{ "type": "genome", "identifier": "GCF_022458865.1", "organism": "Paenibacillus periandrae", "title": "Paenibacillus periandrae", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Universidad de Salamanca", "publication": [ {} ], "properties": { "assembly_accession": "GCF_022458865.1", "bioproject": "PRJNA224116", "biosample": "SAMN23500624", "wgs_master": "JAJNMU000000000.1", "refseq_category": "reference genome", "taxid": "1761741", "species_taxid": "1761741", "organism_name": "Paenibacillus periandrae", "infraspecific_name": "strain=PM10", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2022/03/03", "asm_name": "ASM2245886v1", "asm_submitter": "Universidad de Salamanca", "gbrs_paired_asm": "GCA_022458865.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/022/458/865/GCF_022458865.1_ASM2245886v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "9785225", "genome_size_ungapped": "9785225", "gc_percent": "45.000000", "replicon_count": "0", "scaffold_count": "265", "contig_count": "265", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_022458865.1-RS_2024_03_28", "annotation_date": "2024-03-28", "total_gene_count": "9132", "protein_coding_gene_count": "8761", "non_coding_gene_count": "138", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2022-03-03", "dateModified": "2022-03-03", "datePublished": "2022-03-03", "_annotation": { "sample_count": 1, "sample_organism": [ "Paenibacillus periandrae" ], "sample_taxid": [ "1761741" ], "sample_host_organism": [ "Periandra mediterranea" ], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Not collected" ], "sample_host_location_id": [], "data_size": "2.803 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 8.33, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "9785225", "Number of Sequences": "265", "Longest Sequences (bp)": "569750", "N50 (bp)": "262477", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "45.2", "Number of CDSs": "9023", "Average Protein Length": "307.7", "Coding Ratio (%)": "85.1", "Number of rRNAs": "8", "Number of tRNAs": "79", "Number of CRISPRs": "1" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Paenibacillus periandrae", "strain": "strain=PM10", "accession": "GCA_022458865.1", "taxid": 1761741, "species_taxid": 1761741, "relation_to_type": "type", "validated": true, "ani": 100.0, 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