{ "type": "genome", "identifier": "GCF_022869905.1", "organism": "Vibrio furnissii", "title": "Vibrio furnissii", "description": "na", "data type": "Genome sequencing and assembly", "organization": "National Institute of Advanced Industrial Science and Technology, Biomedical Research Institute", "publication": [ {} ], "properties": { "assembly_accession": "GCF_022869905.1", "bioproject": "PRJNA224116", "biosample": "SAMN14078808", "wgs_master": "na", "refseq_category": "na", "taxid": "29494", "species_taxid": "29494", "organism_name": "Vibrio furnissii", "infraspecific_name": "strain=PartQ-Vfurnissii-RM8376", "isolate": "na", "version_status": "latest", "assembly_level": "Complete Genome", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2022/04/11", "asm_name": "ASM2286990v1", "asm_submitter": "National Institute of Advanced Industrial Science and Technology, Biomedical Research Institute", "gbrs_paired_asm": "GCA_022869905.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/022/869/905/GCF_022869905.1_ASM2286990v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "4993314", "genome_size_ungapped": "4993314", "gc_percent": "50.500000", "replicon_count": "3", "scaffold_count": "3", "contig_count": "3", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_022869905.1-RS_2024_04_26", "annotation_date": "2024-04-26", "total_gene_count": "4649", "protein_coding_gene_count": "4463", "non_coding_gene_count": "144", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2022-04-11", "dateModified": "2022-04-11", "datePublished": "2022-04-11", "_annotation": { "sample_count": 1, "sample_organism": [ "Vibrio furnissii" ], "sample_taxid": [ "29494" ], "sample_host_organism": [ "missing" ], "sample_host_organism_id": [], "sample_host_disease": [ "missing" ], "sample_host_disease_id": [], "sample_host_location": [ "missing" ], "sample_host_location_id": [], "data_size": "1.414 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "4993314", "Number of Sequences": "3", "Longest Sequences (bp)": "3275680", "N50 (bp)": "3275680", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "50.6", "Number of CDSs": "4520", "Average Protein Length": "319.7", "Coding Ratio (%)": "86.8", "Number of rRNAs": "31", "Number of tRNAs": "110", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Vibrio furnissii", "strain": "strain=PartQ-Vfurnissii-RM8376", "accession": "GCA_022869905.1", "taxid": 29494, "species_taxid": 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