{ "type": "genome", "identifier": "GCF_023208015.1", "organism": "Thermobifida alba", "title": "Thermobifida alba", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Seqomics Ltd.", "publication": [ {} ], "properties": { "assembly_accession": "GCF_023208015.1", "bioproject": "PRJNA224116", "biosample": "SAMN14604141", "wgs_master": "na", "refseq_category": "reference genome", "taxid": "53522", "species_taxid": "53522", "organism_name": "Thermobifida alba", "infraspecific_name": "strain=DSM 43795", "isolate": "na", "version_status": "latest", "assembly_level": "Complete Genome", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2022/05/02", "asm_name": "ASM2320801v1", "asm_submitter": "Seqomics Ltd.", "gbrs_paired_asm": "GCA_023208015.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/023/208/015/GCF_023208015.1_ASM2320801v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly 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cellulosilytica", "strain": "strain=TB100", "accession": "GCA_001517975.1", "taxid": 144786, "species_taxid": 144786, "relation_to_type": "type", "validated": true, "ani": 90.696, "matched_fragments": 1289, "total_fragments": 1634, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thermobifida halotolerans", "strain": "strain=DSM 44931", "accession": "GCA_003574835.2", "taxid": 483545, "species_taxid": 483545, "relation_to_type": "type", "validated": true, "ani": 88.8387, "matched_fragments": 1297, "total_fragments": 1634, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thermobifida halotolerans", "strain": "strain=YIM 90462", "accession": "GCA_001660385.1", "taxid": 483545, "species_taxid": 483545, "relation_to_type": "type", "validated": true, "ani": 88.7797, "matched_fragments": 1274, "total_fragments": 1634, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thermobifida fusca", "strain": "strain=NBRC 14071", 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"N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001660385.1", "gtdb_species": "s__Thermobifida halotolerans", "ani": 88.7761, "matched_fragments": 1274, "total_fragments": 1634, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptosporangiales;f__Streptosporangiaceae;g__Thermobifida", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.91", "min_intra_species_ani": "99.91", "mean_intra_species_af": "0.97", "min_intra_species_af": "0.97", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_001592045.1", "gtdb_species": "s__Thermobifida fusca", "ani": 84.8942, "matched_fragments": 1021, "total_fragments": 1634, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptosporangiales;f__Streptosporangiaceae;g__Thermobifida", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.75", "min_intra_species_ani": "99.61", 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"mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }, "_bac2feature": { "phenotypes": null, "cell_diameter": null, "cell_length": null, "doubling_h": null, "growth_tmp": 37.0, "optimum_tmp": 48.125, "optimum_ph": 7.0, "genome_size": 4278143.555, "gc_content": 67.513, "coding_genes": 3063.667, "rRNA16S_genes": 4.0, "tRNA_genes": 52.0, "gram_stain": 1.0, "sporulation": 1.0, "motility": 0.0, "range_salinity": null, "facultative_respiration": 0.0, "anaerobic_respiration": 0.0, "aerobic_respiration": 1.0, "mesophilic_range_tmp": 0.0, "thermophilic_range_tmp": 1.0, "psychrophilic_range_tmp": 0.0, "bacillus_cell_shape": 1.0, "coccus_cell_shape": 0.0, "filament_cell_shape": 0.0, "coccobacillus_cell_shape": 0.0, "vibrio_cell_shape": 0.0, "spiral_cell_shape": 0.0 }, "_genome_taxon": [ "Thermobifida", "alba" ], "quality": 5, "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f" }