{ "tc_result": [ { "organism_name": "Vibrio kanaloae", "strain": "strain=LMG 20539", "accession": "GCA_024347535.1", "taxid": 170673, "species_taxid": 170673, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 1543, "total_fragments": 1550, "ani_threshold": 95, "status": "inconclusive" }, { "organism_name": "Vibrio kanaloae", "strain": "strain=CCUG 56968", "accession": "GCA_008801285.1", "taxid": 170673, "species_taxid": 170673, "relation_to_type": "type", "validated": true, "ani": 99.9875, "matched_fragments": 1506, "total_fragments": 1550, "ani_threshold": 95, "status": "inconclusive" }, { "organism_name": "Vibrio toranzoniae", "strain": "strain=CECT 7225", "accession": "GCA_024347655.1", "taxid": 1194427, "species_taxid": 1194427, "relation_to_type": "type", "validated": true, "ani": 95.4744, "matched_fragments": 1357, "total_fragments": 1550, "ani_threshold": 95, "status": "inconclusive" }, { "organism_name": "Vibrio toranzoniae", "strain": "strain=Vb 10.8", "accession": "GCA_001541335.1", "taxid": 1194427, "species_taxid": 1194427, "relation_to_type": "type", "validated": true, "ani": 95.3807, "matched_fragments": 1337, "total_fragments": 1550, "ani_threshold": 95, "status": "inconclusive" }, { "organism_name": "Vibrio toranzoniae", "strain": "strain=CECT 7225", "accession": "GCA_900089765.1", "taxid": 1194427, "species_taxid": 1194427, "relation_to_type": "type", "validated": true, "ani": 95.3608, "matched_fragments": 1354, "total_fragments": 1550, "ani_threshold": 95, "status": "inconclusive" }, { "organism_name": "Vibrio coralliirubri", "strain": "strain=Corallo1", "accession": "GCA_002156455.1", "taxid": 1516159, "species_taxid": 1516159, "relation_to_type": "type", "validated": true, "ani": 89.7862, "matched_fragments": 1209, "total_fragments": 1550, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Vibrio coralliirubri", "strain": "strain=DSM 27495", "accession": "GCA_024347375.1", "taxid": 1516159, "species_taxid": 1516159, "relation_to_type": "type", "validated": true, "ani": 89.748, "matched_fragments": 1271, "total_fragments": 1550, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Vibrio celticus", "strain": "strain=CECT 7224", "accession": "GCA_024347335.1", "taxid": 446372, "species_taxid": 446372, "relation_to_type": "type", "validated": true, "ani": 89.678, "matched_fragments": 1264, "total_fragments": 1550, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Vibrio pomeroyi", "strain": "strain=LMG 20537", "accession": "GCA_024347595.1", "taxid": 198832, "species_taxid": 198832, "relation_to_type": "type", "validated": true, "ani": 88.7779, "matched_fragments": 1299, "total_fragments": 1550, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Vibrio gigantis", "strain": "strain=LMG 22741", "accession": "GCA_024347515.1", "taxid": 296199, "species_taxid": 296199, "relation_to_type": "type", "validated": true, "ani": 88.1813, "matched_fragments": 1230, "total_fragments": 1550, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Vibrio gallaecicus", "strain": "strain=VB 8.9", "accession": "GCA_013416885.1", "taxid": 552386, "species_taxid": 552386, "relation_to_type": "type", "validated": true, "ani": 82.7142, "matched_fragments": 710, "total_fragments": 1550, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_008801285.1", "gtdb_species": "s__Vibrio kanaloae", "ani": 99.9875, "matched_fragments": 1506, "total_fragments": 1550, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.372, "mean_intra_species_ani": "98.50", "min_intra_species_ani": "98.26", "mean_intra_species_af": "0.91", "min_intra_species_af": "0.88", "num_clustered_genomes": 16, "status": "conclusive" }, { "accession": "GCF_900089765.1", "gtdb_species": "s__Vibrio toranzoniae", "ani": 95.3703, "matched_fragments": 1353, "total_fragments": 1550, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.372, "mean_intra_species_ani": "98.37", "min_intra_species_ani": "97.69", "mean_intra_species_af": "0.93", "min_intra_species_af": "0.89", "num_clustered_genomes": 7, "status": "-" }, { "accession": "GCF_002156455.1", "gtdb_species": "s__Vibrio coralliirubri", "ani": 89.7862, "matched_fragments": 1209, "total_fragments": 1550, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.2787, "mean_intra_species_ani": "96.55", "min_intra_species_ani": "95.77", "mean_intra_species_af": "0.88", "min_intra_species_af": "0.83", "num_clustered_genomes": 22, "status": "-" }, { "accession": "GCF_002156525.1", "gtdb_species": "s__Vibrio celticus", "ani": 89.6145, "matched_fragments": 1197, "total_fragments": 1550, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.2787, "mean_intra_species_ani": "99.99", "min_intra_species_ani": "99.99", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_000272045.2", "gtdb_species": "s__Vibrio crassostreae_C", "ani": 89.5972, "matched_fragments": 1244, "total_fragments": 1550, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.007, "mean_intra_species_ani": "97.54", "min_intra_species_ani": "97.16", "mean_intra_species_af": "0.89", "min_intra_species_af": "0.87", "num_clustered_genomes": 25, "status": "-" }, { "accession": "GCF_000272105.2", "gtdb_species": "s__Vibrio splendidus_I", "ani": 89.2463, "matched_fragments": 1208, "total_fragments": 1550, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_013394185.1", "gtdb_species": "s__Vibrio sp013394185", "ani": 88.9312, "matched_fragments": 1252, "total_fragments": 1550, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "0.99", "min_intra_species_af": "0.99", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_001048535.1", "gtdb_species": "s__Vibrio crassostreae", "ani": 88.9083, "matched_fragments": 1249, "total_fragments": 1550, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.86", "min_intra_species_ani": "96.20", "mean_intra_species_af": "0.91", "min_intra_species_af": "0.83", "num_clustered_genomes": 177, "status": "-" }, { "accession": "GCF_007858795.1", "gtdb_species": "s__Vibrio sp007858795", "ani": 88.6317, "matched_fragments": 1244, "total_fragments": 1550, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000316985.1", "gtdb_species": "s__Vibrio sp000316985", "ani": 88.577, "matched_fragments": 1153, "total_fragments": 1550, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_002875705.1", "gtdb_species": "s__Vibrio sp002875705", "ani": 88.2683, "matched_fragments": 1193, "total_fragments": 1550, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.93", "min_intra_species_ani": "99.66", "mean_intra_species_af": "0.96", "min_intra_species_af": "0.93", "num_clustered_genomes": 9, "status": "-" }, { "accession": "GCF_014878155.1", "gtdb_species": "s__Vibrio lentus", "ani": 88.2004, "matched_fragments": 1232, "total_fragments": 1550, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "96.60", "min_intra_species_ani": "95.56", "mean_intra_species_af": "0.86", "min_intra_species_af": "0.83", "num_clustered_genomes": 91, "status": "-" }, { "accession": "GCF_000272405.2", "gtdb_species": "s__Vibrio tasmaniensis_A", "ani": 88.0724, "matched_fragments": 1101, "total_fragments": 1550, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 96.5791, "mean_intra_species_ani": "97.23", "min_intra_species_ani": "97.01", "mean_intra_species_af": "0.87", "min_intra_species_af": "0.85", "num_clustered_genomes": 20, "status": "-" }, { "accession": "GCF_002156475.1", "gtdb_species": "s__Vibrio gigantis", "ani": 88.0574, "matched_fragments": 1219, "total_fragments": 1550, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.72", "min_intra_species_ani": "97.43", "mean_intra_species_af": "0.95", "min_intra_species_af": "0.90", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_900089855.1", "gtdb_species": "s__Vibrio atlanticus", "ani": 88.0297, "matched_fragments": 1184, "total_fragments": 1550, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 96.5791, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_014879975.1", "gtdb_species": "s__Vibrio bathopelagicus", "ani": 87.86, "matched_fragments": 1278, "total_fragments": 1550, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }