# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_40	LOCUS_00400	sequence1:40169..41098(-)	partial			WP_002286633.1	cell division protein FtsQ/DivIB	84.8	63.8	34.7
MGA_116	LOCUS_01150	sequence1:99718..100062(-)	frameshift,internal_stop_codon	99718..99720(-)	100027,100021	WP_002379047.1	DUF4822 domain-containing protein	92.1	32.9	52.3
MGA_232	LOCUS_02310	sequence1:207454..207930(+)	frameshift		207927	WP_001181867.1	amidohydrolase family protein	91.8	34.8	37.9
MGA_233	LOCUS_02320	sequence1:208082..208663(+)	frameshift		207918	WP_000219567.1	amidohydrolase family protein	97.4	45.3	36.5
MGA_238	LOCUS_02370	sequence1:211511..211717(+)	frameshift		211524	WP_011837226.1	NAD(P)-dependent oxidoreductase	92.6	30.1	44.4
MGA_249	LOCUS_02480	sequence1:224284..224805(-)	internal_stop_codon	224284..224286(-)		WP_048065023.1	AAA family ATPase	91.3	66.4	41.6
MGA_253	LOCUS_02520	sequence1:228486..229196(+)	partial			WP_013390224.1	acetolactate decarboxylase	92.4	74.1	41.7
MGA_263	LOCUS_02620	sequence1:236719..237054(-)	partial			WP_002355236.1	response regulator transcription factor	69.4	33.5	62.3
MGA_266	LOCUS_02650	sequence1:239829..240344(-)	frameshift,internal_stop_codon	239827..239829(-),239764..239766(-)	240501,240375	WP_002386205.1	lipoprotein	99.4	47.1	67.6
MGA_269	LOCUS_02680	sequence1:242007..242753(+)	partial			WP_009993515.1	serine acetyltransferase	79.8	68.1	58.1
MGA_277	LOCUS_02760	sequence1:250217..250639(+)	internal_stop_codon	250187..250189(+)		WP_003547298.1	GNAT family N-acetyltransferase	88.6	68.9	51.6
MGA_280	LOCUS_02790	sequence1:252715..254907(-)	partial			WP_004398589.1	PBP1A family penicillin-binding protein	84.9	64.9	26.4
MGA_285	LOCUS_02840	sequence1:257030..257356(-)	frameshift,internal_stop_codon	257384..257386(-)	257050	WP_003243926.1	para-nitrobenzyl esterase	91.7	20.0	43.4
MGA_305	LOCUS_03040	sequence1:277151..280303(-)	partial			WP_162225034.1	SpaA isopeptide-forming pilin-related protein	67.2	47.7	40.8
MGA_319	LOCUS_03180	sequence1:291002..291355(-)	partial			WP_013228548.1	MarR family transcriptional regulator	88.0	66.0	34.0
MGA_326	LOCUS_03250	sequence1:303295..304218(+)	partial			WP_003575983.1	restriction endonuclease	37.8	62.6	47.9
MGA_351	LOCUS_03500	sequence1:326057..327736(-)	partial			WP_002287350.1	patatin-like phospholipase family protein	75.1	74.7	33.7
MGA_371	LOCUS_03700	sequence1:348784..350109(-)	partial			WP_002287386.1	NlpC/P60 family protein	64.6	53.1	51.6
MGA_397	LOCUS_03900	sequence1:388205..388588(-)	partial			WP_002356257.1	septum formation initiator family protein	92.1	72.3	41.0
MGA_420	LOCUS_04130	sequence1:411295..411522(-)	frameshift,internal_stop_codon	411677..411679(-)	411574	WP_002303488.1	ArgE/DapE family deacylase	98.7	19.5	62.2
MGA_421	LOCUS_04140	sequence1:411677..411859(-)	frameshift,internal_stop_codon	411995..411997(-),411872..411874(-),411677..411679(-)	411577	WP_002303488.1	ArgE/DapE family deacylase	100.0	15.8	51.7
MGA_422	LOCUS_04150	sequence1:411995..412309(-)	frameshift,internal_stop_codon	411994..411996(-),411871..411873(-)	412332	WP_002303488.1	ArgE/DapE family deacylase	100.0	27.4	63.5
MGA_427	LOCUS_04200	sequence1:417270..420041(-)	partial			WP_002296199.1	Ig-like domain-containing protein	76.2	68.6	25.8
MGA_433	LOCUS_04260	sequence1:428897..431710(-)	partial			WP_010706701.1	autolysin	62.8	78.3	41.4
MGA_460	LOCUS_04530	sequence1:458369..460966(-)	partial			WP_000728765.1	staphylococcal protein A	23.2	56.2	38.7
MGA_463	LOCUS_04560	sequence1:463557..464108(-)	partial			WP_002321666.1	FMN-binding protein	97.8	56.3	54.1
MGA_470	LOCUS_04630	sequence1:470950..471354(-)	partial			WP_002385230.1	signal peptidase I	80.6	62.4	43.9
MGA_499	LOCUS_04920	sequence1:502060..502608(-)	partial			WP_010906223.1	helix-turn-helix transcriptional regulator	38.5	28.9	50.0
MGA_573	LOCUS_05600	sequence1:567223..567624(+)	frameshift		567597	WP_040531169.1	GNAT family N-acetyltransferase	94.0	76.4	48.8
MGA_599	LOCUS_05860	sequence1:597964..602442(+)	partial			WP_011109529.1	BspA family leucine-rich repeat surface protein	50.3	67.3	30.7
MGA_679	LOCUS_06660	sequence1:686049..686519(-)	partial			WP_011013577.1	hypothetical protein	89.1	64.3	32.4
MGA_720	LOCUS_07070	sequence1:729236..730276(+)	partial			WP_011674729.1	sortase	33.5	39.0	45.7
MGA_723	LOCUS_07100	sequence1:732180..733658(+)	partial			WP_010989469.1	helix-turn-helix domain-containing protein	48.6	51.1	24.8
MGA_750	LOCUS_07370	sequence1:761694..762125(+)	partial			WP_009890423.1	YhcH/YjgK/YiaL family protein	70.6	69.3	34.3
MGA_764	LOCUS_07510	sequence1:775637..775831(-)	frameshift		775650,775986,775467	WP_002305939.1	IS30 family transposase	93.8	18.8	83.3
MGA_765	LOCUS_07520	sequence1:775861..776127(-)	frameshift		775985,776210,775649	WP_002311774.1	IS30 family transposase	55.7	15.4	61.2
MGA_766	LOCUS_07530	sequence1:776897..778030(-)	partial			WP_011815837.1	RNA-directed DNA polymerase	76.4	71.2	28.6
MGA_767	LOCUS_07540	sequence1:778287..780278(+)	partial			WP_011204831.1	RNA-directed DNA polymerase	46.8	49.9	26.7
MGA_822	LOCUS_08090	sequence1:833067..833312(-)	frameshift,internal_stop_codon	832824..832826(-)	833075	WP_002358820.1	ABC transporter permease subunit	84.0	14.0	70.6
MGA_832	LOCUS_08190	sequence1:841328..842029(+)	partial			WP_010890695.1	response regulator	60.5	40.7	27.4
MGA_896	LOCUS_08830	sequence1:909774..910310(+)	internal_stop_codon	910308..910310(+)		WP_003592702.1	LD-carboxypeptidase	98.3	48.9	53.1
MGA_897	LOCUS_08840	sequence1:910323..910850(+)	internal_stop_codon	910308..910310(+)		WP_000255098.1	LD-carboxypeptidase	95.4	48.1	50.3
MGA_899	LOCUS_08860	sequence1:911136..911336(+)	frameshift,internal_stop_codon	911335..911337(+),911051..911053(+)	911017,911074,911150	WP_010963877.1	AIM24 family protein	92.4	24.2	62.3
MGA_900	LOCUS_08870	sequence1:911364..911504(+)	frameshift,internal_stop_codon	911334..911336(+)	911149	WP_010963877.1	AIM24 family protein	95.7	17.5	75.0
MGA_901	LOCUS_08880	sequence1:911639..913003(+)	partial			WP_071854804.1	DUF4767 domain-containing protein	46.3	71.9	25.4
MGA_903	LOCUS_08900	sequence1:913447..914196(-)	partial			WP_002262686.1	ammonium transporter	92.0	62.5	52.9
MGA_906	LOCUS_08930	sequence1:916541..917131(+)	partial			WP_000745378.1	CPBP family intramembrane metalloprotease	77.0	70.9	25.7
MGA_921	LOCUS_09080	sequence1:934332..934952(-)	frameshift		934974	WP_002297218.1	ISL3-like element ISEfa11 family transposase	100.0	47.8	64.1
MGA_924	LOCUS_09110	sequence1:937041..942878(+)	partial			WP_155030720.1	Ig-like domain-containing protein	76.1	65.4	26.3
MGA_937	LOCUS_09240	sequence1:958438..958863(-)	partial			WP_005902733.1	histidinol-phosphatase HisJ family protein	93.6	51.2	40.2
MGA_938	LOCUS_09250	sequence1:959264..960442(-)	partial			WP_000524734.1	diguanylate cyclase	43.4	36.5	36.0
MGA_943	LOCUS_09300	sequence1:964571..964993(-)	partial			WP_004398494.1	cupin domain-containing protein	91.4	68.8	54.7
MGA_980	LOCUS_09640	sequence1:1018129..1018284(+)	partial			WP_002288113.1	teichoic acid D-Ala incorporation-associated protein DltX	72.5	75.5	56.8
MGA_1003	LOCUS_09870	sequence1:1042633..1045917(+)	partial			WP_010989422.1	MucBP domain-containing protein	54.8	42.1	33.6
MGA_1018	LOCUS_10020	sequence1:1063465..1064523(+)	partial			WP_003547408.1	DNA/RNA non-specific endonuclease	58.2	76.2	57.7
MGA_1023	LOCUS_10070	sequence1:1066884..1067789(+)	partial			WP_011921635.1	serine hydrolase	78.7	55.2	38.5
MGA_1028	LOCUS_10120	sequence1:1072575..1072772(+)	partial			WP_004254910.1	homoserine O-succinyltransferase	100.0	20.9	47.8
MGA_1036	LOCUS_10200	sequence1:1079522..1079980(-)	partial			WP_000776693.1	sugar diacid recognition domain-containing protein	98.0	37.9	33.3
MGA_1041	LOCUS_10250	sequence1:1088139..1088993(-)	partial			WP_011475569.1	LysR family transcriptional regulator	61.3	61.8	35.2
MGA_1071	LOCUS_10550	sequence1:1125533..1125841(-)	partial			WP_002355547.1	DUF1827 family protein	67.6	66.3	53.6
MGA_1094	LOCUS_10780	sequence1:1152784..1153377(-)	partial			WP_002355844.1	beta-phosphoglucomutase	62.4	58.1	31.8
MGA_1098	LOCUS_10820	sequence1:1156187..1157008(+)	partial			WP_003566207.1	hypothetical protein	62.6	58.6	28.6
MGA_1105	LOCUS_10890	sequence1:1166050..1167324(-)	partial			WP_002317658.1	hydroxymethylglutaryl-CoA reductase, degradative	98.3	50.9	51.2
MGA_1181	LOCUS_11650	sequence1:1252740..1253252(-)	partial			WP_000072627.1	restriction endonuclease subunit S	100.0	42.1	54.7
MGA_1244	LOCUS_12280	sequence1:1318375..1320039(+)	partial			WP_002286297.1	NlpC/P60 family protein	30.9	23.9	59.1
MGA_1265	LOCUS_12490	sequence1:1342912..1343139(+)	frameshift,internal_stop_codon	1343138..1343140(+),1342901..1342903(+),1343159..1343161(+),1342910..1342912(+)	1342873	WP_188367817.1	recombinase family protein	100.0	37.2	80.5
MGA_1266	LOCUS_12500	sequence1:1343194..1343367(+)	internal_stop_codon	1342909..1342911(+),1343137..1343139(+),1343158..1343160(+),1342900..1342902(+)		WP_188367817.1	recombinase family protein	93.0	25.1	81.1
MGA_1272	LOCUS_12560	sequence1:1345834..1346010(+)	partial			WP_000022815.1	phosphopyruvate hydratase	62.1	8.3	83.3
MGA_1296	LOCUS_12800	sequence1:1373285..1375735(+)	partial			WP_010714156.1	5'-nucleotidase C-terminal domain-containing protein	66.7	41.9	51.1
MGA_1315	LOCUS_12990	sequence1:1391829..1392869(+)	partial			WP_025186864.1	UDP-glucose--hexose-1-phosphate uridylyltransferase	78.0	67.3	29.1
MGA_1330	LOCUS_13140	sequence1:1403993..1404433(+)	partial			WP_002381831.1	YtxH domain-containing protein	95.9	74.9	35.5
MGA_1346	LOCUS_13300	sequence1:1419219..1420628(+)	partial			WP_002386255.1	DUF1958 domain-containing protein	79.1	74.0	49.5
MGA_1356	LOCUS_13400	sequence1:1432534..1433979(-)	partial			WP_002361277.1	amino acid ABC transporter substrate-binding protein/permease	94.6	62.7	68.4
MGA_1393	LOCUS_13770	sequence1:1471598..1471774(+)	partial			WP_003694124.1	30S ribosomal protein S21	74.1	70.5	97.7
MGA_1403	LOCUS_13870	sequence1:1479358..1479927(+)	frameshift		1479885	WP_003660846.1	glycine--tRNA ligase subunit beta	91.5	25.1	54.9
MGA_1404	LOCUS_13880	sequence1:1479939..1481432(+)	frameshift		1479873	WP_002288758.1	glycine--tRNA ligase subunit beta	99.4	71.5	59.3
MGA_1451	LOCUS_14350	sequence1:1539314..1539721(+)	partial			WP_003567569.1	phosphate-starvation-inducible protein PsiE	71.1	66.2	42.7
MGA_1456	LOCUS_14400	sequence1:1543794..1545344(-)	partial			WP_002382310.1	cell division site-positioning protein MapZ family protein	93.8	69.2	27.2
MGA_1479	LOCUS_14630	sequence1:1568461..1570854(-)	partial			WP_011254514.1	DUF1542 domain-containing protein	71.8	25.5	23.1
MGA_1489	LOCUS_14730	sequence1:1580890..1583223(-)	partial			WP_011837563.1	Cna B-type domain-containing protein	50.1	22.7	39.0
MGA_1490	LOCUS_14740	sequence1:1583619..1583849(-)	partial			WP_002294687.1	hypothetical protein	80.3	68.9	47.5
MGA_1511	LOCUS_14950	sequence1:1603682..1604071(-)	partial			WP_010963919.1	GntR family transcriptional regulator	71.3	74.4	43.0
MGA_1513	LOCUS_14970	sequence1:1604852..1605130(-)	partial			WP_002296398.1	MaoC/PaaZ C-terminal domain-containing protein	80.4	46.0	51.4
MGA_1558	LOCUS_15420	sequence1:1651908..1652288(+)	internal_stop_codon	1652286..1652288(+)		WP_009969035.1	azaleucine resistance protein AzlC	96.8	48.0	68.0
MGA_1559	LOCUS_15430	sequence1:1652292..1652606(+)	internal_stop_codon	1652286..1652288(+)		WP_011460301.1	AzlC family ABC transporter permease	93.3	38.3	50.5
MGA_1562	LOCUS_15460	sequence1:1654148..1654432(+)	partial			WP_005658306.1	branched-chain amino acid transporter permease	84.0	74.3	48.1
MGA_1579	LOCUS_15630	sequence1:1673576..1677205(-)	partial			WP_011102048.1	BspA family leucine-rich repeat surface protein	18.6	26.5	25.4
MGA_1591	LOCUS_15750	sequence1:1695212..1695667(+)	partial			WP_025873024.1	DUF4950 domain-containing protein	91.4	35.3	35.7
MGA_1598	LOCUS_15820	sequence1:1701639..1702496(-)	partial			WP_004082954.1	DNA-processing protein DprA	76.8	66.5	33.3
MGA_1600	LOCUS_15840	sequence1:1703997..1704989(-)	partial			WP_011016192.1	retron St85 family RNA-directed DNA polymerase	63.9	61.0	27.9
MGA_1621	LOCUS_16050	sequence1:1726452..1726772(-)	internal_stop_codon	1726452..1726454(-)		WP_010905072.1	N-acetyltransferase	100.0	61.3	51.9
MGA_1642	LOCUS_16260	sequence1:1742797..1744119(-)	partial			WP_000733379.1	polysaccharide deacetylase family protein	50.0	53.7	44.0
MGA_1653	LOCUS_16370	sequence1:1756672..1760880(-)	partial			WP_011837563.1	Cna B-type domain-containing protein	67.1	60.7	38.8
MGA_1695	LOCUS_16790	sequence1:1799048..1801369(-)	partial			WP_025189864.1	tape measure protein	72.8	62.9	42.2
MGA_1758	LOCUS_17420	sequence1:1854177..1856120(-)	partial			WP_164925485.1	LysM domain-containing protein	26.9	46.2	28.9
MGA_1760	LOCUS_17440	sequence1:1856828..1857196(-)	partial			WP_009889012.1	glycopeptide resistance protein VanZ1	55.7	38.5	55.9
MGA_1766	LOCUS_17500	sequence1:1861060..1861242(-)	frameshift,internal_stop_codon	1861282..1861284(-)	1861101	WP_226319392.1	GNAT family N-acetyltransferase	93.3	30.3	41.1
MGA_1767	LOCUS_17510	sequence1:1861282..1861548(-)	internal_stop_codon	1861282..1861284(-)		WP_002387373.1	GNAT family N-acetyltransferase	93.2	43.8	50.0
MGA_1792	LOCUS_17760	sequence1:1881099..1881305(+)	frameshift		1881290,1881302	WP_002305939.1	IS30 family transposase	94.1	20.1	75.0
MGA_1793	LOCUS_17770	sequence1:1881253..1881498(+)	frameshift		1881290,1881302	WP_002287225.1	IS30 family transposase	80.2	20.4	78.5
MGA_1812	LOCUS_17960	sequence1:1906124..1906348(-)	frameshift,internal_stop_codon	1906434..1906436(-)	1906331	WP_011476376.1	pyridoxal phosphate-dependent aminotransferase	90.5	17.0	43.3
MGA_1813	LOCUS_17970	sequence1:1906434..1906730(-)	frameshift,internal_stop_codon	1906433..1906435(-)	1906720,1906336	WP_011016536.1	pyridoxal phosphate-dependent aminotransferase	96.9	24.1	46.9
MGA_1815	LOCUS_17990	sequence1:1907125..1909038(+)	partial			WP_003439379.1	ferrous iron transport protein B	63.6	57.5	57.6
MGA_1873	LOCUS_18540	sequence1:1970160..1970585(-)	partial			WP_002357403.1	EbsA family protein	79.4	73.2	32.7
MGA_1915	LOCUS_18960	sequence1:2013012..2013365(-)	partial			WP_000495755.1	A24 family peptidase	100.0	48.3	32.5
MGA_1938	LOCUS_19190	sequence1:2034456..2035334(+)	partial			WP_012775167.1	cation diffusion facilitator family transporter	98.3	69.7	51.9
MGA_1964	LOCUS_19450	sequence1:2055244..2056635(+)	partial			WP_011166707.1	BspA family leucine-rich repeat surface protein	43.2	42.2	29.7
MGA_1992	LOCUS_19730	sequence1:2090063..2091589(-)	partial			WP_002378718.1	glucosaminidase domain-containing protein	39.2	39.4	61.3
MGA_1999	LOCUS_19800	sequence1:2099487..2100395(-)	partial			WP_003813131.1	AEC family transporter	56.6	57.4	22.6
MGA_2000	LOCUS_19810	sequence1:2100741..2102237(-)	partial			WP_003246729.1	right-handed parallel beta-helix repeat-containing protein	73.9	62.5	28.2
MGA_2001	LOCUS_19820	sequence1:2102405..2104342(-)	partial			WP_168488820.1	CDP-glycerol glycerophosphotransferase family protein	53.6	29.7	35.5
MGA_2016	LOCUS_19970	sequence1:2115067..2115867(+)	partial			WP_102865934.1	GH25 family lysozyme	71.8	59.8	39.3
MGA_2040	LOCUS_20200	sequence2:1792..2913(-)	partial			WP_115413024.1	Ltp family lipoprotein	25.2	28.2	45.8
MGA_2045	LOCUS_20250	sequence2:6578..7258(-)	partial			WP_011125196.1	N-acetylmuramoyl-L-alanine amidase	75.2	48.2	38.2
