{ "tc_result": [ { "organism_name": "[Pseudomonas] zhaodongensis", "strain": "strain=DSM 27559T", "accession": "GCA_024448735.1", "taxid": 1176257, "species_taxid": 1176257, "relation_to_type": "suspected-type", "validated": true, "ani": 100.0, "matched_fragments": 1537, "total_fragments": 1539, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "[Pseudomonas] zhaodongensis", "strain": "strain=NEAU-ST5-21", "accession": "GCA_003696365.1", "taxid": 1176257, "species_taxid": 1176257, "relation_to_type": "suspected-type", "validated": true, "ani": 99.9954, "matched_fragments": 1533, "total_fragments": 1539, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Stutzerimonas xanthomarina", "strain": "strain=DSM 18231", "accession": "GCA_900129835.1", "taxid": 271420, "species_taxid": 271420, "relation_to_type": "suspected-type", "validated": true, "ani": 82.3159, "matched_fragments": 964, "total_fragments": 1539, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Stutzerimonas xanthomarina", "strain": "strain=DSM 18231", "accession": "GCA_024328335.1", "taxid": 271420, "species_taxid": 271420, "relation_to_type": "suspected-type", "validated": true, "ani": 82.212, "matched_fragments": 983, "total_fragments": 1539, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Stutzerimonas stutzeri", "strain": "strain=FDAARGOS_875", "accession": "GCA_016028655.1", "taxid": 316, "species_taxid": 316, "relation_to_type": "type", "validated": true, "ani": 80.8851, "matched_fragments": 808, "total_fragments": 1539, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Stutzerimonas kunmingensis", "strain": "strain=DSM 25974", "accession": "GCA_024397575.1", "taxid": 1211807, "species_taxid": 1211807, "relation_to_type": "type", "validated": true, "ani": 80.8537, "matched_fragments": 803, "total_fragments": 1539, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Stutzerimonas stutzeri", "strain": "strain=CGMCC 1.1803", "accession": "GCA_000219605.1", "taxid": 316, "species_taxid": 316, "relation_to_type": "type", "validated": true, "ani": 80.843, "matched_fragments": 809, "total_fragments": 1539, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas nitrititolerans", "strain": "strain=GL14", "accession": "GCA_003696285.1", "taxid": 2482751, "species_taxid": 2482751, "relation_to_type": "type", "validated": true, "ani": 80.7155, "matched_fragments": 806, "total_fragments": 1539, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Stutzerimonas frequens", "strain": "strain=DNSP21", "accession": "GCA_002890935.1", "taxid": 2968969, "species_taxid": 2968969, "relation_to_type": "type", "validated": true, "ani": 80.7075, "matched_fragments": 821, "total_fragments": 1539, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "[Pseudomonas] nosocomialis", "strain": "strain=A31/70", "accession": "GCA_005876855.1", "taxid": 1056496, "species_taxid": 1056496, "relation_to_type": "type", "validated": true, "ani": 80.0995, "matched_fragments": 741, "total_fragments": 1539, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas mangrovi", "strain": "strain=TC11", "accession": "GCA_003052585.1", "taxid": 2161748, "species_taxid": 2161748, "relation_to_type": "type", "validated": true, "ani": 79.0687, "matched_fragments": 451, "total_fragments": 1539, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas kuykendallii", "strain": "strain=NRRL B-59562", "accession": "GCA_900106975.1", "taxid": 1007099, "species_taxid": 1007099, "relation_to_type": "type", "validated": true, "ani": 78.8775, "matched_fragments": 511, "total_fragments": 1539, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_003696365.1", "gtdb_species": "s__Pseudomonas_A zhaodongensis", "ani": 99.9954, "matched_fragments": 1533, "total_fragments": 1539, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "conclusive" }, { "accession": "GCA_002476945.1", "gtdb_species": "s__Pseudomonas_A stutzeri_Q", "ani": 85.5867, "matched_fragments": 1309, "total_fragments": 1539, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_002452485.1", "gtdb_species": "s__Pseudomonas_A stutzeri_P", "ani": 82.5661, "matched_fragments": 981, "total_fragments": 1539, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_004010935.1", "gtdb_species": "s__Pseudomonas_A sp004010935", "ani": 82.5594, "matched_fragments": 1053, "total_fragments": 1539, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "96.94", "min_intra_species_ani": "95.82", "mean_intra_species_af": "0.92", "min_intra_species_af": "0.89", "num_clustered_genomes": 15, "status": "-" }, { "accession": "GCF_900129835.1", "gtdb_species": "s__Pseudomonas_A xanthomarina", "ani": 82.3116, "matched_fragments": 964, "total_fragments": 1539, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_018138085.1", "gtdb_species": "s__Pseudomonas_A stutzeri_AI", "ani": 82.1421, "matched_fragments": 1041, "total_fragments": 1539, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.15", "min_intra_species_ani": "96.92", "mean_intra_species_af": "0.90", "min_intra_species_af": "0.86", "num_clustered_genomes": 5, "status": "-" }, { "accession": "GCF_000952685.1", "gtdb_species": "s__Pseudomonas_A stutzeri_E", "ani": 82.1285, "matched_fragments": 1066, "total_fragments": 1539, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000590475.1", "gtdb_species": "s__Pseudomonas_A stutzeri_D", "ani": 82.126, "matched_fragments": 1005, "total_fragments": 1539, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_002890895.1", "gtdb_species": "s__Pseudomonas_A stutzeri_AB", "ani": 82.1147, "matched_fragments": 1035, "total_fragments": 1539, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.17", "min_intra_species_ani": "97.01", "mean_intra_species_af": "0.91", "min_intra_species_af": "0.85", "num_clustered_genomes": 18, "status": "-" }, { "accession": "GCF_003325755.1", "gtdb_species": "s__Pseudomonas_A sp003325755", "ani": 82.0554, "matched_fragments": 998, "total_fragments": 1539, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_003527165.1", "gtdb_species": "s__Pseudomonas_A sp003527165", "ani": 81.9658, "matched_fragments": 559, "total_fragments": 1539, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_002339675.1", "gtdb_species": "s__Pseudomonas_A stutzeri_O", "ani": 81.8169, "matched_fragments": 946, "total_fragments": 1539, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_002387205.1", "gtdb_species": "s__Pseudomonas_A stutzeri_N", "ani": 81.8143, "matched_fragments": 948, "total_fragments": 1539, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.23", "min_intra_species_ani": "98.23", "mean_intra_species_af": "0.88", "min_intra_species_af": "0.88", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_009789555.1", "gtdb_species": "s__Pseudomonas_A stutzeri_R", "ani": 81.7968, "matched_fragments": 923, "total_fragments": 1539, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.81", "min_intra_species_ani": "99.81", "mean_intra_species_af": "0.96", "min_intra_species_af": "0.96", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_005876855.1", "gtdb_species": "s__Pseudomonas_R nosocomialis", "ani": 80.08, "matched_fragments": 744, "total_fragments": 1539, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_R", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.98", "min_intra_species_ani": "98.95", "mean_intra_species_af": "0.91", "min_intra_species_af": "0.90", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCA_900766265.1", "gtdb_species": "s__Pseudomonas_R sp900766265", "ani": 79.8678, "matched_fragments": 689, "total_fragments": 1539, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_R", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_013522725.1", "gtdb_species": "s__Pseudomonas_R azotifigens_A", "ani": 79.8093, "matched_fragments": 695, "total_fragments": 1539, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_R", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }