# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_74	LOCUS_00740	sequence01:74288..75526(+)	partial			WP_004191984.1	lipoprotein-releasing ABC transporter permease subunit	71.4	71.5	20.8
MGA_114	LOCUS_01140	sequence01:117242..118105(-)	partial			WP_011962766.1	phosphatidate cytidylyltransferase	64.1	65.3	36.6
MGA_198	LOCUS_01980	sequence01:210458..211468(+)	partial			WP_002556806.1	tetratricopeptide repeat protein	60.1	79.2	75.2
MGA_199	LOCUS_01990	sequence01:212810..215164(+)	partial			WP_020948717.1	surface-located membrane protein Lmp1	93.2	64.6	41.6
MGA_222	LOCUS_02220	sequence01:238170..238718(-)	partial			WP_002662521.1	membrane protein	97.8	65.1	42.5
MGA_256	LOCUS_02560	sequence01:281961..282347(-)	partial			WP_002556864.1	hypothetical protein	99.2	73.4	79.8
MGA_293	LOCUS_02930	sequence01:313912..314574(-)	partial			WP_014023546.1	putative lipid II flippase FtsW	97.3	58.8	77.6
MGA_348	LOCUS_03480	sequence01:372619..372903(+)	partial			WP_174220839.1	hypothetical protein	96.8	65.4	57.1
MGA_436	LOCUS_04340	sequence01:472926..473885(-)	partial			WP_002665246.1	cation:proton antiporter	99.7	45.4	80.5
MGA_442	LOCUS_04400	sequence01:475735..476457(-)	frameshift		475743	WP_002662392.1	RNA polymerase factor sigma-54	99.2	56.6	66.4
MGA_512	LOCUS_05100	sequence01:540592..542175(+)	partial			WP_011056995.1	SpoIIE family protein phosphatase	46.9	63.7	26.8
MGA_587	LOCUS_05850	sequence01:636005..636523(+)	partial			WP_002656803.1	J domain-containing protein	100.0	68.8	72.1
MGA_610	LOCUS_06080	sequence01:664587..665069(-)	frameshift,internal_stop_codon	664646..664648(-)	664655	WP_002657333.1	ribonuclease M5	80.6	70.2	58.9
MGA_658	LOCUS_06560	sequence01:718973..719641(-)	partial			WP_002657405.1	hypothetical protein	99.1	63.2	73.6
MGA_684	LOCUS_06820	sequence01:746546..746806(+)	partial			WP_010965447.1	fused FliR family export protein/FlhB family type III secretion system protein	93.0	13.4	36.6
MGA_701	LOCUS_06990	sequence01:762295..762519(+)	partial			WP_002663439.1	rod shape-determining protein MreD	100.0	46.2	56.8
MGA_730	LOCUS_07280	sequence01:797891..800419(+)	partial			WP_010889813.1	P83/100 family protein	53.8	67.1	53.6
MGA_776	LOCUS_07740	sequence01:841389..843026(+)	partial			WP_002678901.1	S1C family serine protease	72.5	78.5	35.5
MGA_812	LOCUS_08100	sequence01:884400..885839(-)	partial			WP_013097567.1	PTS N-acetyl glucosamine transporter subunit IIABC	99.6	71.6	44.9
MGA_832	LOCUS_08300	sequence01:920650..921099(+)	frameshift		921298,920744,921069,921214,921295	WP_010890583.1	peptide ABC transporter substrate-binding protein	88.6	24.9	59.8
MGA_833	LOCUS_08310	sequence01:921053..921286(+)	frameshift		921298,921069,921214,921295	WP_002656717.1	peptide ABC transporter substrate-binding protein	64.9	9.5	74.0
MGA_834	LOCUS_08320	sequence01:921389..921679(+)	frameshift		921298,921655,921820,921214,921295	WP_002656717.1	peptide ABC transporter substrate-binding protein	90.6	16.3	57.5
MGA_835	LOCUS_08330	sequence01:921803..922096(+)	frameshift,internal_stop_codon	922144..922146(+)	922088,921817,921652	WP_002656717.1	peptide ABC transporter substrate-binding protein	94.8	17.4	68.5
MGA_852	LOCUS_08500	sequence03:1831..1980(-)	partial			WP_025408810.1	FAD-dependent thymidylate synthase	93.9	16.5	73.9
MGA_861	LOCUS_08590	sequence03:11616..12494(+)	partial			WP_010890320.1	plasmid maintenance protein	40.1	31.6	65.0
MGA_865	LOCUS_08630	sequence03:15007..15222(-)	partial			WP_010883909.1	DUF226 domain-containing protein	95.8	44.4	43.0
MGA_872	LOCUS_08700	sequence03:20583..20822(+)	internal_stop_codon	20820..20822(+)		WP_010890595.1	outer surface protein OspC	98.7	37.6	45.7
MGA_873	LOCUS_08710	sequence03:20892..21233(+)	internal_stop_codon	20820..20822(+)		WP_010890595.1	outer surface protein OspC	88.5	49.0	46.6
MGA_878	LOCUS_08760	sequence03:23290..23628(+)	internal_stop_codon	23218..23220(+)		WP_010890595.1	outer surface protein OspC	92.0	50.5	43.4
MGA_883	LOCUS_08810	sequence04:1115..1453(+)	partial			WP_010883878.1	Bdr family repetitive protein	74.1	46.7	44.4
MGA_886	LOCUS_08840	sequence04:2542..2805(-)	frameshift		2547	WP_010890288.1	plasmid maintenance protein	96.6	16.2	44.0
MGA_892	LOCUS_08900	sequence04:7963..8409(-)	partial			WP_075552700.1	variable large family protein	73.6	34.0	32.8
MGA_911	LOCUS_09090	sequence04:20763..21671(+)	frameshift,internal_stop_codon	20650..20652(+)	20757	WP_075552700.1	variable large family protein	91.1	81.9	33.5
MGA_923	LOCUS_09210	sequence05:4871..7984(-)	partial			WP_055166304.1	tape measure protein	21.1	19.6	23.7
MGA_933	LOCUS_09310	sequence05:13035..13304(-)	frameshift		13293	WP_010890294.1	hypothetical protein	94.4	46.4	72.6
MGA_934	LOCUS_09320	sequence05:13279..13590(-)	frameshift		13293	WP_010890294.1	hypothetical protein	77.7	44.2	76.2
MGA_946	LOCUS_09440	sequence05:23955..25514(+)	partial			WP_010890288.1	plasmid maintenance protein	69.4	82.4	43.4
MGA_955	LOCUS_09530	sequence06:3701..4933(+)	partial			WP_010883872.1	ERF family protein	42.0	57.0	26.5
MGA_985	LOCUS_09830	sequence06:25021..25362(+)	partial			WP_010883761.1	site-specific integrase	98.2	43.0	67.6
MGA_1010	LOCUS_10080	sequence07:14303..15112(+)	partial			WP_010883791.1	DUF228 domain-containing protein	72.5	83.5	41.6
MGA_1033	LOCUS_10310	sequence07:28272..29504(-)	partial			WP_010883872.1	ERF family protein	42.0	57.0	26.5
MGA_1041	LOCUS_10380	sequence08:6654..6971(-)	frameshift,internal_stop_codon	7039..7041(-)	7020	WP_010890595.1	outer surface protein OspC	94.3	43.8	46.1
MGA_1050	LOCUS_10470	sequence08:12402..12797(-)	frameshift,internal_stop_codon	12402..12404(-)	12329,12203	WP_010883736.1	chromosome replication/partitioning protein	78.6	54.1	61.2
MGA_1051	LOCUS_10480	sequence08:12878..13180(-)	frameshift,internal_stop_codon	12877..12879(-)	13239	WP_010883861.1	AAA family ATPase	98.0	39.8	65.3
MGA_1061	LOCUS_10580	sequence08:20825..21154(-)	partial			WP_010259844.1	Bdr family repetitive protein	79.8	39.2	32.2
MGA_1072	LOCUS_10690	sequence08:28087..28971(+)	partial			WP_010890300.1	P12 family lipoprotein	67.3	65.0	40.4
MGA_1079	LOCUS_10760	sequence09:3957..5183(+)	partial			WP_010883872.1	ERF family protein	42.2	57.0	26.5
MGA_1100	LOCUS_10970	sequence09:16742..18067(-)	partial			WP_002658423.1	hypothetical protein	52.8	71.5	77.3
MGA_1113	LOCUS_11100	sequence09:27981..28334(+)	frameshift		28316	WP_010890278.1	plasmid maintenance protein	98.3	31.4	60.9
MGA_1114	LOCUS_11110	sequence09:28511..29089(+)	frameshift		28316	WP_010890278.1	plasmid maintenance protein	91.7	48.4	58.2
MGA_1116	LOCUS_11130	sequence09:29632..30042(+)	frameshift		30033	WP_010883808.1	ParA family protein	98.5	53.8	76.1
MGA_1117	LOCUS_11140	sequence09:30093..30404(+)	frameshift		30033	WP_010883808.1	ParA family protein	91.3	37.8	78.7
MGA_1119	LOCUS_11160	sequence09:31029..31259(+)	frameshift		31304,31247	WP_010883737.1	Bdr family repetitive protein	85.5	27.6	60.0
MGA_1120	LOCUS_11170	sequence09:31482..31892(+)	partial			WP_010883732.1	ERF family protein	53.7	21.4	38.4
MGA_1141	LOCUS_11380	sequence09:43451..44776(-)	partial			WP_002658423.1	hypothetical protein	52.8	71.5	77.3
MGA_1157	LOCUS_11540	sequence10:3641..3889(+)	frameshift		3835,3862	WP_075552700.1	variable large family protein	79.3	18.4	46.4
MGA_1158	LOCUS_11550	sequence10:3918..4664(+)	frameshift		3835,3862	WP_075552700.1	variable large family protein	91.5	68.9	30.2
MGA_1177	LOCUS_11740	sequence10:20797..21606(-)	frameshift		20841	WP_010883836.1	PBSX family phage terminase large subunit	95.2	56.9	67.6
MGA_1180	LOCUS_11770	sequence10:23711..24028(+)	partial			WP_010883924.1	tyrosine-type recombinase/integrase	98.1	43.0	55.9
MGA_1185	LOCUS_11820	sequence10:26289..26438(-)	partial			WP_162009627.1	Bdr family repetitive protein	93.9	17.6	54.3
MGA_1193	LOCUS_11900	sequence10:34628..35017(+)	frameshift,internal_stop_codon	35015..35017(+)	35176,34636,34558	WP_010890337.1	adenine deaminase	89.1	21.0	70.4
MGA_1194	LOCUS_11910	sequence10:35329..35622(+)	frameshift,internal_stop_codon	35321..35323(+),35621..35623(+)	35176,35707	WP_010890337.1	adenine deaminase	100.0	17.7	57.7
MGA_1197	LOCUS_11940	sequence10:38922..39164(-)	partial			WP_010256197.1	hypothetical protein	98.8	47.0	68.4
MGA_1220	LOCUS_12170	sequence11:3026..3205(+)	frameshift,internal_stop_codon	3314..3316(+),3203..3205(+)	3283	WP_010258659.1	Bdr family repetitive protein	91.5	24.3	48.1
MGA_1228	LOCUS_12250	sequence11:8817..9242(-)	frameshift,internal_stop_codon	8817..8819(-)	8720,8617,8557	WP_010883783.1	ParA family protein	46.8	26.3	68.2
MGA_1229	LOCUS_12260	sequence11:9720..10034(-)	frameshift,internal_stop_codon	9720..9722(-),9714..9716(-)	9449,9524	WP_010890278.1	plasmid maintenance protein	96.2	28.1	50.5
MGA_1235	LOCUS_12320	sequence11:14684..15427(-)	frameshift		15426	WP_075552700.1	variable large family protein	95.1	69.4	32.0
MGA_1237	LOCUS_12340	sequence11:15773..16987(-)	frameshift		16986	WP_075552700.1	variable large family protein	59.2	67.3	31.4
MGA_1238	LOCUS_12350	sequence11:16951..17244(-)	frameshift		16986	WP_075552700.1	variable large family protein	85.6	24.2	48.4
MGA_1239	LOCUS_12360	sequence11:17381..18262(-)	partial			WP_075552700.1	variable large family protein	80.9	68.9	31.7
MGA_1240	LOCUS_12370	sequence11:18295..19191(-)	partial			WP_075552700.1	variable large family protein	60.1	49.7	28.9
MGA_1248	LOCUS_12450	sequence11:26506..26808(+)	frameshift,internal_stop_codon	26807..26809(+)	26446	WP_010883861.1	AAA family ATPase	98.0	39.8	65.3
MGA_1249	LOCUS_12460	sequence11:26889..27284(+)	frameshift,internal_stop_codon	27282..27284(+)	27482,27356	WP_010883736.1	chromosome replication/partitioning protein	78.6	54.1	61.2
MGA_1263	LOCUS_12600	sequence11:38705..38965(+)	partial			WP_010883927.1	DNA methyltransferase	81.4	7.0	61.8
MGA_1268	LOCUS_12650	sequence11:44995..45207(+)	frameshift		44992	WP_010883784.1	DUF244 domain-containing protein	90.0	14.3	63.5
MGA_1274	LOCUS_12710	sequence11:49848..50072(-)	frameshift		50238	WP_010883804.1	Mlp family lipoprotein	100.0	48.3	56.8
MGA_1276	LOCUS_12730	sequence11:51120..51464(+)	frameshift,internal_stop_codon	51462..51464(+)	51594,51563	WP_010890595.1	outer surface protein OspC	99.1	53.8	44.3
MGA_1277	LOCUS_12740	sequence11:52130..52471(+)	partial			WP_010883813.1	PBSX family phage terminase large subunit	99.1	24.9	46.4
MGA_1286	LOCUS_12830	sequence11:60278..61168(+)	partial			WP_075552700.1	variable large family protein	73.6	64.1	31.0
MGA_1288	LOCUS_12850	sequence11:62652..63176(+)	frameshift		62578	WP_010890595.1	outer surface protein OspC	95.4	76.7	50.3
MGA_1289	LOCUS_12860	sequence11:63430..64248(+)	partial			WP_075552700.1	variable large family protein	70.6	56.1	30.2
MGA_1304	LOCUS_13010	sequence11:74916..75110(-)	frameshift		74948,74903	WP_010890298.1	hypothetical protein	79.7	18.8	70.6
MGA_1306	LOCUS_13030	sequence11:75232..75420(-)	frameshift,internal_stop_codon	75417..75419(-)	75522,75389	WP_010890299.1	right-handed parallel beta-helix repeat-containing protein	75.8	5.3	61.7
MGA_1307	LOCUS_13040	sequence11:76236..76517(+)	frameshift		76499,76660,76581,76542	WP_010890288.1	plasmid maintenance protein	67.7	12.9	51.6
MGA_1308	LOCUS_13050	sequence11:76662..77096(+)	frameshift		76499,76660,76581,76542	WP_010890288.1	plasmid maintenance protein	86.1	34.6	29.9
MGA_1312	LOCUS_13090	sequence11:79187..79669(-)	frameshift		79204	WP_010890595.1	outer surface protein OspC	89.4	64.8	41.1
MGA_1317	LOCUS_13140	sequence11:83180..83359(-)	frameshift		83194	WP_075552700.1	variable large family protein	96.6	16.2	44.3
MGA_1335	LOCUS_13320	sequence12:10938..11183(-)	partial			WP_184125499.1	Bdr family repetitive protein	42.0	15.2	67.6
MGA_1350	LOCUS_13470	sequence12:27852..28919(+)	partial			WP_010890325.1	virulence associated lipoprotein	90.1	66.3	21.4
MGA_1403	LOCUS_14000	sequence12:85472..86287(+)	partial			WP_010890375.1	S2/P23 family protein	69.4	63.5	31.8
MGA_1441	LOCUS_14380	sequence12:113910..114509(-)	partial			WP_010890371.1	hypothetical protein	79.9	70.2	28.8
