{ "tc_result": [ { "organism_name": "Sphingomicrobium aestuariivivum", "strain": "strain=KCTC 42286", "accession": "GCA_024721585.1", "taxid": 1582356, "species_taxid": 1582356, "relation_to_type": "type", "validated": true, "ani": 99.9999, "matched_fragments": 782, "total_fragments": 782, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Sphingomicrobium aestuariivivum", "strain": "strain=KCTC 42286", "accession": "GCA_022953075.1", "taxid": 1582356, "species_taxid": 1582356, "relation_to_type": "type", "validated": true, "ani": 99.9961, "matched_fragments": 779, "total_fragments": 782, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Sphingomicrobium astaxanthinifaciens", "strain": "strain=JCM 18551", "accession": "GCA_022865105.1", "taxid": 1227949, "species_taxid": 1227949, "relation_to_type": "type", "validated": true, "ani": 86.4235, "matched_fragments": 623, "total_fragments": 782, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomicrobium lutaoense", "strain": "strain=DSM 24194", "accession": "GCA_014195685.1", "taxid": 515949, "species_taxid": 515949, "relation_to_type": "type", "validated": true, "ani": 80.2968, "matched_fragments": 442, "total_fragments": 782, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomicrobium flavum", "strain": "strain=JCM 18555", "accession": "GCA_024721605.1", "taxid": 1229164, "species_taxid": 1229164, "relation_to_type": "type", "validated": true, "ani": 79.584, "matched_fragments": 433, "total_fragments": 782, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas ginsengisoli An et al. 2013", "strain": "strain=KACC 16858", "accession": "GCA_009363895.1", "taxid": 363835, "species_taxid": 363835, "relation_to_type": "type", "validated": true, "ani": 78.9523, "matched_fragments": 366, "total_fragments": 782, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas mesophila", "strain": "strain=SYSUP0001", "accession": "GCA_003499275.1", "taxid": 2303576, "species_taxid": 2303576, "relation_to_type": "type", "validated": true, "ani": 78.7751, "matched_fragments": 347, "total_fragments": 782, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas ginkgonis", "strain": "strain=HMF7854", "accession": "GCA_003970925.1", "taxid": 2315330, "species_taxid": 2315330, "relation_to_type": "type", "validated": true, "ani": 78.6349, "matched_fragments": 345, "total_fragments": 782, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas segetis", "strain": "strain=YJ09", "accession": "GCA_009720245.1", "taxid": 1104779, "species_taxid": 1104779, "relation_to_type": "type", "validated": true, "ani": 78.3877, "matched_fragments": 244, "total_fragments": 782, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas leidyi", "strain": "strain=DSM 4733", "accession": "GCA_011761945.1", "taxid": 68569, "species_taxid": 68569, "relation_to_type": "type", "validated": true, "ani": 78.303, "matched_fragments": 294, "total_fragments": 782, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas kyeonggiensis", "strain": "strain=DSM 101806", "accession": "GCA_014196745.1", "taxid": 1268553, "species_taxid": 1268553, "relation_to_type": "type", "validated": true, "ani": 78.2811, "matched_fragments": 300, "total_fragments": 782, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas parva", "strain": "strain=17J27-24", "accession": "GCA_004564275.1", "taxid": 2555898, "species_taxid": 2555898, "relation_to_type": "type", "validated": true, "ani": 78.1559, "matched_fragments": 290, "total_fragments": 782, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas lenta", "strain": "strain=1PNM-20", "accession": "GCA_002288825.1", "taxid": 1141887, "species_taxid": 1141887, "relation_to_type": "type", "validated": true, "ani": 77.6706, "matched_fragments": 248, "total_fragments": 782, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_014195685.1", "gtdb_species": "s__Sphingomicrobium lutaoense", "ani": 80.3062, "matched_fragments": 442, "total_fragments": 782, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomicrobium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000585415.1", "gtdb_species": "s__Sphingomicrobium jaspsi", "ani": 79.2207, "matched_fragments": 358, "total_fragments": 782, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomicrobium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_009363895.1", "gtdb_species": "s__Sphingomicrobium ginsengisoli", "ani": 78.9645, "matched_fragments": 365, "total_fragments": 782, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomicrobium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_003499275.1", "gtdb_species": "s__Sphingomicrobium mesophila", "ani": 78.7996, "matched_fragments": 345, "total_fragments": 782, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomicrobium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_013001055.1", "gtdb_species": "s__Sphingomicrobium sp004282935", "ani": 78.7926, "matched_fragments": 355, "total_fragments": 782, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomicrobium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.85", "min_intra_species_ani": "99.85", "mean_intra_species_af": "0.95", "min_intra_species_af": "0.95", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_011320075.1", "gtdb_species": "s__Allosphingosinicella sp011320075", "ani": 78.6946, "matched_fragments": 295, "total_fragments": 782, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Allosphingosinicella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003970925.1", "gtdb_species": "s__Sphingomicrobium sp003970925", "ani": 78.6404, "matched_fragments": 344, "total_fragments": 782, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomicrobium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_009720245.1", "gtdb_species": "s__Sphingomicrobium sp009720245", "ani": 78.3729, "matched_fragments": 245, "total_fragments": 782, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomicrobium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_007998985.1", "gtdb_species": "s__Sphingomicrobium xanthus", "ani": 78.3034, "matched_fragments": 257, "total_fragments": 782, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomicrobium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_014196745.1", "gtdb_species": "s__Sphingomonas kyeonggiensis", "ani": 78.2558, "matched_fragments": 302, "total_fragments": 782, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003097155.1", "gtdb_species": "s__Sphingomicrobium sp003097155", "ani": 78.2368, "matched_fragments": 280, "total_fragments": 782, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomicrobium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_017744835.1", "gtdb_species": "s__Sphingomonas sp017744835", "ani": 78.1912, "matched_fragments": 297, "total_fragments": 782, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_016025255.1", "gtdb_species": "s__Allosphingosinicella sp016025255", "ani": 78.1685, "matched_fragments": 251, "total_fragments": 782, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Allosphingosinicella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_014489495.1", "gtdb_species": "s__Sphingomicrobium daechungense", "ani": 78.1258, "matched_fragments": 215, "total_fragments": 782, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomicrobium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_002127225.1", "gtdb_species": "s__Sphingomonas sp002127225", "ani": 78.0922, "matched_fragments": 306, "total_fragments": 782, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001429065.1", "gtdb_species": "s__Rhizorhabdus sp001429065", "ani": 78.0858, "matched_fragments": 266, "total_fragments": 782, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Rhizorhabdus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_014204495.1", "gtdb_species": "s__Sphingomonas kyeonggiensis_A", "ani": 78.0816, "matched_fragments": 305, "total_fragments": 782, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_002556635.1", "gtdb_species": "s__Novosphingobium sp002556635", "ani": 77.9969, "matched_fragments": 248, "total_fragments": 782, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Novosphingobium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_902806285.1", "gtdb_species": "s__Sphingomicrobium sp902806285", "ani": 77.9178, "matched_fragments": 267, "total_fragments": 782, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomicrobium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_013408095.1", "gtdb_species": "s__Novosphingobium marinum", "ani": 77.9017, "matched_fragments": 196, "total_fragments": 782, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Novosphingobium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_004135585.1", "gtdb_species": "s__Allosphingosinicella sp004135585", "ani": 77.894, "matched_fragments": 265, "total_fragments": 782, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Allosphingosinicella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_019239915.1", "gtdb_species": "s__Sphingomonas_N sp019239915", "ani": 77.851, "matched_fragments": 243, "total_fragments": 782, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas_N", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000803645.1", "gtdb_species": "s__Sphingopyxis fribergensis", "ani": 77.6963, "matched_fragments": 258, "total_fragments": 782, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingopyxis", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_002288825.1", "gtdb_species": "s__Sphingomonas lenta", "ani": 77.6832, "matched_fragments": 247, "total_fragments": 782, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }