{ "tc_result": [ { "organism_name": "Ligilactobacillus agilis", "strain": "strain=DSM 20509", "accession": "GCA_001436215.1", "taxid": 1601, "species_taxid": 1601, "relation_to_type": "type", "validated": true, "ani": 78.584, "matched_fragments": 103, "total_fragments": 834, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Ligilactobacillus animalis", "strain": "strain=KCTC 3501", "accession": "GCA_000183825.1", "taxid": 1605, "species_taxid": 1605, "relation_to_type": "type", "validated": true, "ani": 78.5035, "matched_fragments": 53, "total_fragments": 834, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Ligilactobacillus animalis", "strain": "strain=DSM 20602", "accession": "GCA_001434535.1", "taxid": 1605, "species_taxid": 1605, "relation_to_type": "type", "validated": true, "ani": 78.1588, "matched_fragments": 53, "total_fragments": 834, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Ligilactobacillus apodemi", "strain": "strain=DSM 16634", "accession": "GCA_001434405.1", "taxid": 307126, "species_taxid": 307126, "relation_to_type": "type", "validated": true, "ani": 78.1126, "matched_fragments": 73, "total_fragments": 834, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Ligilactobacillus apodemi", "strain": "strain=JCM 16172", "accession": "GCA_000615885.1", "taxid": 307126, "species_taxid": 307126, "relation_to_type": "type", "validated": true, "ani": 77.9836, "matched_fragments": 73, "total_fragments": 834, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Liquorilactobacillus nagelii", "strain": "strain=DSM 13675", "accession": "GCA_019444005.1", "taxid": 82688, "species_taxid": 82688, "relation_to_type": "type", "validated": true, "ani": 77.974, "matched_fragments": 108, "total_fragments": 834, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Liquorilactobacillus hordei", "strain": "strain=DSM 19519", "accession": "GCA_019443985.1", "taxid": 468911, "species_taxid": 468911, "relation_to_type": "type", "validated": true, "ani": 77.9137, "matched_fragments": 102, "total_fragments": 834, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Liquorilactobacillus nagelii", "strain": "strain=DSM 13675", "accession": "GCA_001434225.1", "taxid": 82688, "species_taxid": 82688, "relation_to_type": "type", "validated": true, "ani": 77.8656, "matched_fragments": 101, "total_fragments": 834, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Ligilactobacillus murinus", "strain": "strain=DSM 20452", "accession": "GCA_001436015.1", "taxid": 1622, "species_taxid": 1622, "relation_to_type": "type", "validated": true, "ani": 77.8557, "matched_fragments": 73, "total_fragments": 834, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Liquorilactobacillus mali", "strain": "strain=KCTC 3596", "accession": "GCA_000260415.1", "taxid": 1618, "species_taxid": 1618, "relation_to_type": "type", "validated": true, "ani": 77.7393, "matched_fragments": 90, "total_fragments": 834, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Ligilactobacillus salivarius", "strain": "strain=DSM 20554", "accession": "GCA_002079585.1", "taxid": 1624, "species_taxid": 1624, "relation_to_type": "type", "validated": true, "ani": 77.7321, "matched_fragments": 100, "total_fragments": 834, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Liquorilactobacillus hordei", "strain": "strain=DSM 19519", "accession": "GCA_001434845.1", "taxid": 468911, "species_taxid": 468911, "relation_to_type": "type", "validated": true, "ani": 77.702, "matched_fragments": 97, "total_fragments": 834, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Liquorilactobacillus mali", "strain": "strain=DSM 20444", "accession": "GCA_001436535.1", "taxid": 1618, "species_taxid": 1618, "relation_to_type": "type", "validated": true, "ani": 77.6515, "matched_fragments": 87, "total_fragments": 834, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Liquorilactobacillus oeni", "strain": "strain=DSM 19972", "accession": "GCA_001436275.1", "taxid": 303241, "species_taxid": 303241, "relation_to_type": "type", "validated": true, "ani": 77.3897, "matched_fragments": 65, "total_fragments": 834, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Ligilactobacillus pobuzihii", "strain": "strain=KCTC 13174", "accession": "GCA_001433815.1", "taxid": 449659, "species_taxid": 449659, "relation_to_type": "type", "validated": true, "ani": 77.372, "matched_fragments": 65, "total_fragments": 834, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Liquorilactobacillus uvarum", "strain": "strain=DSM 19971", "accession": "GCA_001434935.1", "taxid": 303240, "species_taxid": 303240, "relation_to_type": "type", "validated": true, "ani": 77.3018, "matched_fragments": 90, "total_fragments": 834, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Ligilactobacillus pobuzihii", "strain": "strain=E100301", "accession": "GCA_000349725.1", "taxid": 449659, "species_taxid": 449659, "relation_to_type": "type", "validated": true, "ani": 77.1564, "matched_fragments": 66, "total_fragments": 834, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Liquorilactobacillus capillatus", "strain": "strain=DSM 19910", "accession": "GCA_001434915.1", "taxid": 480931, "species_taxid": 480931, "relation_to_type": "type", "validated": true, "ani": 77.0581, "matched_fragments": 85, "total_fragments": 834, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_001436215.1", "gtdb_species": "s__Ligilactobacillus agilis", "ani": 78.584, "matched_fragments": 103, "total_fragments": 834, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Ligilactobacillus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.37", "min_intra_species_ani": "95.88", "mean_intra_species_af": "0.84", "min_intra_species_af": "0.79", "num_clustered_genomes": 29, "status": "-" }, { "accession": "GCF_001434535.1", "gtdb_species": "s__Ligilactobacillus animalis", "ani": 78.1588, "matched_fragments": 53, "total_fragments": 834, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Ligilactobacillus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.99", "min_intra_species_ani": "95.79", "mean_intra_species_af": "0.93", "min_intra_species_af": "0.90", "num_clustered_genomes": 12, "status": "-" }, { "accession": "GCF_001434405.1", "gtdb_species": "s__Ligilactobacillus apodemi", "ani": 78.1126, "matched_fragments": 73, "total_fragments": 834, "gtdb_taxonomy": 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"d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Ligilactobacillus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.97", "min_intra_species_ani": "99.97", "mean_intra_species_af": "0.92", "min_intra_species_af": "0.92", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_000260415.1", "gtdb_species": "s__Liquorilactobacillus mali", "ani": 77.7393, "matched_fragments": 90, "total_fragments": 834, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Liquorilactobacillus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.97", "min_intra_species_ani": "99.95", "mean_intra_species_af": "0.96", "min_intra_species_af": "0.94", "num_clustered_genomes": 4, "status": "-" }, { "accession": "GCF_001434845.1", "gtdb_species": "s__Liquorilactobacillus hordei", "ani": 77.702, "matched_fragments": 97, "total_fragments": 834, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Liquorilactobacillus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.13", "min_intra_species_ani": "98.13", "mean_intra_species_af": "0.87", "min_intra_species_af": "0.87", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_001591685.1", "gtdb_species": "s__Ligilactobacillus murinus", "ani": 77.7002, "matched_fragments": 70, "total_fragments": 834, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Ligilactobacillus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.01", "min_intra_species_ani": "96.68", "mean_intra_species_af": "0.83", "min_intra_species_af": "0.78", "num_clustered_genomes": 62, "status": "-" }, { "accession": "GCF_000615845.1", "gtdb_species": "s__Ligilactobacillus hayakitensis", "ani": 77.6193, "matched_fragments": 77, "total_fragments": 834, "gtdb_taxonomy": 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"d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Ligilactobacillus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.12", "min_intra_species_ani": "97.12", "mean_intra_species_af": "0.91", "min_intra_species_af": "0.91", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_019114385.1", "gtdb_species": "s__Ligilactobacillus excrementigallinarum", "ani": 76.658, "matched_fragments": 66, "total_fragments": 834, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Ligilactobacillus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }