# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_49	LOCUS_00490	sequence1:50326..51162(-)	internal_stop_codon	51205..51207(-)		WP_143257291.1	glycoside hydrolase family 2 TIM barrel-domain containing protein	100.0	23.3	86.0
MGA_50	LOCUS_00500	sequence1:51205..53910(-)	internal_stop_codon	51205..51207(-)		WP_143257291.1	glycoside hydrolase family 2 TIM barrel-domain containing protein	100.0	75.5	91.8
MGA_167	LOCUS_01670	sequence1:188942..189976(-)	frameshift		190176	WP_164996215.1	RNA-directed DNA polymerase	88.4	67.9	56.1
MGA_174	LOCUS_01740	sequence1:199427..199621(-)	internal_stop_codon	199631..199633(-)		WP_013547326.1	site-specific integrase	93.8	15.0	86.7
MGA_175	LOCUS_01750	sequence1:199631..200629(-)	internal_stop_codon	199631..199633(-)		WP_013548084.1	site-specific integrase	100.0	83.0	75.0
MGA_188	LOCUS_01880	sequence1:220033..220896(+)	partial			WP_102408502.1	site-specific integrase	89.2	63.1	94.9
MGA_198	LOCUS_01980	sequence1:227747..227983(+)	partial			WP_011107746.1	type 1 glutamine amidotransferase family protein	92.3	36.5	56.9
MGA_294	LOCUS_02940	sequence1:361794..363215(-)	frameshift		363340	WP_224207243.1	hypothetical protein	99.8	48.8	81.6
MGA_295	LOCUS_02950	sequence1:363338..364684(-)	frameshift		363340	WP_224207243.1	hypothetical protein	100.0	46.8	71.7
MGA_317	LOCUS_03170	sequence1:391166..391363(+)	internal_stop_codon	391163..391165(+)		WP_004295307.1	helix-turn-helix domain-containing protein	70.8	44.7	65.2
MGA_332	LOCUS_03320	sequence1:407890..408576(-)	partial			WP_029425032.1	site-specific integrase	97.8	71.2	93.3
MGA_425	LOCUS_04250	sequence1:527185..527688(+)	frameshift		527613	WP_165601832.1	hypothetical protein	85.6	38.7	88.3
MGA_426	LOCUS_04260	sequence1:527682..528344(+)	frameshift,internal_stop_codon	528343..528345(+)	527613	WP_165601832.1	hypothetical protein	100.0	58.7	94.5
MGA_437	LOCUS_04370	sequence1:536157..536471(-)	internal_stop_codon	536538..536540(-)		WP_004310171.1	hypothetical protein	95.2	49.7	58.6
MGA_438	LOCUS_04380	sequence1:536538..536717(-)	internal_stop_codon	536538..536540(-)		WP_004310171.1	hypothetical protein	94.9	28.1	73.2
MGA_477	LOCUS_04770	sequence1:591936..592205(-)	frameshift		592265,592325	WP_165034429.1	tyrosine-type recombinase/integrase	70.8	14.1	48.4
MGA_497	LOCUS_04970	sequence1:607845..608513(+)	partial			WP_011108430.1	site-specific integrase	100.0	55.1	100.0
MGA_841	LOCUS_08390	sequence1:1085984..1086223(-)	partial			WP_011202295.1	helix-turn-helix transcriptional regulator	68.4	67.5	61.1
MGA_881	LOCUS_08790	sequence1:1153483..1153860(-)	partial			WP_004298459.1	hypothetical protein	56.8	67.0	78.9
MGA_989	LOCUS_09870	sequence1:1319658..1319984(-)	partial			WP_011108517.1	two-component regulator propeller domain-containing protein	81.5	6.6	68.2
MGA_1040	LOCUS_10380	sequence1:1399805..1400185(+)	internal_stop_codon	1400183..1400185(+)		WP_011108702.1	DUF6443 domain-containing protein	100.0	9.4	93.7
MGA_1041	LOCUS_10390	sequence1:1400246..1400980(+)	internal_stop_codon	1400183..1400185(+)		WP_007757189.1	JAB-like toxin 1 domain-containing protein	99.2	71.8	65.7
MGA_1046	LOCUS_10440	sequence1:1403817..1403978(+)	frameshift,internal_stop_codon	1403976..1403978(+),1404027..1404029(+)	1404062	WP_011108534.1	hypothetical protein	100.0	14.0	71.7
MGA_1128	LOCUS_11260	sequence1:1511395..1512027(-)	partial			WP_011108744.1	DMT family transporter	100.0	72.9	96.7
MGA_1248	LOCUS_12460	sequence1:1694390..1694758(-)	partial			WP_011201924.1	alpha-galactosidase	52.5	8.9	67.2
MGA_1262	LOCUS_12600	sequence1:1718606..1719022(+)	partial			WP_008767622.1	O-antigen ligase family protein	100.0	25.7	96.4
MGA_1267	LOCUS_12650	sequence1:1723155..1723373(-)	partial			WP_010536539.1	tyrosine-type DNA invertase cluster 3b	56.9	13.0	78.0
MGA_1311	LOCUS_13090	sequence1:1781939..1782463(-)	partial			WP_011108848.1	glutaminase family protein	100.0	20.7	99.4
MGA_1366	LOCUS_13640	sequence1:1872644..1873597(-)	partial			WP_008767165.1	O-antigen ligase family protein	100.0	59.0	98.4
MGA_1373	LOCUS_13710	sequence1:1880355..1880702(+)	internal_stop_codon	1880700..1880702(+)		WP_011202019.1	hypothetical protein	96.5	15.9	40.5
MGA_1374	LOCUS_13720	sequence1:1880712..1882280(+)	internal_stop_codon	1880700..1880702(+)		WP_032555800.1	transglutaminase domain-containing protein	99.8	78.7	45.9
MGA_1376	LOCUS_13740	sequence1:1884535..1885077(+)	partial			WP_008767151.1	O-antigen ligase family protein	100.0	34.0	100.0
MGA_1388	LOCUS_13860	sequence1:1901950..1902288(-)	partial			WP_011108882.1	transposase	100.0	24.8	100.0
MGA_1648	LOCUS_16460	sequence1:2276412..2276804(-)	partial			WP_008766919.1	hypothetical protein	100.0	73.9	96.2
MGA_1704	LOCUS_17020	sequence1:2354414..2354995(+)	partial			WP_055271316.1	DUF5686 and carboxypeptidase regulatory-like domain-containing protein	86.0	19.1	94.0
MGA_1705	LOCUS_17030	sequence1:2354922..2356094(+)	partial			WP_055271316.1	DUF5686 and carboxypeptidase regulatory-like domain-containing protein	100.0	44.9	86.9
MGA_1792	LOCUS_17900	sequence1:2472995..2473378(-)	partial			WP_011109047.1	hypothetical protein	100.0	53.4	100.0
MGA_1846	LOCUS_18430	sequence1:2542245..2542460(+)	partial			WP_011109072.1	tyrosine-type recombinase/integrase	100.0	60.2	100.0
MGA_1965	LOCUS_19620	sequence1:2740227..2740892(+)	partial			WP_011109128.1	GyrI-like domain-containing protein	100.0	58.9	99.5
MGA_1971	LOCUS_19680	sequence1:2748170..2749690(-)	partial			WP_002303183.1	glycosyl hydrolase family 28 protein	72.3	83.0	35.8
MGA_2021	LOCUS_20180	sequence1:2837253..2838752(+)	partial			WP_008764411.1	M56 family metallopeptidase	100.0	70.3	99.8
MGA_2053	LOCUS_20500	sequence1:2874371..2874520(+)	partial			WP_008766756.1	type II toxin-antitoxin system RelE/ParE family toxin	95.9	42.7	70.2
MGA_2433	LOCUS_24300	sequence1:3345449..3345676(+)	partial			WP_011109344.1	helix-turn-helix domain-containing protein	100.0	41.4	100.0
MGA_2437	LOCUS_24340	sequence1:3348147..3349952(+)	partial			WP_008769774.1	DUF3987 domain-containing protein	78.9	59.4	28.5
MGA_2443	LOCUS_24400	sequence1:3354199..3354996(+)	partial			WP_011109348.1	Eco57I restriction-modification methylase domain-containing protein	100.0	26.7	98.5
MGA_2565	LOCUS_25620	sequence1:3537279..3537458(-)	internal_stop_codon	3537279..3537281(-)		WP_004291462.1	N-6 DNA methylase	94.9	3.0	51.7
MGA_2575	LOCUS_25720	sequence1:3548728..3548976(-)	internal_stop_codon	3548986..3548988(-)		WP_007216065.1	conjugal transfer protein MobA	97.6	55.2	52.5
MGA_2589	LOCUS_25860	sequence1:3557400..3557813(+)	internal_stop_codon	3557340..3557342(+)		WP_070612845.1	DUF4141 domain-containing protein	100.0	65.6	97.1
MGA_2591	LOCUS_25880	sequence1:3559060..3559509(+)	internal_stop_codon	3558991..3558993(+)		WP_117508569.1	conjugative transposon protein TraK	100.0	72.0	69.8
MGA_2606	LOCUS_26030	sequence1:3573601..3574680(+)	partial			WP_008766765.1	FecR family protein	65.7	71.4	29.0
MGA_2618	LOCUS_26150	sequence1:3586912..3587631(+)	partial			WP_018339507.1	hypothetical protein	41.0	45.6	36.4
MGA_2627	LOCUS_26240	sequence1:3596418..3596876(+)	frameshift		3597098,3596837	WP_025868038.1	DUF6047 family protein	94.1	55.8	63.9
MGA_2628	LOCUS_26250	sequence1:3596873..3597112(+)	frameshift		3597098,3596837	WP_025868038.1	DUF6047 family protein	97.5	29.8	83.1
MGA_2630	LOCUS_26270	sequence1:3598309..3598674(-)	frameshift,internal_stop_codon	3598654..3598656(-)	3598800,3598632	WP_075966485.1	IS256 family transposase	89.3	26.7	92.6
MGA_2631	LOCUS_26280	sequence1:3598684..3599220(-)	frameshift,internal_stop_codon	3599244..3599246(-),3598653..3598655(-)	3598802,3599444,3598637	WP_075966485.1	IS256 family transposase	99.4	41.0	74.6
MGA_2632	LOCUS_26290	sequence1:3599245..3599418(-)	frameshift,internal_stop_codon	3599244..3599246(-)	3599444	WP_075966485.1	IS256 family transposase	100.0	14.1	91.2
MGA_2633	LOCUS_26300	sequence1:3599644..3600066(-)	frameshift,internal_stop_codon	3600141..3600143(-),3600252..3600254(-)	3599697,3600092	WP_077152662.1	IS1182 family transposase	70.7	17.9	93.9
MGA_2634	LOCUS_26310	sequence1:3600252..3600788(-)	frameshift,internal_stop_codon	3600141..3600143(-),3600252..3600254(-)	3600092,3600750	WP_077152662.1	IS1182 family transposase	93.3	30.0	91.6
MGA_2672	LOCUS_26690	sequence1:3644800..3645066(+)	frameshift		3645006	WP_011107081.1	hypothetical protein	83.0	45.9	87.7
MGA_2674	LOCUS_26710	sequence1:3645565..3646446(-)	frameshift		3646451	WP_009129703.1	IS1182 family transposase	100.0	59.6	97.3
MGA_2863	LOCUS_28600	sequence1:3871906..3873417(+)	frameshift		3871879	WP_007753560.1	DUF5695 domain-containing protein	100.0	72.5	78.9
MGA_2913	LOCUS_29100	sequence1:3957610..3958899(+)	partial			WP_008766149.1	hypothetical protein	37.8	36.2	95.1
MGA_2991	LOCUS_29880	sequence1:4064236..4064826(+)	partial			WP_011107246.1	glycosyltransferase family 4 protein	100.0	59.6	95.4
MGA_3048	LOCUS_30450	sequence1:4135577..4136023(-)	partial			WP_008766062.1	sugar porter family MFS transporter	100.0	31.6	93.2
MGA_3063	LOCUS_30600	sequence1:4159307..4160230(+)	partial			WP_008766017.1	O-antigen polymerase	100.0	73.1	98.7
MGA_3092	LOCUS_30890	sequence1:4195883..4196134(+)	partial			WP_005787364.1	hypothetical protein	56.6	17.6	59.3
MGA_3203	LOCUS_32000	sequence1:4333689..4333850(+)	frameshift		4333571,4333662	WP_048692555.1	mannose-1-phosphate guanylyltransferase	90.6	13.8	54.2
MGA_3259	LOCUS_32560	sequence1:4396018..4396956(+)	partial			WP_011107383.1	O-antigen ligase family protein	100.0	52.2	93.6
MGA_3357	LOCUS_33540	sequence1:4524729..4524908(-)	partial			WP_149944646.1	hypothetical protein	96.6	35.2	71.9
MGA_3632	LOCUS_36290	sequence1:4869485..4869670(-)	frameshift		4869675	WP_016274874.1	hypothetical protein	100.0	58.1	72.1
MGA_3696	LOCUS_36930	sequence1:4959168..4959509(-)	partial			WP_008765860.1	heavy-metal-associated domain-containing protein	77.9	73.9	97.7
MGA_3697	LOCUS_36940	sequence1:4959551..4960654(-)	partial			WP_055269995.1	TonB-dependent receptor	99.7	49.5	96.4
MGA_3702	LOCUS_36990	sequence1:4962930..4963142(-)	frameshift		4963159	WP_008628599.1	helix-turn-helix domain-containing protein	90.0	61.2	66.7
MGA_3703	LOCUS_37000	sequence1:4963326..4963496(+)	partial			WP_009292463.1	Ppx/GppA family phosphatase	100.0	18.4	60.7
MGA_3717	LOCUS_37140	sequence1:4977781..4978206(+)	frameshift,internal_stop_codon	4977754..4977756(+)	4978344,4978029	WP_200755826.1	site-specific integrase	58.9	20.3	89.2
MGA_3718	LOCUS_37150	sequence1:4978098..4978427(+)	frameshift		4978344,4978029,4978638	WP_200755826.1	site-specific integrase	96.3	25.4	72.4
MGA_3719	LOCUS_37160	sequence1:4978409..4978639(+)	frameshift		4978346,4978637	WP_200755826.1	site-specific integrase	100.0	18.6	89.5
MGA_3720	LOCUS_37170	sequence1:4978725..4979177(-)	frameshift		4979223	WP_004295290.1	flavodoxin	100.0	83.8	99.3
MGA_3742	LOCUS_37390	sequence1:5002302..5003360(-)	partial			WP_055269995.1	TonB-dependent receptor	94.3	44.9	94.6
MGA_3777	LOCUS_37740	sequence1:5041702..5042007(+)	partial			WP_008765888.1	helix-turn-helix transcriptional regulator	100.0	68.7	100.0
MGA_3791	LOCUS_37880	sequence1:5063005..5063463(+)	frameshift		5062871	WP_011203319.1	GyrI-like domain-containing protein	100.0	39.8	52.0
MGA_3797	LOCUS_37940	sequence1:5069320..5069970(+)	partial			WP_008765906.1	OmpA family protein	81.9	74.4	96.6
MGA_3810	LOCUS_38070	sequence1:5083325..5083600(+)	partial			WP_008765917.1	DUF805 domain-containing protein	100.0	72.2	100.0
MGA_3860	LOCUS_38570	sequence1:5143912..5144580(+)	frameshift		5144553	WP_011084771.1	S9 family peptidase	94.1	27.3	31.2
MGA_3861	LOCUS_38580	sequence1:5144601..5146145(+)	frameshift		5144553	WP_013533398.1	S9 family peptidase	99.4	67.0	49.0
MGA_3992	LOCUS_39890	sequence1:5298101..5298454(-)	partial			WP_195435952.1	ATP-binding protein	100.0	21.8	92.3
MGA_4186	LOCUS_41830	sequence1:5529312..5529488(-)	partial			WP_011107879.1	hypothetical protein	100.0	73.4	100.0
MGA_4233	LOCUS_42300	sequence1:5606219..5606368(-)	frameshift		5606236	WP_235016781.1	hypothetical protein	89.8	46.8	63.6
MGA_4307	LOCUS_43040	sequence1:5685298..5685792(-)	partial			WP_011107949.1	EpsG family protein	100.0	44.3	100.0
MGA_4385	LOCUS_43820	sequence1:5814471..5814695(+)	partial			WP_011107979.1	DUF4907 domain-containing protein	100.0	65.5	100.0
MGA_4416	LOCUS_44130	sequence1:5859749..5860909(+)	partial			WP_005789735.1	thiamine pyrophosphate-binding protein	91.7	61.1	81.9
MGA_4418	LOCUS_44150	sequence1:5862199..5862885(+)	partial			WP_005789735.1	thiamine pyrophosphate-binding protein	99.6	39.2	91.2
MGA_4522	LOCUS_45180	sequence1:6002951..6003127(-)	partial			WP_011107984.1	site-specific integrase	100.0	18.4	96.6
MGA_4528	LOCUS_45240	sequence1:6011533..6011805(+)	partial			WP_072530700.1	IS256 family transposase	68.9	15.1	96.8
MGA_4552	LOCUS_45480	sequence1:6044639..6045277(-)	internal_stop_codon	6045362..6045364(-)		WP_011203113.1	phage integrase SAM-like domain-containing protein	100.0	71.4	99.5
MGA_4553	LOCUS_45490	sequence1:6045362..6045532(-)	internal_stop_codon	6045362..6045364(-)		WP_011203113.1	phage integrase SAM-like domain-containing protein	100.0	18.9	98.2
MGA_4554	LOCUS_45500	sequence1:6045962..6046648(-)	partial			WP_011107984.1	site-specific integrase	97.8	70.8	97.8
MGA_4617	LOCUS_46130	sequence1:6126134..6126427(+)	partial			WP_008765097.1	SH3 beta-barrel fold-containing protein	76.3	61.2	33.8
MGA_4623	LOCUS_46190	sequence1:6131630..6131851(-)	partial			WP_005813423.1	SusC/RagA family TonB-linked outer membrane protein	98.6	6.8	69.4
MGA_4759	LOCUS_47550	sequence2:21789..22355(+)	partial			WP_008760911.1	M23 family metallopeptidase	71.3	42.2	42.6
MGA_4770	LOCUS_47660	sequence2:28529..29068(+)	partial			WP_080707197.1	DUF3575 domain-containing protein	100.0	39.2	97.8
