{
    "type": "genome",
    "identifier": "GCF_024584145.1",
    "organism": "Aliarcobacter butzleri",
    "title": "Aliarcobacter butzleri",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "Ghent University",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_024584145.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN25938060",
        "wgs_master": "JANJGJ000000000.1",
        "refseq_category": "na",
        "taxid": "28197",
        "species_taxid": "28197",
        "organism_name": "Aliarcobacter butzleri",
        "infraspecific_name": "strain=LMG 10828",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/08/07",
        "asm_name": "ASM2458414v1",
        "asm_submitter": "Ghent University",
        "gbrs_paired_asm": "GCA_024584145.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/024/584/145/GCF_024584145.1_ASM2458414v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "2298450",
        "genome_size_ungapped": "2298450",
        "gc_percent": "27.000000",
        "replicon_count": "0",
        "scaffold_count": "27",
        "contig_count": "27",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_024584145.1-RS_2024_08_22",
        "annotation_date": "2024-08-22",
        "total_gene_count": "2319",
        "protein_coding_gene_count": "2254",
        "non_coding_gene_count": "50",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-08-07",
    "dateModified": "2022-08-07",
    "datePublished": "2022-08-07",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Aliarcobacter butzleri"
        ],
        "sample_taxid": [
            "28197"
        ],
        "sample_host_organism": [
            "Homo sapiens"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "USA"
        ],
        "sample_host_location_id": [],
        "data_size": "0.614 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "2298450",
        "Number of Sequences": "27",
        "Longest Sequences (bp)": "376771",
        "N50 (bp)": "234980",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "26.9",
        "Number of CDSs": "2251",
        "Average Protein Length": "317.8",
        "Coding Ratio (%)": "93.4",
        "Number of rRNAs": "2",
        "Number of tRNAs": "46",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Aliarcobacter butzleri",
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                "relation_to_type": "type",
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            },
            {
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                "relation_to_type": "type",
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                "status": "conclusive"
            },
            {
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            },
            {
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                "accession": "GCA_003544915.1",
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                "species_taxid": 913109,
                "relation_to_type": "type",
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                "total_fragments": 752,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Arcobacter ellisii",
                "strain": "strain=CECT 7837",
                "accession": "GCA_004115815.1",
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                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Arcobacter defluvii",
                "strain": "strain=CECT 7697",
                "accession": "GCA_004115775.1",
                "taxid": 873191,
                "species_taxid": 873191,
                "relation_to_type": "type",
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                "ani_threshold": 95,
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            },
            {
                "organism_name": "Arcobacter defluvii",
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                "accession": "GCA_013201725.1",
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                "relation_to_type": "type",
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                "matched_fragments": 545,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Arcobacter aquimarinus",
                "strain": "strain=W63",
                "accession": "GCA_013177635.1",
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                "species_taxid": 1315211,
                "relation_to_type": "type",
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            },
            {
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                "species_taxid": 1315211,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Arcobacter cloacae",
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                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Aliarcobacter vitoriensis",
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                "accession": "GCA_024583985.1",
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                "status": "below_threshold"
            },
            {
                "organism_name": "Aliarcobacter vitoriensis",
                "strain": "strain=CECT 9230",
                "accession": "GCA_003316695.1",
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                "relation_to_type": "type",
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                "ani": 82.7919,
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                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 100.0,
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                "accession": "GCF_900187115.1",
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                "mean_intra_species_ani": "N/A",
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    "_genome_taxon": [
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    "quality": 4,
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}