{ "tc_result": [ { "organism_name": "Vibrio palustris", "strain": "strain=CECT 9027", "accession": "GCA_024346995.1", "taxid": 1918946, "species_taxid": 1918946, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 1244, "total_fragments": 1244, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Vibrio palustris", "strain": "strain=CECT 9027", "accession": "GCA_900162645.1", "taxid": 1918946, "species_taxid": 1918946, "relation_to_type": "type", "validated": true, "ani": 99.9776, "matched_fragments": 1221, "total_fragments": 1244, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Vibrio zhugei", "strain": "strain=HBUAS61001", "accession": "GCA_003716875.1", "taxid": 2479546, "species_taxid": 2479546, "relation_to_type": "type", "validated": true, "ani": 82.593, "matched_fragments": 788, "total_fragments": 1244, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Vibrio zhugei", "strain": "strain=KCTC 62784", "accession": "GCA_024347155.1", "taxid": 2479546, "species_taxid": 2479546, "relation_to_type": "type", "validated": true, "ani": 82.5714, "matched_fragments": 775, "total_fragments": 1244, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Vibrio nitrifigilis", "strain": "strain=NFV-1", "accession": "GCA_015686695.1", "taxid": 2789781, "species_taxid": 2789781, "relation_to_type": "type", "validated": true, "ani": 80.0895, "matched_fragments": 339, "total_fragments": 1244, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Vibrio tritonius", "strain": "strain=JCM 16456", "accession": "GCA_001547935.1", "taxid": 1435069, "species_taxid": 1435069, "relation_to_type": "type", "validated": true, "ani": 79.6357, "matched_fragments": 334, "total_fragments": 1244, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Vibrio crassostreae", "strain": "strain=LMG 22240", "accession": "GCA_024347415.1", "taxid": 246167, "species_taxid": 246167, "relation_to_type": "type", "validated": true, "ani": 79.5473, "matched_fragments": 173, "total_fragments": 1244, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Vibrio celticus", "strain": "strain=CECT 7224", "accession": "GCA_024347335.1", "taxid": 446372, "species_taxid": 446372, "relation_to_type": "type", "validated": true, "ani": 79.3858, "matched_fragments": 184, "total_fragments": 1244, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Vibrio natriegens", "strain": "strain=14048", "accession": "GCA_024508015.1", "taxid": 691, "species_taxid": 691, "relation_to_type": "type", "validated": true, "ani": 79.378, "matched_fragments": 193, "total_fragments": 1244, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Vibrio qinghaiensis", "strain": "strain=Q67", "accession": "GCA_002257545.1", "taxid": 2025808, "species_taxid": 2025808, "relation_to_type": "type", "validated": true, "ani": 79.3644, "matched_fragments": 219, "total_fragments": 1244, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Vibrio proteolyticus", "strain": "strain=NBRC 13287", "accession": "GCA_000467125.1", "taxid": 671, "species_taxid": 671, "relation_to_type": "type", "validated": true, "ani": 78.7022, "matched_fragments": 166, "total_fragments": 1244, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Vibrio tubiashii", "strain": "strain=ATCC 19109", "accession": "GCA_000222665.2", "taxid": 29498, "species_taxid": 29498, "relation_to_type": "suspected-type", "validated": true, "ani": 78.5223, "matched_fragments": 180, "total_fragments": 1244, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_900162645.1", "gtdb_species": "s__Vibrio palustris", "ani": 99.9776, "matched_fragments": 1221, "total_fragments": 1244, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "conclusive" }, { "accession": "GCF_003716875.1", "gtdb_species": "s__Vibrio zhugei", "ani": 82.5783, "matched_fragments": 788, "total_fragments": 1244, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_015686695.1", "gtdb_species": "s__Vibrio nitrifigilis", "ani": 80.1854, "matched_fragments": 343, "total_fragments": 1244, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.79", "min_intra_species_ani": "98.79", "mean_intra_species_af": "0.95", "min_intra_species_af": "0.95", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_019226825.1", "gtdb_species": "s__Vibrio sp004804295", "ani": 79.8098, "matched_fragments": 216, "total_fragments": 1244, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.23", "min_intra_species_ani": "99.23", "mean_intra_species_af": "0.93", "min_intra_species_af": "0.93", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_001547935.1", "gtdb_species": "s__Vibrio tritonius", "ani": 79.721, "matched_fragments": 335, "total_fragments": 1244, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_900460535.1", "gtdb_species": "s__Vibrio parahaemolyticus", "ani": 79.5632, "matched_fragments": 208, "total_fragments": 1244, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.33", "min_intra_species_ani": "97.74", "mean_intra_species_af": "0.94", "min_intra_species_af": "0.76", "num_clustered_genomes": 1553, "status": "-" }, { "accession": "GCF_000772105.1", "gtdb_species": "s__Vibrio tubiashii", "ani": 79.5113, "matched_fragments": 200, "total_fragments": 1244, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.61", "min_intra_species_ani": "95.85", "mean_intra_species_af": "0.96", "min_intra_species_af": "0.87", "num_clustered_genomes": 4, "status": "-" }, { "accession": "GCF_000764325.1", "gtdb_species": "s__Vibrio navarrensis", "ani": 79.4152, "matched_fragments": 173, "total_fragments": 1244, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.3805, "mean_intra_species_ani": "98.19", "min_intra_species_ani": "97.06", "mean_intra_species_af": "0.93", "min_intra_species_af": "0.87", "num_clustered_genomes": 22, "status": "-" }, { "accession": "GCF_002157735.2", "gtdb_species": "s__Vibrio aphrogenes", "ani": 79.3308, "matched_fragments": 153, "total_fragments": 1244, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_002934045.1", "gtdb_species": "s__Vibrio gangliei", "ani": 78.8362, "matched_fragments": 155, "total_fragments": 1244, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000467125.1", "gtdb_species": "s__Vibrio proteolyticus", "ani": 78.7023, "matched_fragments": 167, "total_fragments": 1244, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.93", "min_intra_species_ani": "98.89", "mean_intra_species_af": "0.93", "min_intra_species_af": "0.91", "num_clustered_genomes": 5, "status": "-" }, { "accession": "GCA_001048675.1", "gtdb_species": "s__Vibrio diabolicus", "ani": 78.6303, "matched_fragments": 187, "total_fragments": 1244, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.98", "min_intra_species_ani": "97.44", "mean_intra_species_af": "0.93", "min_intra_species_af": "0.90", "num_clustered_genomes": 43, "status": "-" }, { "accession": "GCF_000967545.1", "gtdb_species": "s__Vibrio galatheae", "ani": 78.6087, "matched_fragments": 163, "total_fragments": 1244, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001989995.2", "gtdb_species": "s__Vibrio anguillarum", "ani": 78.5231, "matched_fragments": 198, "total_fragments": 1244, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 96.3484, "mean_intra_species_ani": "98.39", "min_intra_species_ani": "98.01", "mean_intra_species_af": "0.89", "min_intra_species_af": "0.80", "num_clustered_genomes": 121, "status": "-" }, { "accession": "GCF_900107935.1", "gtdb_species": "s__Vibrio hangzhouensis", "ani": 78.4874, "matched_fragments": 141, "total_fragments": 1244, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000417905.1", "gtdb_species": "s__Vibrio natriegens", "ani": 78.3077, "matched_fragments": 184, "total_fragments": 1244, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.60", "min_intra_species_ani": "95.57", "mean_intra_species_af": "0.95", "min_intra_species_af": "0.90", "num_clustered_genomes": 11, "status": "-" }, { "accession": "GCF_005281815.1", "gtdb_species": "s__Vibrio chagasii", "ani": 78.0148, "matched_fragments": 179, "total_fragments": 1244, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "96.30", "min_intra_species_ani": "95.30", "mean_intra_species_af": "0.86", "min_intra_species_af": "0.82", "num_clustered_genomes": 10, "status": "-" } ] }