{ "tc_result": [ { "organism_name": "Vibrio gallaecicus", "strain": "strain=CECT 7244", "accession": "GCA_024347495.1", "taxid": 552386, "species_taxid": 552386, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 1697, "total_fragments": 1708, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Vibrio gallaecicus", "strain": "strain=VB 8.9", "accession": "GCA_013416885.1", "taxid": 552386, "species_taxid": 552386, "relation_to_type": "type", "validated": true, "ani": 99.9682, "matched_fragments": 1640, "total_fragments": 1708, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Vibrio gallaecicus", "strain": "strain=DSM 23502", "accession": "GCA_005281825.1", "taxid": 552386, "species_taxid": 552386, "relation_to_type": "type", "validated": true, "ani": 99.9682, "matched_fragments": 1640, "total_fragments": 1708, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Vibrio tasmaniensis", "strain": "strain=LMG 20012", "accession": "GCA_024347635.1", "taxid": 212663, "species_taxid": 212663, "relation_to_type": "suspected-type", "validated": true, "ani": 83.5137, "matched_fragments": 755, "total_fragments": 1708, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Vibrio bathopelagicus", "strain": "strain=Sal10", "accession": "GCA_014879975.1", "taxid": 2777577, "species_taxid": 2777577, "relation_to_type": "type", "validated": true, "ani": 83.4867, "matched_fragments": 773, "total_fragments": 1708, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Vibrio crassostreae", "strain": "strain=LMG 22240", "accession": "GCA_024347415.1", "taxid": 246167, "species_taxid": 246167, "relation_to_type": "type", "validated": true, "ani": 83.385, "matched_fragments": 771, "total_fragments": 1708, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Vibrio atlanticus", "strain": "strain=CECT 7223", "accession": "GCA_024347315.1", "taxid": 693153, "species_taxid": 693153, "relation_to_type": "type", "validated": true, "ani": 83.3759, "matched_fragments": 768, "total_fragments": 1708, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Vibrio celticus", "strain": "strain=CECT 7224", "accession": "GCA_024347335.1", "taxid": 446372, "species_taxid": 446372, "relation_to_type": "type", "validated": true, "ani": 83.2333, "matched_fragments": 785, "total_fragments": 1708, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Vibrio pomeroyi", "strain": "strain=LMG 20537", "accession": "GCA_024347595.1", "taxid": 198832, "species_taxid": 198832, "relation_to_type": "type", "validated": true, "ani": 83.2006, "matched_fragments": 783, "total_fragments": 1708, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Vibrio cyclitrophicus", "strain": "strain=LMG 21359", "accession": "GCA_024347435.1", "taxid": 47951, "species_taxid": 47951, "relation_to_type": "type", "validated": true, "ani": 83.1206, "matched_fragments": 779, "total_fragments": 1708, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Vibrio kanaloae", "strain": "strain=LMG 20539", "accession": "GCA_024347535.1", "taxid": 170673, "species_taxid": 170673, "relation_to_type": "type", "validated": true, "ani": 82.863, "matched_fragments": 748, "total_fragments": 1708, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Vibrio echinoideorum", "strain": "strain=NFH.MB010", "accession": "GCA_004764665.1", "taxid": 2100116, "species_taxid": 2100116, "relation_to_type": "type", "validated": true, "ani": 82.7964, "matched_fragments": 767, "total_fragments": 1708, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Vibrio gigantis", "strain": "strain=LGP 13", "accession": "GCA_002156475.1", "taxid": 296199, "species_taxid": 296199, "relation_to_type": "type", "validated": true, "ani": 82.7647, "matched_fragments": 761, "total_fragments": 1708, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Vibrio kanaloae", "strain": "strain=CCUG 56968", "accession": "GCA_008801285.1", "taxid": 170673, "species_taxid": 170673, "relation_to_type": "type", "validated": true, "ani": 82.6927, "matched_fragments": 713, "total_fragments": 1708, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Vibrio toranzoniae", "strain": "strain=CECT 7225", "accession": "GCA_900089765.1", "taxid": 1194427, "species_taxid": 1194427, "relation_to_type": "type", "validated": true, "ani": 82.6884, "matched_fragments": 719, "total_fragments": 1708, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Vibrio pelagius", "strain": "strain=ATCC 25916", "accession": "GCA_024347575.1", "taxid": 28169, "species_taxid": 28169, "relation_to_type": "type", "validated": true, "ani": 81.6694, "matched_fragments": 661, "total_fragments": 1708, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Vibrio profundi", "strain": "strain=TP187", "accession": "GCA_005281835.1", "taxid": 1774960, "species_taxid": 1774960, "relation_to_type": "type", "validated": true, "ani": 81.6508, "matched_fragments": 667, "total_fragments": 1708, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_005281825.1", "gtdb_species": "s__Vibrio gallaecicus", "ani": 99.9682, "matched_fragments": 1640, "total_fragments": 1708, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "conclusive" }, { "accession": "GCF_013114625.1", "gtdb_species": "s__Vibrio sp013114625", "ani": 91.341, "matched_fragments": 1379, "total_fragments": 1708, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_014879975.1", "gtdb_species": "s__Vibrio bathopelagicus", "ani": 83.5255, "matched_fragments": 776, "total_fragments": 1708, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_002875945.1", "gtdb_species": "s__Vibrio lentus_A", "ani": 83.2329, "matched_fragments": 742, "total_fragments": 1708, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_013394185.1", "gtdb_species": "s__Vibrio sp013394185", "ani": 83.2121, "matched_fragments": 772, "total_fragments": 1708, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "0.99", "min_intra_species_af": "0.99", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_014878155.1", "gtdb_species": "s__Vibrio lentus", "ani": 83.2111, "matched_fragments": 757, "total_fragments": 1708, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "96.60", "min_intra_species_ani": "95.56", "mean_intra_species_af": "0.86", "min_intra_species_af": "0.83", "num_clustered_genomes": 91, "status": "-" }, { "accession": "GCF_006333845.1", "gtdb_species": "s__Vibrio tasmaniensis", "ani": 83.0734, "matched_fragments": 725, "total_fragments": 1708, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "95.02", "min_intra_species_ani": "95.02", "mean_intra_species_af": "0.87", "min_intra_species_af": "0.87", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_001557875.1", "gtdb_species": "s__Vibrio splendidus_F", "ani": 83.0584, "matched_fragments": 762, "total_fragments": 1708, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.50", "min_intra_species_ani": "97.50", "mean_intra_species_af": "0.93", "min_intra_species_af": "0.93", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_000272045.2", "gtdb_species": "s__Vibrio crassostreae_C", "ani": 83.0198, "matched_fragments": 771, "total_fragments": 1708, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.007, "mean_intra_species_ani": "97.54", "min_intra_species_ani": "97.16", "mean_intra_species_af": "0.89", "min_intra_species_af": "0.87", "num_clustered_genomes": 25, "status": "-" }, { "accession": "GCF_002875705.1", "gtdb_species": "s__Vibrio sp002875705", "ani": 82.9277, "matched_fragments": 701, "total_fragments": 1708, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.93", "min_intra_species_ani": "99.66", "mean_intra_species_af": "0.96", "min_intra_species_af": "0.93", "num_clustered_genomes": 9, "status": "-" }, { "accession": "GCF_002156525.1", "gtdb_species": "s__Vibrio celticus", "ani": 82.9215, "matched_fragments": 749, "total_fragments": 1708, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.2787, "mean_intra_species_ani": "99.99", "min_intra_species_ani": "99.99", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_007858795.1", "gtdb_species": "s__Vibrio sp007858795", "ani": 82.9166, "matched_fragments": 760, "total_fragments": 1708, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000272405.2", "gtdb_species": "s__Vibrio tasmaniensis_A", "ani": 82.9049, "matched_fragments": 712, "total_fragments": 1708, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 96.5791, "mean_intra_species_ani": "97.23", "min_intra_species_ani": "97.01", "mean_intra_species_af": "0.87", "min_intra_species_af": "0.85", "num_clustered_genomes": 20, "status": "-" }, { "accession": "GCF_000316985.1", "gtdb_species": "s__Vibrio sp000316985", "ani": 82.892, "matched_fragments": 697, "total_fragments": 1708, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000272105.2", "gtdb_species": "s__Vibrio splendidus_I", "ani": 82.8592, "matched_fragments": 719, "total_fragments": 1708, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_004764665.1", "gtdb_species": "s__Vibrio echinoideorum", "ani": 82.765, "matched_fragments": 769, "total_fragments": 1708, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.40", "min_intra_species_ani": "96.83", "mean_intra_species_af": "0.88", "min_intra_species_af": "0.82", "num_clustered_genomes": 5, "status": "-" }, { "accession": "GCF_002156475.1", "gtdb_species": "s__Vibrio gigantis", "ani": 82.7431, "matched_fragments": 763, "total_fragments": 1708, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.72", "min_intra_species_ani": "97.43", "mean_intra_species_af": "0.95", "min_intra_species_af": "0.90", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_008801285.1", "gtdb_species": "s__Vibrio kanaloae", "ani": 82.6906, "matched_fragments": 713, "total_fragments": 1708, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.372, "mean_intra_species_ani": "98.50", "min_intra_species_ani": "98.26", "mean_intra_species_af": "0.91", "min_intra_species_af": "0.88", "num_clustered_genomes": 16, "status": "-" }, { "accession": "GCF_002954585.1", "gtdb_species": "s__Vibrio chagasii_A", "ani": 82.4053, "matched_fragments": 708, "total_fragments": 1708, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "96.42", "min_intra_species_ani": "95.44", "mean_intra_species_af": "0.90", "min_intra_species_af": "0.87", "num_clustered_genomes": 4, "status": "-" }, { "accession": "GCF_001635455.1", "gtdb_species": "s__Vibrio sp001635455", "ani": 82.0954, "matched_fragments": 683, "total_fragments": 1708, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_005281835.1", "gtdb_species": "s__Vibrio profundi", "ani": 81.6485, "matched_fragments": 666, "total_fragments": 1708, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }