{ "tc_result": [ { "organism_name": "Vibrio aerogenes", "strain": "strain=LMG 19650", "accession": "GCA_024346755.1", "taxid": 92172, "species_taxid": 92172, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 1785, "total_fragments": 1788, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Vibrio aerogenes", "strain": "strain=CECT 7868", "accession": "GCA_900130105.1", "taxid": 92172, "species_taxid": 92172, "relation_to_type": "type", "validated": true, "ani": 99.9734, "matched_fragments": 1700, "total_fragments": 1788, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Vibrio quintilis", "strain": "strain=CECT 7734", "accession": "GCA_024529975.1", "taxid": 1117707, "species_taxid": 1117707, "relation_to_type": "type", "validated": true, "ani": 83.4791, "matched_fragments": 1346, "total_fragments": 1788, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Vibrio quintilis", "strain": "", "accession": "GCA_900143745.1", "taxid": 1117707, "species_taxid": 1117707, "relation_to_type": "type", "validated": true, "ani": 83.4197, "matched_fragments": 1293, "total_fragments": 1788, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Vibrio splendidus", "strain": "strain=LMG 19031", "accession": "GCA_024347615.1", "taxid": 29497, "species_taxid": 29497, "relation_to_type": "type", "validated": true, "ani": 79.4093, "matched_fragments": 119, "total_fragments": 1788, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Vibrio chagasii", "strain": "strain=LMG 21353", "accession": "GCA_024347355.1", "taxid": 170679, "species_taxid": 170679, "relation_to_type": "suspected-type", "validated": true, "ani": 79.3905, "matched_fragments": 112, "total_fragments": 1788, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Vibrio gazogenes", "strain": "strain=PB1", "accession": "GCA_023920225.1", "taxid": 687, "species_taxid": 687, "relation_to_type": "type", "validated": true, "ani": 78.675, "matched_fragments": 291, "total_fragments": 1788, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Vibrio rhizosphaerae", "strain": "strain=LMG 23790", "accession": "GCA_024347095.1", "taxid": 398736, "species_taxid": 398736, "relation_to_type": "type", "validated": true, "ani": 78.422, "matched_fragments": 307, "total_fragments": 1788, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Vibrio spartinae", "strain": "strain=CECT 9026", "accession": "GCA_024347135.1", "taxid": 1918945, "species_taxid": 1918945, "relation_to_type": "type", "validated": true, "ani": 78.3978, "matched_fragments": 298, "total_fragments": 1788, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Vibrio ziniensis", "strain": "strain=ZWAL4003", "accession": "GCA_011064285.1", "taxid": 2711221, "species_taxid": 2711221, "relation_to_type": "type", "validated": true, "ani": 78.3354, "matched_fragments": 158, "total_fragments": 1788, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Vibrio ruber", "strain": "strain=CECT 7878", "accession": "GCA_900163965.1", "taxid": 184755, "species_taxid": 184755, "relation_to_type": "type", "validated": true, "ani": 78.1923, "matched_fragments": 296, "total_fragments": 1788, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Vibrio rhizosphaerae", "strain": "strain=DSM 18581", "accession": "GCA_000711805.1", "taxid": 398736, "species_taxid": 398736, "relation_to_type": "type", "validated": true, "ani": 77.9258, "matched_fragments": 297, "total_fragments": 1788, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Vibrio spartinae", "strain": "strain=CECT 9026", "accession": "GCA_900149295.1", "taxid": 1918945, "species_taxid": 1918945, "relation_to_type": "type", "validated": true, "ani": 77.8134, "matched_fragments": 288, "total_fragments": 1788, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_900130105.1", "gtdb_species": "s__Vibrio aerogenes", "ani": 99.9734, "matched_fragments": 1700, "total_fragments": 1788, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "conclusive" }, { "accession": "GCF_900143745.1", "gtdb_species": "s__Vibrio quintilis", "ani": 83.4415, "matched_fragments": 1292, "total_fragments": 1788, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001547935.1", "gtdb_species": "s__Vibrio tritonius", "ani": 79.1389, "matched_fragments": 155, "total_fragments": 1788, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000176135.1", "gtdb_species": "s__Vibrio coralliilyticus", "ani": 78.5331, "matched_fragments": 143, "total_fragments": 1788, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.33", "min_intra_species_ani": "96.21", "mean_intra_species_af": "0.92", "min_intra_species_af": "0.87", "num_clustered_genomes": 36, "status": "-" }, { "accession": "GCF_011064285.1", "gtdb_species": "s__Vibrio ziniensis", "ani": 78.5069, "matched_fragments": 157, "total_fragments": 1788, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_002196515.1", "gtdb_species": "s__Vibrio gazogenes_A", "ani": 78.4414, "matched_fragments": 291, "total_fragments": 1788, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000222685.1", "gtdb_species": "s__Vibrio nigripulchritudo", "ani": 78.3327, "matched_fragments": 117, "total_fragments": 1788, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "96.90", "min_intra_species_ani": "96.77", "mean_intra_species_af": "0.92", "min_intra_species_af": "0.87", "num_clustered_genomes": 18, "status": "-" }, { "accession": "GCF_001506075.1", "gtdb_species": "s__Vibrio sp001506075", "ani": 78.2754, "matched_fragments": 290, "total_fragments": 1788, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_900163965.1", "gtdb_species": "s__Vibrio ruber", "ani": 78.2232, "matched_fragments": 295, "total_fragments": 1788, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_900129185.1", "gtdb_species": "s__Vibrio gazogenes", "ani": 78.0248, "matched_fragments": 276, "total_fragments": 1788, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.97", "min_intra_species_ani": "99.97", "mean_intra_species_af": "0.98", "min_intra_species_af": "0.98", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_000711805.1", "gtdb_species": "s__Vibrio rhizosphaerae", "ani": 77.969, "matched_fragments": 294, "total_fragments": 1788, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000222605.1", "gtdb_species": "s__Vibrio ichthyoenteri", "ani": 77.891, "matched_fragments": 109, "total_fragments": 1788, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_900149295.1", "gtdb_species": "s__Vibrio spartinae", "ani": 77.8165, "matched_fragments": 287, "total_fragments": 1788, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.28", "min_intra_species_ani": "99.28", "mean_intra_species_af": "0.90", "min_intra_species_af": "0.90", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_013113835.1", "gtdb_species": "s__Vibrio sp013113835", "ani": 77.8058, "matched_fragments": 137, "total_fragments": 1788, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_014841115.1", "gtdb_species": "s__Photobacterium sp014841115", "ani": 77.2268, "matched_fragments": 90, "total_fragments": 1788, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Photobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.86", "min_intra_species_ani": "98.86", "mean_intra_species_af": "0.94", "min_intra_species_af": "0.94", "num_clustered_genomes": 2, "status": "-" } ] }