{ "tc_result": [ { "organism_name": "Vibrio zhugei", "strain": "strain=KCTC 62784", "accession": "GCA_024347155.1", "taxid": 2479546, "species_taxid": 2479546, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 1336, "total_fragments": 1336, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Vibrio zhugei", "strain": "strain=HBUAS61001", "accession": "GCA_003716875.1", "taxid": 2479546, "species_taxid": 2479546, "relation_to_type": "type", "validated": true, "ani": 99.9963, "matched_fragments": 1333, "total_fragments": 1336, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Vibrio palustris", "strain": "strain=CECT 9027", "accession": "GCA_024346995.1", "taxid": 1918946, "species_taxid": 1918946, "relation_to_type": "type", "validated": true, "ani": 82.5429, "matched_fragments": 777, "total_fragments": 1336, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Vibrio palustris", "strain": "strain=CECT 9027", "accession": "GCA_900162645.1", "taxid": 1918946, "species_taxid": 1918946, "relation_to_type": "type", "validated": true, "ani": 82.3271, "matched_fragments": 768, "total_fragments": 1336, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Vibrio hippocampi", "strain": "strain=CECT 8226", "accession": "GCA_921292975.1", "taxid": 654686, "species_taxid": 654686, "relation_to_type": "type", "validated": true, "ani": 79.963, "matched_fragments": 173, "total_fragments": 1336, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Vibrio nitrifigilis", "strain": "strain=NFV-1", "accession": "GCA_015686695.1", "taxid": 2789781, "species_taxid": 2789781, "relation_to_type": "type", "validated": true, "ani": 79.8875, "matched_fragments": 341, "total_fragments": 1336, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Vibrio tritonius", "strain": "strain=JCM 16456", "accession": "GCA_001547935.1", "taxid": 1435069, "species_taxid": 1435069, "relation_to_type": "type", "validated": true, "ani": 79.7245, "matched_fragments": 341, "total_fragments": 1336, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Vibrio neonatus", "strain": "strain=JCM 21521", "accession": "GCA_024346975.1", "taxid": 278860, "species_taxid": 278860, "relation_to_type": "type", "validated": true, "ani": 79.7007, "matched_fragments": 137, "total_fragments": 1336, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Vibrio algicola", "strain": "strain=SM1977", "accession": "GCA_009601765.2", "taxid": 2662262, "species_taxid": 2662262, "relation_to_type": "type", "validated": true, "ani": 79.4216, "matched_fragments": 141, "total_fragments": 1336, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Vibrio hangzhouensis", "strain": "strain=CGMCC 1.7062", "accession": "GCA_900107935.1", "taxid": 462991, "species_taxid": 462991, "relation_to_type": "type", "validated": true, "ani": 78.8941, "matched_fragments": 150, "total_fragments": 1336, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Vibrio renipiscarius", "strain": "strain=DCR 1-4-2", "accession": "GCA_000827885.1", "taxid": 1461322, "species_taxid": 1461322, "relation_to_type": "type", "validated": true, "ani": 78.2984, "matched_fragments": 177, "total_fragments": 1336, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_003716875.1", "gtdb_species": "s__Vibrio zhugei", "ani": 99.9963, "matched_fragments": 1333, "total_fragments": 1336, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "conclusive" }, { "accession": "GCF_900162645.1", "gtdb_species": "s__Vibrio palustris", "ani": 82.3428, "matched_fragments": 767, "total_fragments": 1336, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_002563795.1", "gtdb_species": "s__Vibrio sp002563795", "ani": 80.3058, "matched_fragments": 190, "total_fragments": 1336, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_015686695.1", "gtdb_species": "s__Vibrio nitrifigilis", "ani": 79.8641, "matched_fragments": 339, "total_fragments": 1336, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.79", "min_intra_species_ani": "98.79", "mean_intra_species_af": "0.95", "min_intra_species_af": "0.95", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_001547935.1", "gtdb_species": "s__Vibrio tritonius", "ani": 79.6345, "matched_fragments": 339, "total_fragments": 1336, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_002163755.1", "gtdb_species": "s__Vibrio campbellii", "ani": 79.6081, "matched_fragments": 182, "total_fragments": 1336, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "96.60", "min_intra_species_ani": "95.95", "mean_intra_species_af": "0.87", "min_intra_species_af": "0.77", "num_clustered_genomes": 78, "status": "-" }, { "accession": "GCF_019226825.1", "gtdb_species": "s__Vibrio sp004804295", "ani": 79.3748, "matched_fragments": 240, "total_fragments": 1336, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.23", "min_intra_species_ani": "99.23", "mean_intra_species_af": "0.93", "min_intra_species_af": "0.93", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_000354175.2", "gtdb_species": "s__Vibrio alginolyticus", "ani": 79.296, "matched_fragments": 189, "total_fragments": 1336, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.52", "min_intra_species_ani": "98.30", "mean_intra_species_af": "0.93", "min_intra_species_af": "0.90", "num_clustered_genomes": 169, "status": "-" }, { "accession": "GCF_000176155.1", "gtdb_species": "s__Vibrio metschnikovii", "ani": 79.2005, "matched_fragments": 212, "total_fragments": 1336, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.65", "min_intra_species_ani": "97.32", "mean_intra_species_af": "0.91", "min_intra_species_af": "0.86", "num_clustered_genomes": 50, "status": "-" }, { "accession": "GCF_009665255.1", "gtdb_species": "s__Vibrio metoecus_B", "ani": 79.153, "matched_fragments": 225, "total_fragments": 1336, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.11", "min_intra_species_ani": "98.11", "mean_intra_species_af": "0.94", "min_intra_species_af": "0.94", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_900107935.1", "gtdb_species": "s__Vibrio hangzhouensis", "ani": 78.8796, "matched_fragments": 148, "total_fragments": 1336, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000467125.1", "gtdb_species": "s__Vibrio proteolyticus", "ani": 78.7795, "matched_fragments": 182, "total_fragments": 1336, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.93", "min_intra_species_ani": "98.89", "mean_intra_species_af": "0.93", "min_intra_species_af": "0.91", "num_clustered_genomes": 5, "status": "-" }, { "accession": "GCF_000189275.1", "gtdb_species": "s__Vibrio sinaloensis_B", "ani": 78.7778, "matched_fragments": 162, "total_fragments": 1336, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000740015.1", "gtdb_species": "s__Vibrio diazotrophicus", "ani": 78.7397, "matched_fragments": 231, "total_fragments": 1336, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.42", "min_intra_species_ani": "96.82", "mean_intra_species_af": "0.87", "min_intra_species_af": "0.85", "num_clustered_genomes": 7, "status": "-" }, { "accession": "GCF_013041605.1", "gtdb_species": "s__Vibrio plantisponsor", "ani": 78.6704, "matched_fragments": 229, "total_fragments": 1336, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.35", "min_intra_species_ani": "98.35", "mean_intra_species_af": "0.93", "min_intra_species_af": "0.93", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_001048675.1", "gtdb_species": "s__Vibrio diabolicus", "ani": 78.6704, "matched_fragments": 186, "total_fragments": 1336, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.98", "min_intra_species_ani": "97.44", "mean_intra_species_af": "0.93", "min_intra_species_af": "0.90", "num_clustered_genomes": 43, "status": "-" }, { "accession": "GCF_002741985.1", "gtdb_species": "s__Vibrio rotiferianus", "ani": 78.5717, "matched_fragments": 184, "total_fragments": 1336, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.35", "min_intra_species_ani": "95.73", "mean_intra_species_af": "0.89", "min_intra_species_af": "0.85", "num_clustered_genomes": 14, "status": "-" }, { "accession": "GCF_001591145.1", "gtdb_species": "s__Vibrio harveyi", "ani": 78.5395, "matched_fragments": 156, "total_fragments": 1336, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.80", "min_intra_species_ani": "98.53", "mean_intra_species_af": "0.95", "min_intra_species_af": "0.89", "num_clustered_genomes": 41, "status": "-" }, { "accession": "GCF_000827885.1", "gtdb_species": "s__Vibrio renipiscarius", "ani": 78.3615, "matched_fragments": 179, "total_fragments": 1336, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.99", "min_intra_species_ani": "99.99", "mean_intra_species_af": "0.99", "min_intra_species_af": "0.99", "num_clustered_genomes": 2, "status": "-" } ] }