{
    "type": "genome",
    "identifier": "GCF_024346975.1",
    "organism": "Vibrio neonatus",
    "title": "Vibrio neonatus",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "Laboratory of Microbiology, Division of Marine Life Science, Faculty of Fisheries Sciences, Hokkaido University",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_024346975.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMD00393688",
        "wgs_master": "na",
        "refseq_category": "reference genome",
        "taxid": "278860",
        "species_taxid": "278860",
        "organism_name": "Vibrio neonatus",
        "infraspecific_name": "strain=JCM 21521",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Complete Genome",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/07/13",
        "asm_name": "ASM2434697v1",
        "asm_submitter": "Laboratory of Microbiology, Division of Marine Life Science, Faculty of Fisheries Sciences, Hokkaido University",
        "gbrs_paired_asm": "GCA_024346975.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/024/346/975/GCF_024346975.1_ASM2434697v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "3840645",
        "genome_size_ungapped": "3840645",
        "gc_percent": "43.000000",
        "replicon_count": "2",
        "scaffold_count": "2",
        "contig_count": "2",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_024346975.1-RS_2024_10_11",
        "annotation_date": "2024-10-11",
        "total_gene_count": "3415",
        "protein_coding_gene_count": "3259",
        "non_coding_gene_count": "134",
        "pubmed_id": "34905112"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-07-13",
    "dateModified": "2022-07-13",
    "datePublished": "2022-07-13",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Vibrio neonatus"
        ],
        "sample_taxid": [
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        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Japan:Kanagawa"
        ],
        "sample_host_location_id": [],
        "data_size": "1.086 MB",
        "sample_ph_range": {
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            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
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        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
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    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "3840645",
        "Number of Sequences": "2",
        "Longest Sequences (bp)": "2746110",
        "N50 (bp)": "2746110",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "43.2",
        "Number of CDSs": "3329",
        "Average Protein Length": "328.9",
        "Coding Ratio (%)": "85.5",
        "Number of rRNAs": "28",
        "Number of tRNAs": "102",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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            },
            {
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                "relation_to_type": "type",
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            {
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                "ani_threshold": 95,
                "status": "below_threshold"
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            {
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Vibrio rarus",
                "strain": "strain=LMG 23674",
                "accession": "GCA_024347075.1",
                "taxid": 413403,
                "species_taxid": 413403,
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                "ani": 81.4168,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Vibrio toranzoniae",
                "strain": "strain=CECT 7225",
                "accession": "GCA_024347655.1",
                "taxid": 1194427,
                "species_taxid": 1194427,
                "relation_to_type": "type",
                "validated": true,
                "ani": 80.1223,
                "matched_fragments": 238,
                "total_fragments": 1279,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Vibrio cyclitrophicus",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Vibrio chagasii",
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                "accession": "GCA_024347355.1",
                "taxid": 170679,
                "species_taxid": 170679,
                "relation_to_type": "suspected-type",
                "validated": true,
                "ani": 79.9811,
                "matched_fragments": 254,
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                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
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            "contamination": 0.0,
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                "accession": "GCF_000496695.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio",
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    },
    "_bac2feature": {
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    "quality": 5,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}