{ "tc_result": [ { "organism_name": "Pseudonocardia alaniniphila", "strain": "strain=Y-16303", "accession": "GCA_022524485.1", "taxid": 75291, "species_taxid": 75291, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 3066, "total_fragments": 3069, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Pseudonocardia xinjiangensis", "strain": "strain=JCM 11839", "accession": "GCA_012911925.1", "taxid": 75289, "species_taxid": 75289, "relation_to_type": "type", "validated": true, "ani": 85.2815, "matched_fragments": 1785, "total_fragments": 3069, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudonocardia nigra", "strain": "strain=DSM 104088", "accession": "GCA_019396355.1", "taxid": 1921578, "species_taxid": 1921578, "relation_to_type": "type", "validated": true, "ani": 81.2087, "matched_fragments": 1251, "total_fragments": 3069, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudonocardia kunmingensis", "strain": "strain=DSM 45301", "accession": "GCA_006716445.1", "taxid": 630975, "species_taxid": 630975, "relation_to_type": "type", "validated": true, "ani": 80.7283, "matched_fragments": 1388, "total_fragments": 3069, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudonocardia hierapolitana", "strain": "strain=DSM 45671", "accession": "GCA_007994075.1", "taxid": 1128676, "species_taxid": 1128676, "relation_to_type": "type", "validated": true, "ani": 80.6535, "matched_fragments": 1411, "total_fragments": 3069, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudonocardia cypriaca", "strain": "strain=DSM 45511", "accession": "GCA_006717045.1", "taxid": 882449, "species_taxid": 882449, "relation_to_type": "type", "validated": true, "ani": 80.6267, "matched_fragments": 1358, "total_fragments": 3069, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudonocardia hydrocarbonoxydans", "strain": "strain=NBRC 14498", "accession": "GCA_006539565.1", "taxid": 76726, "species_taxid": 76726, "relation_to_type": "type", "validated": true, "ani": 80.4665, "matched_fragments": 1031, "total_fragments": 3069, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudonocardia oceani", "strain": "strain=KRD185", "accession": "GCA_019263585.2", "taxid": 2792013, "species_taxid": 2792013, "relation_to_type": "type", "validated": true, "ani": 80.2116, "matched_fragments": 1130, "total_fragments": 3069, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudonocardia broussonetiae", "strain": "strain=Gen 01", "accession": "GCA_013155125.1", "taxid": 2736640, "species_taxid": 2736640, "relation_to_type": "type", "validated": true, "ani": 80.131, "matched_fragments": 1198, "total_fragments": 3069, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudonocardia petroleophila", "strain": "strain=CGMCC 4.1532", "accession": "GCA_014235185.1", "taxid": 37331, "species_taxid": 37331, "relation_to_type": "type", "validated": true, "ani": 80.13, "matched_fragments": 1148, "total_fragments": 3069, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudonocardia dioxanivorans", "strain": "strain=CB1190", "accession": "GCA_000196675.2", "taxid": 240495, "species_taxid": 240495, "relation_to_type": "type", "validated": true, "ani": 79.1299, "matched_fragments": 1057, "total_fragments": 3069, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudonocardia sulfidoxydans", "strain": "strain=NBRC 16205", "accession": "GCA_007989085.1", "taxid": 54011, "species_taxid": 54011, "relation_to_type": "type", "validated": true, "ani": 79.0414, "matched_fragments": 970, "total_fragments": 3069, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_012911925.1", "gtdb_species": "s__Pseudonocardia xinjiangensis", "ani": 85.2535, "matched_fragments": 1791, "total_fragments": 3069, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Pseudonocardiaceae;g__Pseudonocardia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_001942415.1", "gtdb_species": "s__Pseudonocardia sp001942415", "ani": 81.0893, "matched_fragments": 1256, "total_fragments": 3069, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Pseudonocardiaceae;g__Pseudonocardia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_006716445.1", "gtdb_species": "s__Pseudonocardia kunmingensis", "ani": 80.7043, "matched_fragments": 1394, "total_fragments": 3069, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Pseudonocardiaceae;g__Pseudonocardia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_006717045.1", "gtdb_species": "s__Pseudonocardia cypriaca", "ani": 80.6768, "matched_fragments": 1347, "total_fragments": 3069, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Pseudonocardiaceae;g__Pseudonocardia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_002262885.1", "gtdb_species": "s__Pseudonocardia sp002262885", "ani": 80.6594, "matched_fragments": 1415, "total_fragments": 3069, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Pseudonocardiaceae;g__Pseudonocardia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_007994075.1", "gtdb_species": "s__Pseudonocardia hierapolitana", "ani": 80.6437, "matched_fragments": 1413, "total_fragments": 3069, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Pseudonocardiaceae;g__Pseudonocardia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_001942185.1", "gtdb_species": "s__Pseudonocardia sp001942185", "ani": 80.6041, "matched_fragments": 1360, "total_fragments": 3069, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Pseudonocardiaceae;g__Pseudonocardia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_006539565.1", "gtdb_species": "s__Pseudonocardia hydrocarbonoxydans", "ani": 80.446, "matched_fragments": 1035, "total_fragments": 3069, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Pseudonocardiaceae;g__Pseudonocardia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_001899645.1", "gtdb_species": "s__Pseudonocardia sp001899645", "ani": 80.414, "matched_fragments": 1124, "total_fragments": 3069, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Pseudonocardiaceae;g__Pseudonocardia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.47", "min_intra_species_ani": "99.47", "mean_intra_species_af": "0.91", "min_intra_species_af": "0.91", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_019263585.1", "gtdb_species": "s__Pseudonocardia sp019263585", "ani": 80.2022, "matched_fragments": 1132, "total_fragments": 3069, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Pseudonocardiaceae;g__Pseudonocardia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.90", "min_intra_species_ani": "99.65", "mean_intra_species_af": "0.98", "min_intra_species_af": "0.94", "num_clustered_genomes": 5, "status": "-" }, { "accession": "GCF_014235185.1", "gtdb_species": "s__Pseudonocardia sp014235185", "ani": 80.1652, "matched_fragments": 1142, "total_fragments": 3069, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Pseudonocardiaceae;g__Pseudonocardia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_013155125.1", "gtdb_species": "s__Pseudonocardia broussonetiae", "ani": 80.1264, "matched_fragments": 1199, "total_fragments": 3069, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Pseudonocardiaceae;g__Pseudonocardia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_012911875.1", "gtdb_species": "s__Pseudonocardia bannensis", "ani": 79.9593, "matched_fragments": 962, "total_fragments": 3069, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Pseudonocardiaceae;g__Pseudonocardia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_018531445.1", "gtdb_species": "s__Pseudonocardia sp018531445", "ani": 79.9146, "matched_fragments": 1179, "total_fragments": 3069, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Pseudonocardiaceae;g__Pseudonocardia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_002583555.1", "gtdb_species": "s__Pseudonocardia sp002583555", "ani": 79.2169, "matched_fragments": 956, "total_fragments": 3069, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Pseudonocardiaceae;g__Pseudonocardia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000196675.1", "gtdb_species": "s__Pseudonocardia dioxanivorans", "ani": 79.1742, "matched_fragments": 1047, "total_fragments": 3069, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Pseudonocardiaceae;g__Pseudonocardia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.76", "min_intra_species_ani": "98.74", "mean_intra_species_af": "0.91", "min_intra_species_af": "0.91", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_007989085.1", "gtdb_species": "s__Pseudonocardia sulfidoxydans", "ani": 79.0817, "matched_fragments": 961, "total_fragments": 3069, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Pseudonocardiaceae;g__Pseudonocardia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }