{ "type": "genome", "identifier": "GCF_024721115.1", "organism": "Salipiger pentaromativorans", "title": "Salipiger pentaromativorans", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Institute of Urban Environment,CAS", "publication": [ {} ], "properties": { "assembly_accession": "GCF_024721115.1", "bioproject": "PRJNA224116", "biosample": "SAMN28177936", "wgs_master": "JAMDHK000000000.1", "refseq_category": "reference genome", "taxid": "2943193", "species_taxid": "2943193", "organism_name": "Salipiger pentaromativorans", "infraspecific_name": "strain=P9", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2022/08/19", "asm_name": "ASM2472111v1", "asm_submitter": "Institute of Urban Environment,CAS", "gbrs_paired_asm": "GCA_024721115.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/024/721/115/GCF_024721115.1_ASM2472111v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "5281863", "genome_size_ungapped": "5279967", "gc_percent": "66.000000", "replicon_count": "0", "scaffold_count": "39", "contig_count": "39", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_024721115.1-RS_2024_03_28", "annotation_date": "2024-03-28", "total_gene_count": "5133", "protein_coding_gene_count": "5034", "non_coding_gene_count": "51", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2022-08-19", "dateModified": "2022-08-19", "datePublished": "2022-08-19", "_annotation": { "sample_count": 1, "sample_organism": [ "Salipiger pentaromativorans" ], "sample_taxid": [ "2943193" ], "sample_host_organism": [], 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"ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mameliella alba", "strain": "strain=CGMCC 1.7290", "accession": "GCA_900101505.1", "taxid": 561184, "species_taxid": 561184, "relation_to_type": "suspected-type", "validated": true, "ani": 79.5589, "matched_fragments": 706, "total_fragments": 1741, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mameliella alba", "strain": "strain=DSM 26384", "accession": "GCA_003051025.1", "taxid": 561184, "species_taxid": 561184, "relation_to_type": "suspected-type", "validated": true, "ani": 79.5565, "matched_fragments": 712, "total_fragments": 1741, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhodovulum tesquicola", "strain": "strain=A-36s", "accession": "GCA_024128855.1", "taxid": 540254, "species_taxid": 540254, "relation_to_type": "type", "validated": true, "ani": 79.031, "matched_fragments": 575, "total_fragments": 1741, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mameliella sediminis", "strain": "strain=DP3N28-2", "accession": "GCA_019218285.1", "taxid": 2836866, "species_taxid": 2836866, "relation_to_type": "type", "validated": true, "ani": 78.8572, "matched_fragments": 583, "total_fragments": 1741, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sulfitobacter indolifex", "strain": "strain=DSM 14862", "accession": "GCA_022788655.1", "taxid": 225422, "species_taxid": 225422, "relation_to_type": "type", "validated": true, "ani": 77.7536, "matched_fragments": 336, "total_fragments": 1741, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 4.17, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_017311415.1", "gtdb_species": "s__Salipiger abyssi_A", "ani": 87.8802, "matched_fragments": 1148, "total_fragments": 1741, "gtdb_taxonomy": 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