{ "type": "genome", "identifier": "GCF_023062595.1", "organism": "Arthrobacter rhizosphaerae", "title": "Arthrobacter rhizosphaerae", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Northwest A&F University", "publication": [ {} ], "properties": { "assembly_accession": "GCF_023062595.1", "bioproject": "PRJNA224116", "biosample": "SAMN27398433", "wgs_master": "JALLAN000000000.1", "refseq_category": "reference genome", "taxid": "2855490", "species_taxid": "2855490", "organism_name": "Arthrobacter rhizosphaerae", "infraspecific_name": "strain=CCNWLXL 1-35", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2022/04/19", "asm_name": "ASM2306259v1", "asm_submitter": "Northwest A&F University", "gbrs_paired_asm": "GCA_023062595.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/023/062/595/GCF_023062595.1_ASM2306259v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "5022511", "genome_size_ungapped": "5022129", "gc_percent": "62.000000", "replicon_count": "0", "scaffold_count": "48", "contig_count": "48", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_023062595.1-RS_2024_08_29", "annotation_date": "2024-08-29", "total_gene_count": "4672", "protein_coding_gene_count": "4575", "non_coding_gene_count": "59", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2022-04-19", "dateModified": "2022-04-19", "datePublished": "2022-04-19", "_annotation": { "sample_count": 1, "sample_organism": [ "Arthrobacter rhizosphaerae" ], "sample_taxid": [ "2855490" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "China:Yangling, Shaanxi Province" ], "sample_host_location_id": [], "data_size": "1.420 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "5022511", "Number of Sequences": "48", "Longest Sequences (bp)": "522662", "N50 (bp)": "264119", "Gap Ratio (%)": "0.007626", "GCcontent (%)": "61.9", "Number of CDSs": "4632", "Average Protein Length": "318.1", "Coding Ratio (%)": "88.0", "Number of rRNAs": "4", "Number of tRNAs": "51", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Pseudarthrobacter sulfonivorans", "strain": "strain=ALL", "accession": "GCA_014712225.1", "taxid": 121292, "species_taxid": 121292, "relation_to_type": "type", "validated": true, "ani": 80.391, 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"organism_name": "Pseudarthrobacter phenanthrenivorans", "strain": "strain=Sphe3", "accession": "GCA_000189535.1", "taxid": 361575, "species_taxid": 361575, "relation_to_type": "type", "validated": true, "ani": 80.072, "matched_fragments": 572, "total_fragments": 1652, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudarthrobacter scleromae", "strain": "strain=CGMCC 1.3601", "accession": "GCA_014644515.1", "taxid": 158897, "species_taxid": 158897, "relation_to_type": "type", "validated": true, "ani": 79.9355, "matched_fragments": 576, "total_fragments": 1652, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudarthrobacter chlorophenolicus", "strain": "strain=A6", "accession": "GCA_900104315.1", "taxid": 85085, "species_taxid": 85085, "relation_to_type": "type", "validated": true, "ani": 79.8909, "matched_fragments": 568, "total_fragments": 1652, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Arthrobacter 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