{ "type": "genome", "identifier": "GCF_024643205.1", "organism": "Parapedobacter tibetensis", "title": "Parapedobacter tibetensis", "description": "na", "data type": "Genome sequencing and assembly", "organization": "China General Microbiological Culture Collection Center", "publication": [ {} ], "properties": { "assembly_accession": "GCF_024643205.1", "bioproject": "PRJNA224116", "biosample": "SAMN28618040", "wgs_master": "JAMKQJ000000000.1", "refseq_category": "reference genome", "taxid": "2972951", "species_taxid": "2972951", "organism_name": "Parapedobacter tibetensis", "infraspecific_name": "strain=C3-1-R+6", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2022/08/12", "asm_name": "ASM2464320v1", "asm_submitter": "China General Microbiological Culture Collection Center", "gbrs_paired_asm": "GCA_024643205.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/024/643/205/GCF_024643205.1_ASM2464320v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "5984948", "genome_size_ungapped": "5984948", "gc_percent": "46.000000", "replicon_count": "0", "scaffold_count": "88", "contig_count": "88", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_024643205.1-RS_2024_09_05", "annotation_date": "2024-09-05", "total_gene_count": "5101", "protein_coding_gene_count": "5013", "non_coding_gene_count": "50", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2022-08-12", "dateModified": "2022-08-12", "datePublished": "2022-08-12", "_annotation": { "sample_count": 1, "sample_organism": [ "Parapedobacter tibetensis" ], "sample_taxid": [ "2972951" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "China:Tibet" ], "sample_host_location_id": [], "data_size": "1.710 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "5984948", "Number of Sequences": "88", "Longest Sequences (bp)": "686753", "N50 (bp)": "365563", "Gap Ratio (%)": "0.000785", "GCcontent (%)": "46.2", "Number of CDSs": "4894", "Average Protein Length": "356.6", "Coding Ratio (%)": "87.5", "Number of rRNAs": "3", "Number of tRNAs": "43", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Parapedobacter pyrenivorans", "strain": "strain=CGMCC 1.12195", "accession": "GCA_014636865.1", "taxid": 1305674, "species_taxid": 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