{
    "type": "genome",
    "identifier": "GCF_024347075.1",
    "organism": "Vibrio rarus",
    "title": "Vibrio rarus",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "Laboratory of Microbiology, Division of Marine Life Science, Faculty of Fisheries Sciences, Hokkaido University",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_024347075.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMD00393694",
        "wgs_master": "na",
        "refseq_category": "reference genome",
        "taxid": "413403",
        "species_taxid": "413403",
        "organism_name": "Vibrio rarus",
        "infraspecific_name": "strain=LMG 23674",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Complete Genome",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/07/13",
        "asm_name": "ASM2434707v1",
        "asm_submitter": "Laboratory of Microbiology, Division of Marine Life Science, Faculty of Fisheries Sciences, Hokkaido University",
        "gbrs_paired_asm": "GCA_024347075.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/024/347/075/GCF_024347075.1_ASM2434707v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "3877193",
        "genome_size_ungapped": "3877193",
        "gc_percent": "43.000000",
        "replicon_count": "3",
        "scaffold_count": "3",
        "contig_count": "3",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_024347075.1-RS_2024_10_11",
        "annotation_date": "2024-10-11",
        "total_gene_count": "3504",
        "protein_coding_gene_count": "3280",
        "non_coding_gene_count": "140",
        "pubmed_id": "34905112"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-07-13",
    "dateModified": "2022-07-13",
    "datePublished": "2022-07-13",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Vibrio rarus"
        ],
        "sample_taxid": [
            "413403"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "US:La Jolla"
        ],
        "sample_host_location_id": [],
        "data_size": "1.095 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
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    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "3877193",
        "Number of Sequences": "3",
        "Longest Sequences (bp)": "2846978",
        "N50 (bp)": "2846978",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "43.0",
        "Number of CDSs": "3375",
        "Average Protein Length": "325.0",
        "Coding Ratio (%)": "84.9",
        "Number of rRNAs": "31",
        "Number of tRNAs": "105",
        "Number of CRISPRs": "1"
    },
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                "relation_to_type": "type",
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                "status": "below_threshold"
            },
            {
                "organism_name": "Vibrio comitans",
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            },
            {
                "organism_name": "Vibrio neonatus",
                "strain": "strain=JCM 21521",
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                "species_taxid": 278860,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
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                "accession": "GCA_006538525.1",
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            },
            {
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            },
            {
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                "status": "below_threshold"
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            {
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Vibrio atlanticus",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Vibrio gallicus",
                "strain": "strain=CIP 107863",
                "accession": "GCA_024346875.1",
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                "ani": 80.4593,
                "matched_fragments": 301,
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                "status": "below_threshold"
            }
        ],
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        "gtdb_result": [
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                "accession": "GCF_001676025.1",
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}