUS_31320	sequence1:3225229..3225615(-)	frameshift		3225701	WP_002679334.1	ABC transporter ATP-binding protein	96.9	50.0	57.3
MGA_3135	LOCUS_31340	sequence1:3226254..3226517(-)	frameshift		3226265	WP_010940149.1	biotin transporter BioY	88.5	42.3	49.4
MGA_3142	LOCUS_31410	sequence1:3233199..3234200(-)	frameshift		3233228	WP_010956849.1	DNA polymerase IV	98.2	82.3	56.3
MGA_3143	LOCUS_31420	sequence1:3234204..3235862(-)	frameshift		3235879	WP_002682271.1	hypothetical protein	94.6	79.7	27.9
MGA_3145	LOCUS_31440	sequence1:3236568..3236981(+)	frameshift		3236520,3236865	WP_002670701.1	hypothetical protein	84.7	29.8	66.4
MGA_3146	LOCUS_31450	sequence1:3236993..3237511(+)	frameshift		3236864,3237473	WP_002670701.1	hypothetical protein	93.6	41.6	62.3
