{
    "type": "genome",
    "identifier": "GCF_023008165.1",
    "organism": "Kordiimonas laminariae",
    "title": "Kordiimonas laminariae",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "Shandong Univerity at Weihai",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_023008165.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN25887744",
        "wgs_master": "JAKQZA000000000.1",
        "refseq_category": "reference genome",
        "taxid": "2917717",
        "species_taxid": "2917717",
        "organism_name": "Kordiimonas laminariae",
        "infraspecific_name": "strain=5E331",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/04/14",
        "asm_name": "ASM2300816v1",
        "asm_submitter": "Shandong Univerity at Weihai",
        "gbrs_paired_asm": "GCA_023008165.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/023/008/165/GCF_023008165.1_ASM2300816v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "3651059",
        "genome_size_ungapped": "3651059",
        "gc_percent": "46.000000",
        "replicon_count": "0",
        "scaffold_count": "27",
        "contig_count": "27",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_023008165.1-RS_2024_05_08",
        "annotation_date": "2024-05-08",
        "total_gene_count": "3502",
        "protein_coding_gene_count": "3436",
        "non_coding_gene_count": "53",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-04-14",
    "dateModified": "2022-04-14",
    "datePublished": "2022-04-14",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Kordiimonas laminariae"
        ],
        "sample_taxid": [
            "2917717"
        ],
        "sample_host_organism": [
            "fresh kelp"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "China: Rongcheng"
        ],
        "sample_host_location_id": [],
        "data_size": "1.042 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "3651059",
        "Number of Sequences": "27",
        "Longest Sequences (bp)": "719295",
        "N50 (bp)": "474336",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "46.2",
        "Number of CDSs": "3442",
        "Average Protein Length": "319.1",
        "Coding Ratio (%)": "90.3",
        "Number of rRNAs": "3",
        "Number of tRNAs": "47",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Kordiimonas laminariae",
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                "species_taxid": 2917717,
                "relation_to_type": "type",
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                "total_fragments": 1207,
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            {
                "organism_name": "Kordiimonas lacus",
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                "accession": "GCA_900101935.1",
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                "species_taxid": 637679,
                "relation_to_type": "type",
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                "ani": 77.5214,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Kordiimonas lacus",
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                "ani_threshold": 95,
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            },
            {
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                "accession": "GCA_001550065.1",
                "taxid": 1662421,
                "species_taxid": 1662421,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.2388,
                "matched_fragments": 107,
                "total_fragments": 1207,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
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                "accession": "GCA_014656395.1",
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                "species_taxid": 1735581,
                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 74,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Kordiimonas pumila",
                "strain": "strain=N18",
                "accession": "GCA_015240255.1",
                "taxid": 2161677,
                "species_taxid": 2161677,
                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 108,
                "total_fragments": 1207,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
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            "contamination": 0.0,
            "strain_heterogeneity": 0.0
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        "gtdb_result": [
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                "accession": "GCF_001550055.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Kordiimonadaceae;g__Kordiimonas",
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            },
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                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Kordiimonadaceae;g__Kordiimonas",
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                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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                "num_clustered_genomes": 1,
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            },
            {
                "accession": "GCF_015240255.1",
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                "mean_intra_species_ani": "N/A",
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                "min_intra_species_af": "N/A",
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            },
            {
                "accession": "GCA_013372975.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Kordiimonadaceae;g__Kordiimonas",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
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            {
                "accession": "GCA_016764715.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Kordiimonadaceae;g__Kordiimonas",
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            },
            {
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                "mean_intra_species_ani": "N/A",
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                "accession": "GCA_011088215.1",
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        ]
    },
    "_bac2feature": {
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    "_genome_taxon": [
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        "laminariae"
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    "quality": 5,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}