{ "type": "genome", "identifier": "GCF_024621935.1", "organism": "Stenotrophomonas muris", "title": "Stenotrophomonas muris", "description": "na", "data type": "Genome sequencing and assembly", "organization": "RWTH Aachen University Hospital", "publication": [ {} ], "properties": { "assembly_accession": "GCF_024621935.1", "bioproject": "PRJNA224116", "biosample": "SAMN29593166", "wgs_master": "JANKBX000000000.1", "refseq_category": "reference genome", "taxid": "2963283", "species_taxid": "2963283", "organism_name": "Stenotrophomonas muris", "infraspecific_name": "strain=DSM 28631", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2022/08/10", "asm_name": "ASM2462193v1", "asm_submitter": "RWTH Aachen University Hospital", "gbrs_paired_asm": "GCA_024621935.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/024/621/935/GCF_024621935.1_ASM2462193v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "4732967", "genome_size_ungapped": "4732967", "gc_percent": "66.500000", "replicon_count": "0", "scaffold_count": "33", "contig_count": "33", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_024621935.1-RS_2024_05_12", "annotation_date": "2024-05-12", "total_gene_count": "4400", "protein_coding_gene_count": "4282", "non_coding_gene_count": "70", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2022-08-10", "dateModified": "2022-08-10", "datePublished": "2022-08-10", "_annotation": { "sample_count": 1, "sample_organism": [ "Stenotrophomonas muris" ], "sample_taxid": [ "2963283" ], "sample_host_organism": [ "Mus musculus" ], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], 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"ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "[Pseudomonas] hibiscicola", "strain": "strain=ATCC 19867", "accession": "GCA_000382065.1", "taxid": 86189, "species_taxid": 86189, "relation_to_type": "type", "validated": true, "ani": 92.4718, "matched_fragments": 1262, "total_fragments": 1561, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Stenotrophomonas maltophilia", "strain": "strain=ATCC 13637", "accession": "GCA_001997185.1", "taxid": 40324, "species_taxid": 40324, "relation_to_type": "type", "validated": true, "ani": 92.4658, "matched_fragments": 1270, "total_fragments": 1561, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Stenotrophomonas maltophilia", "strain": "strain=NBRC 14161", "accession": "GCA_001591205.1", "taxid": 40324, "species_taxid": 40324, "relation_to_type": "type", "validated": true, "ani": 92.3964, "matched_fragments": 1276, "total_fragments": 1561, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Stenotrophomonas maltophilia", "strain": "strain=MTCC 434", "accession": "GCA_000597745.1", "taxid": 40324, "species_taxid": 40324, "relation_to_type": "type", "validated": true, "ani": 92.3541, "matched_fragments": 1197, "total_fragments": 1561, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Stenotrophomonas lactitubi", "strain": "strain=M15", "accession": "GCA_002803515.1", "taxid": 2045214, "species_taxid": 2045214, "relation_to_type": "type", "validated": true, "ani": 88.6461, "matched_fragments": 1273, "total_fragments": 1561, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Stenotrophomonas pennii", "strain": "strain=Sa5BUN4", "accession": "GCA_014836545.1", "taxid": 2762239, "species_taxid": 2762239, "relation_to_type": "type", "validated": true, "ani": 84.7121, "matched_fragments": 910, "total_fragments": 1561, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": 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