{
    "type": "genome",
    "identifier": "GCF_024171815.1",
    "organism": "Williamsia maris",
    "title": "Williamsia maris",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "DOE Joint Genome Institute",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_024171815.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN05660695",
        "wgs_master": "JAMTCJ000000000.1",
        "refseq_category": "reference genome",
        "taxid": "72806",
        "species_taxid": "72806",
        "organism_name": "Williamsia maris",
        "infraspecific_name": "strain=DSM 44693",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/07/06",
        "asm_name": "ASM2417181v1",
        "asm_submitter": "DOE Joint Genome Institute",
        "gbrs_paired_asm": "GCA_024171815.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/024/171/815/GCF_024171815.1_ASM2417181v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "4931535",
        "genome_size_ungapped": "4931535",
        "gc_percent": "68.000000",
        "replicon_count": "0",
        "scaffold_count": "5",
        "contig_count": "5",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_024171815.1-RS_2024_08_29",
        "annotation_date": "2024-08-29",
        "total_gene_count": "4632",
        "protein_coding_gene_count": "4550",
        "non_coding_gene_count": "54",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-07-06",
    "dateModified": "2022-07-06",
    "datePublished": "2022-07-06",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Williamsia maris"
        ],
        "sample_taxid": [
            "72806"
        ],
        "sample_host_organism": [
            "not applicable"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Japan"
        ],
        "sample_host_location_id": [],
        "data_size": "1.332 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "4931535",
        "Number of Sequences": "5",
        "Longest Sequences (bp)": "1421026",
        "N50 (bp)": "1405484",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "68.2",
        "Number of CDSs": "4674",
        "Average Protein Length": "325.0",
        "Coding Ratio (%)": "92.4",
        "Number of rRNAs": "3",
        "Number of tRNAs": "53",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Williamsia maris",
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                "species_taxid": 72806,
                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 1641,
                "total_fragments": 1641,
                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Williamsia phyllosphaerae",
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                "accession": "GCA_014635305.1",
                "taxid": 885042,
                "species_taxid": 885042,
                "relation_to_type": "type",
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                "matched_fragments": 1415,
                "total_fragments": 1641,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Williamsia herbipolensis",
                "strain": "strain=ARP1",
                "accession": "GCA_000964005.1",
                "taxid": 1603258,
                "species_taxid": 1603258,
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                "total_fragments": 1641,
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                "status": "below_threshold"
            },
            {
                "organism_name": "Williamsia deligens",
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                "accession": "GCA_024171765.1",
                "taxid": 321325,
                "species_taxid": 321325,
                "relation_to_type": "type",
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                "ani": 80.6559,
                "matched_fragments": 897,
                "total_fragments": 1641,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Williamsia serinedens",
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                "accession": "GCA_024171725.1",
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                "species_taxid": 391736,
                "relation_to_type": "type",
                "validated": true,
                "ani": 80.6278,
                "matched_fragments": 905,
                "total_fragments": 1641,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Gordonia lacunae",
                "strain": "strain=BS2",
                "accession": "GCA_002149015.1",
                "taxid": 417102,
                "species_taxid": 417102,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.8228,
                "matched_fragments": 609,
                "total_fragments": 1641,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Gordonia crocea",
                "strain": "strain=NBRC 107697",
                "accession": "GCA_009932435.1",
                "taxid": 589162,
                "species_taxid": 589162,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.5132,
                "matched_fragments": 475,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Nocardia harenae",
                "strain": "strain=NBRC 108248",
                "accession": "GCA_001612885.1",
                "taxid": 358707,
                "species_taxid": 358707,
                "relation_to_type": "type",
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                "ani": 77.4013,
                "matched_fragments": 455,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Mycolicibacterium elephantis",
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                "accession": "GCA_004014805.1",
                "taxid": 81858,
                "species_taxid": 81858,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.3683,
                "matched_fragments": 383,
                "total_fragments": 1641,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
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            "contamination": 0.0,
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                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Williamsia_A",
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            },
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}