{ "type": "genome", "identifier": "GCF_024170465.1", "organism": "Natronospira proteinivora", "title": "Natronospira proteinivora", "description": "na", "data type": "Genome sequencing and assembly", "organization": "DOE Joint Genome Institute", "publication": [ {} ], "properties": { "assembly_accession": "GCF_024170465.1", "bioproject": "PRJNA224116", "biosample": "SAMN18243417", "wgs_master": "JALJYF000000000.1", "refseq_category": "reference genome", "taxid": "1807133", "species_taxid": "1807133", "organism_name": "Natronospira proteinivora", "infraspecific_name": "strain=BSker1", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2022/07/06", "asm_name": "ASM2417046v1", "asm_submitter": "DOE Joint Genome Institute", "gbrs_paired_asm": "GCA_024170465.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/024/170/465/GCF_024170465.1_ASM2417046v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "2926162", "genome_size_ungapped": "2926162", "gc_percent": "60.000000", "replicon_count": "0", "scaffold_count": "4", "contig_count": "4", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_024170465.1-RS_2024_09_15", "annotation_date": "2024-09-15", "total_gene_count": "2656", "protein_coding_gene_count": "2584", "non_coding_gene_count": "51", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2022-07-06", "dateModified": "2022-07-06", "datePublished": "2022-07-06", "_annotation": { "sample_count": 1, "sample_organism": [ "Natronospira proteinivora" ], "sample_taxid": [ "1807133" ], "sample_host_organism": [ "not applicable" ], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "missing" ], "sample_host_location_id": [], "data_size": "0.824 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "2926162", "Number of Sequences": "4", "Longest Sequences (bp)": "1569220", "N50 (bp)": "1569220", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "59.8", "Number of CDSs": "2624", "Average Protein Length": "336.0", "Coding Ratio (%)": "90.4", "Number of rRNAs": "3", "Number of tRNAs": "45", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Natronospira proteinivora", "strain": "strain=BSker1", "accession": "GCA_024170465.1", "taxid": 1807133, "species_taxid": 1807133, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 974, 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"Ectothiorhodospira marina", "strain": "strain=DSM 241", "accession": "GCA_900109495.1", "taxid": 1396821, "species_taxid": 1396821, "relation_to_type": "type", "validated": true, "ani": 76.2981, "matched_fragments": 84, "total_fragments": 974, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thiohalobacter thiocyanaticus", "strain": "strain=Hrh1", "accession": "GCA_003932505.1", "taxid": 585455, "species_taxid": 585455, "relation_to_type": "type", "validated": true, "ani": 76.2585, "matched_fragments": 90, "total_fragments": 974, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Inmirania thermothiophila", "strain": "strain=DSM 100275", "accession": "GCA_003751635.1", "taxid": 1750597, "species_taxid": 1750597, "relation_to_type": "type", "validated": true, "ani": 76.2171, "matched_fragments": 72, "total_fragments": 974, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thioalbus denitrificans", "strain": "strain=DSM 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