{ "type": "genome", "identifier": "GCF_022647665.1", "organism": "Streptomyces formicae", "title": "Streptomyces formicae", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Center for Research in Agricultural Genomics (CRAG)", "publication": [ {} ], "properties": { "assembly_accession": "GCF_022647665.1", "bioproject": "PRJNA224116", "biosample": "SAMN18318495", "wgs_master": "na", "refseq_category": "reference genome", "taxid": "1616117", "species_taxid": "1616117", "organism_name": "Streptomyces formicae", "infraspecific_name": "strain=1H-GS9", "isolate": "na", "version_status": "latest", "assembly_level": "Complete Genome", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2022/03/21", "asm_name": "ASM2264766v1", "asm_submitter": "Center for Research in Agricultural Genomics (CRAG)", "gbrs_paired_asm": "GCA_022647665.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/022/647/665/GCF_022647665.1_ASM2264766v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "8205064", "genome_size_ungapped": "8205064", "gc_percent": "71.000000", "replicon_count": "2", "scaffold_count": "2", "contig_count": "2", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_022647665.1-RS_2024_04_06", "annotation_date": "2024-04-06", "total_gene_count": "7451", "protein_coding_gene_count": "6991", "non_coding_gene_count": "91", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2022-03-21", "dateModified": "2022-03-21", "datePublished": "2022-03-21", "_annotation": { "sample_count": 1, "sample_organism": [ "Streptomyces formicae" ], "sample_taxid": [ "1616117" ], "sample_host_organism": [ "Camponotus japonicus" 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"Streptomyces minutiscleroticus", "strain": "strain=JCM 4790", "accession": "GCA_014650875.1", "taxid": 68238, "species_taxid": 68238, "relation_to_type": "type", "validated": true, "ani": 82.1676, "matched_fragments": 1385, "total_fragments": 2734, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces lomondensis", "strain": "strain=JCM 4866", "accession": "GCA_014651035.1", "taxid": 68229, "species_taxid": 68229, "relation_to_type": "type", "validated": true, "ani": 81.9828, "matched_fragments": 1443, "total_fragments": 2734, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces lomondensis", "strain": "strain=DSM 41428", "accession": "GCA_021440105.1", "taxid": 68229, "species_taxid": 68229, "relation_to_type": "type", "validated": true, "ani": 81.9555, "matched_fragments": 1445, "total_fragments": 2734, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces spiralis", "strain": "strain=JCM 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