{
    "type": "genome",
    "identifier": "GCF_022808915.1",
    "organism": "Fundidesulfovibrio terrae",
    "title": "Fundidesulfovibrio terrae",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "Key Laboratory of Soil Environmental Health and Regulation, College of Resources and Environment",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_022808915.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN26351015",
        "wgs_master": "JAKZFS000000000.1",
        "refseq_category": "reference genome",
        "taxid": "2922866",
        "species_taxid": "2922866",
        "organism_name": "Fundidesulfovibrio terrae",
        "infraspecific_name": "strain=SG127",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Scaffold",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/04/02",
        "asm_name": "ASM2280891v1",
        "asm_submitter": "Key Laboratory of Soil Environmental Health and Regulation, College of Resources and Environment",
        "gbrs_paired_asm": "GCA_022808915.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/022/808/915/GCF_022808915.1_ASM2280891v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "3904129",
        "genome_size_ungapped": "3904119",
        "gc_percent": "64.500000",
        "replicon_count": "0",
        "scaffold_count": "7",
        "contig_count": "7",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_022808915.1-RS_2024_04_15",
        "annotation_date": "2024-04-15",
        "total_gene_count": "3539",
        "protein_coding_gene_count": "3478",
        "non_coding_gene_count": "52",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-04-02",
    "dateModified": "2022-04-02",
    "datePublished": "2022-04-02",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Fundidesulfovibrio terrae"
        ],
        "sample_taxid": [
            "2922866"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "China"
        ],
        "sample_host_location_id": [],
        "data_size": "1.080 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 91.67,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "3904129",
        "Number of Sequences": "7",
        "Longest Sequences (bp)": "1536752",
        "N50 (bp)": "815047",
        "Gap Ratio (%)": "0.000256",
        "GCcontent (%)": "64.6",
        "Number of CDSs": "3538",
        "Average Protein Length": "330.4",
        "Coding Ratio (%)": "89.8",
        "Number of rRNAs": "1",
        "Number of tRNAs": "46",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Fundidesulfovibrio putealis",
                "strain": "strain=DSM 16056",
                "accession": "GCA_000429325.1",
                "taxid": 270496,
                "species_taxid": 270496,
                "relation_to_type": "type",
                "validated": true,
                "ani": 83.395,
                "matched_fragments": 886,
                "total_fragments": 1298,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Fundidesulfovibrio magnetotacticus",
                "strain": "strain=FSS-1",
                "accession": "GCA_013019105.1",
                "taxid": 2730080,
                "species_taxid": 2730080,
                "relation_to_type": "type",
                "validated": true,
                "ani": 82.9056,
                "matched_fragments": 790,
                "total_fragments": 1298,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Solidesulfovibrio alcoholivorans",
                "strain": "strain=DSM 5433",
                "accession": "GCA_000702665.1",
                "taxid": 81406,
                "species_taxid": 81406,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.3209,
                "matched_fragments": 403,
                "total_fragments": 1298,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Solidesulfovibrio magneticus",
                "strain": "strain=RS-1",
                "accession": "GCA_000010665.1",
                "taxid": 184917,
                "species_taxid": 184917,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.1474,
                "matched_fragments": 397,
                "total_fragments": 1298,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Solidesulfovibrio fructosivorans",
                "strain": "strain=JJ",
                "accession": "GCA_000179555.1",
                "taxid": 878,
                "species_taxid": 878,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.1051,
                "matched_fragments": 365,
                "total_fragments": 1298,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Solidesulfovibrio carbinolicus",
                "strain": "strain=DSM 3852",
                "accession": "GCA_004135975.1",
                "taxid": 296842,
                "species_taxid": 296842,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.0926,
                "matched_fragments": 403,
                "total_fragments": 1298,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Desulfovibrio sulfodismutans",
                "strain": "strain=DSM 3696",
                "accession": "GCA_013376455.1",
                "taxid": 63561,
                "species_taxid": 63561,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.0344,
                "matched_fragments": 382,
                "total_fragments": 1298,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Desulfovibrio carbinoliphilus subsp. oakridgensis",
                "strain": "strain=FW-101-2B",
                "accession": "GCA_000177215.2",
                "taxid": 694327,
                "species_taxid": 345370,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.8776,
                "matched_fragments": 379,
                "total_fragments": 1298,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Cupidesulfovibrio termitidis",
                "strain": "strain=HI1",
                "accession": "GCA_000504305.1",
                "taxid": 42252,
                "species_taxid": 42252,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.5905,
                "matched_fragments": 312,
                "total_fragments": 1298,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 91.67,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCF_000429325.1",
                "gtdb_species": "s__Fundidesulfovibrio putealis",
                "ani": 83.3744,
                "matched_fragments": 888,
                "total_fragments": 1298,
                "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota_I;c__Desulfovibrionia;o__Desulfovibrionales;f__Desulfovibrionaceae;g__Fundidesulfovibrio",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_013019105.1",
                "gtdb_species": "s__Fundidesulfovibrio sp013019105",
                "ani": 82.8374,
                "matched_fragments": 796,
                "total_fragments": 1298,
                "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota_I;c__Desulfovibrionia;o__Desulfovibrionales;f__Desulfovibrionaceae;g__Fundidesulfovibrio",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_009773665.1",
                "gtdb_species": "s__Fundidesulfovibrio sp009773665",
                "ani": 82.8105,
                "matched_fragments": 530,
                "total_fragments": 1298,
                "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota_I;c__Desulfovibrionia;o__Desulfovibrionales;f__Desulfovibrionaceae;g__Fundidesulfovibrio",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016208105.1",
                "gtdb_species": "s__Fundidesulfovibrio sp016208105",
                "ani": 82.0919,
                "matched_fragments": 756,
                "total_fragments": 1298,
                "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota_I;c__Desulfovibrionia;o__Desulfovibrionales;f__Desulfovibrionaceae;g__Fundidesulfovibrio",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.98",
                "min_intra_species_ani": "99.98",
                "mean_intra_species_af": "0.95",
                "min_intra_species_af": "0.95",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCF_000702665.1",
                "gtdb_species": "s__Solidesulfovibrio alcoholivorans",
                "ani": 78.3206,
                "matched_fragments": 403,
                "total_fragments": 1298,
                "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota_I;c__Desulfovibrionia;o__Desulfovibrionales;f__Desulfovibrionaceae;g__Solidesulfovibrio",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_002482565.1",
                "gtdb_species": "s__Solidesulfovibrio magneticus_B",
                "ani": 78.2979,
                "matched_fragments": 386,
                "total_fragments": 1298,
                "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota_I;c__Desulfovibrionia;o__Desulfovibrionales;f__Desulfovibrionaceae;g__Solidesulfovibrio",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_000010665.1",
                "gtdb_species": "s__Solidesulfovibrio magneticus",
                "ani": 78.1094,
                "matched_fragments": 402,
                "total_fragments": 1298,
                "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota_I;c__Desulfovibrionia;o__Desulfovibrionales;f__Desulfovibrionaceae;g__Solidesulfovibrio",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_004135975.1",
                "gtdb_species": "s__Solidesulfovibrio carbinolicus",
                "ani": 78.0854,
                "matched_fragments": 402,
                "total_fragments": 1298,
                "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota_I;c__Desulfovibrionia;o__Desulfovibrionales;f__Desulfovibrionaceae;g__Solidesulfovibrio",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_003525525.1",
                "gtdb_species": "s__Solidesulfovibrio sp003525525",
                "ani": 78.0798,
                "matched_fragments": 278,
                "total_fragments": 1298,
                "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota_I;c__Desulfovibrionia;o__Desulfovibrionales;f__Desulfovibrionaceae;g__Solidesulfovibrio",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_000526455.1",
                "gtdb_species": "s__Solidesulfovibrio magneticus_C",
                "ani": 78.047,
                "matched_fragments": 420,
                "total_fragments": 1298,
                "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota_I;c__Desulfovibrionia;o__Desulfovibrionales;f__Desulfovibrionaceae;g__Solidesulfovibrio",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_000177215.2",
                "gtdb_species": "s__Solidesulfovibrio carbinoliphilus",
                "ani": 77.9083,
                "matched_fragments": 375,
                "total_fragments": 1298,
                "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota_I;c__Desulfovibrionia;o__Desulfovibrionales;f__Desulfovibrionaceae;g__Solidesulfovibrio",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_genome_taxon": [
        "Fundidesulfovibrio",
        "terrae"
    ],
    "quality": 4,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}