# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_2	LOCUS_00010	sequence1:525..920(+)	internal_stop_codon	918..920(+),462..464(+),960..962(+)		WP_004114028.1	chromosomal replication initiator protein DnaA	100.0	25.2	37.0
MGA_5	LOCUS_00040	sequence1:2617..2790(+)	partial			WP_011254000.1	S4 domain-containing protein YaaA	87.7	65.8	50.0
MGA_6	LOCUS_00050	sequence1:2855..4051(+)	internal_stop_codon	4049..4051(+)		WP_011167092.1	excinuclease ABC subunit UvrA	98.5	42.0	49.4
MGA_7	LOCUS_00060	sequence1:4064..4519(+)	internal_stop_codon	4049..4051(+),4517..4519(+)		WP_003401468.1	excinuclease ABC subunit UvrA	100.0	16.1	62.3
MGA_8	LOCUS_00070	sequence1:4592..5692(+)	internal_stop_codon	4517..4519(+)		WP_002262666.1	excinuclease ABC subunit UvrA	98.6	38.3	65.4
MGA_11	LOCUS_00100	sequence1:5982..6542(+)	frameshift,internal_stop_codon	5937..5939(+)	6536	WP_010874580.1	HPr(Ser) kinase/phosphatase	93.5	56.4	38.6
MGA_14	LOCUS_00130	sequence1:7629..7784(+)	internal_stop_codon	7782..7784(+)		WP_003722610.1	thioredoxin-disulfide reductase	98.0	15.7	58.0
MGA_15	LOCUS_00140	sequence1:7797..8549(+)	internal_stop_codon	7782..7784(+)		WP_000272302.1	thioredoxin-disulfide reductase	99.6	81.8	37.8
MGA_19	LOCUS_00180	sequence1:12249..12824(+)	internal_stop_codon	12822..12824(+)		WP_003232026.1	signal recognition particle-docking protein FtsY	100.0	51.4	42.4
MGA_20	LOCUS_00190	sequence1:12978..13304(+)	internal_stop_codon	12822..12824(+)		WP_000007650.1	signal recognition particle-docking protein FtsY	100.0	32.8	62.0
MGA_21	LOCUS_00200	sequence1:13395..13820(+)	internal_stop_codon	14064..14066(+),13818..13820(+),13914..13916(+)		WP_000026653.1	Na/Pi cotransporter family protein	87.2	21.9	40.7
MGA_23	LOCUS_00220	sequence1:15191..15511(-)	partial			WP_012775686.1	HIT family protein	94.3	73.0	50.0
MGA_30	LOCUS_00290	sequence1:19493..19663(+)	internal_stop_codon	19910..19912(+),19949..19951(+),19661..19663(+)		WP_013448152.1	phosphotransferase	98.2	23.1	52.7
MGA_31	LOCUS_00300	sequence1:19715..19912(+)	internal_stop_codon	20126..20128(+),19910..19912(+),19961..19963(+),19949..19951(+),19661..19663(+),20132..20134(+)		WP_013448152.1	phosphotransferase	100.0	27.3	46.2
MGA_36	LOCUS_00350	sequence1:22112..22462(+)	internal_stop_codon	22460..22462(+)		WP_011459549.1	ABC transporter ATP-binding protein	90.5	20.4	59.0
MGA_37	LOCUS_00360	sequence1:22466..23128(+)	internal_stop_codon	23126..23128(+),22460..22462(+)		WP_011166221.1	ABC transporter ATP-binding protein	98.2	39.6	43.2
MGA_38	LOCUS_00370	sequence1:23186..23683(+)	internal_stop_codon	23126..23128(+)		WP_011166221.1	ABC transporter ATP-binding protein	90.9	27.9	48.7
MGA_39	LOCUS_00380	sequence1:23775..24158(+)	internal_stop_codon	24180..24182(+),24156..24158(+),24276..24278(+),24426..24428(+)		WP_004082660.1	ABC transporter permease	100.0	38.1	34.4
MGA_45	LOCUS_00440	sequence1:27788..28066(+)	partial			WP_029494826.1	HAD family hydrolase	85.9	29.9	41.8
MGA_46	LOCUS_00450	sequence1:28157..28606(+)	partial			WP_012027099.1	Cof-type HAD-IIB family hydrolase	70.5	39.1	35.8
MGA_54	LOCUS_00530	sequence1:34315..35274(-)	partial			WP_003232028.1	chromosome segregation protein SMC	89.0	23.6	42.6
MGA_55	LOCUS_00540	sequence1:35449..35937(-)	internal_stop_codon	35974..35976(-),35449..35451(-)		WP_003232028.1	chromosome segregation protein SMC	97.5	14.0	33.1
MGA_56	LOCUS_00550	sequence1:35974..37071(-)	internal_stop_codon	35974..35976(-),37114..37116(-)		WP_011166660.1	chromosome segregation protein SMC	100.0	36.9	29.2
MGA_57	LOCUS_00560	sequence1:37114..37251(-)	internal_stop_codon	37114..37116(-)		WP_011403652.1	chromosome segregation protein SMC	100.0	3.8	71.1
MGA_58	LOCUS_00570	sequence1:37343..37654(-)	internal_stop_codon	37667..37669(-),37775..37777(-)		WP_012546112.1	16S rRNA (uracil(1498)-N(3))-methyltransferase	87.4	39.4	40.4
MGA_66	LOCUS_00650	sequence1:41859..43091(+)	internal_stop_codon	43089..43091(+),43113..43115(+),41601..41603(+),43119..43121(+),41847..41849(+)		WP_010874862.1	P80 family lipoprotein	99.5	54.4	28.4
MGA_68	LOCUS_00670	sequence1:44335..44772(+)	internal_stop_codon	44770..44772(+)		WP_010874491.1	ABC transporter ATP-binding protein	76.6	18.9	63.1
MGA_70	LOCUS_00690	sequence1:45472..45654(+)	internal_stop_codon	45328..45330(+),45454..45456(+),45652..45654(+)		WP_010874491.1	ABC transporter ATP-binding protein	98.3	10.1	79.7
MGA_71	LOCUS_00700	sequence1:45721..46179(+)	internal_stop_codon	45454..45456(+),45652..45654(+)		WP_010874491.1	ABC transporter ATP-binding protein	100.0	26.8	43.3
MGA_73	LOCUS_00720	sequence1:46769..47173(+)	internal_stop_codon	46664..46666(+),46685..46687(+),46544..46546(+),46727..46729(+)		WP_010874492.1	sugar ABC transporter permease	82.8	33.7	45.0
MGA_75	LOCUS_00740	sequence1:47928..48098(+)	internal_stop_codon	47922..47924(+),47856..47858(+),47871..47873(+),47823..47825(+)		WP_010874493.1	carbohydrate ABC transporter permease	83.9	14.7	57.4
MGA_76	LOCUS_00750	sequence1:48367..48657(+)	internal_stop_codon	48655..48657(+)		WP_002455871.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	92.7	62.1	32.6
MGA_79	LOCUS_00780	sequence1:50311..50835(+)	partial			WP_002484976.1	pseudouridine synthase	95.4	71.3	44.9
MGA_80	LOCUS_00790	sequence1:50844..51218(+)	internal_stop_codon	51267..51269(+),51216..51218(+)		WP_010874497.1	bifunctional oligoribonuclease/PAP phosphatase NrnA	99.2	38.6	43.2
MGA_81	LOCUS_00800	sequence1:51806..52198(+)	internal_stop_codon	52196..52198(+),52259..52261(+),51609..51611(+)		WP_010874497.1	bifunctional oligoribonuclease/PAP phosphatase NrnA	90.8	36.7	57.1
MGA_83	LOCUS_00820	sequence1:52886..53149(+)	internal_stop_codon	53147..53149(+)		WP_002358391.1	PTS sugar transporter subunit IIA	86.2	52.8	36.8
MGA_84	LOCUS_00830	sequence1:53521..53643(+)	internal_stop_codon	53458..53460(+),53878..53880(+),53818..53820(+),53641..53643(+),53809..53811(+),53446..53448(+)		WP_003643180.1	leucine--tRNA ligase	100.0	5.0	77.5
MGA_85	LOCUS_00840	sequence1:54121..54384(+)	internal_stop_codon	54382..54384(+),53878..53880(+),53992..53994(+),54085..54087(+),54658..54660(+)		WP_011948005.1	leucine--tRNA ligase	92.0	10.0	44.4
MGA_86	LOCUS_00850	sequence1:54427..54660(+)	internal_stop_codon	54817..54819(+),54382..54384(+),54682..54684(+),54892..54894(+),54658..54660(+),54877..54879(+)		WP_001108730.1	leucine--tRNA ligase	100.0	9.8	58.2
MGA_87	LOCUS_00860	sequence1:55120..55263(+)	internal_stop_codon	55387..55389(+),55048..55050(+),54892..54894(+),55294..55296(+),54979..54981(+),55261..55263(+),54877..54879(+)		WP_010706700.1	leucine--tRNA ligase	89.4	5.2	78.6
MGA_89	LOCUS_00880	sequence1:55983..56177(+)	partial			WP_011183245.1	YneF family protein	85.9	66.3	52.7
MGA_90	LOCUS_00890	sequence1:56898..57380(+)	internal_stop_codon	56799..56801(+),57378..57380(+)		WP_011183428.1	class 1b ribonucleoside-diphosphate reductase subunit beta	100.0	47.1	90.0
MGA_92	LOCUS_00910	sequence1:57879..58874(+)	internal_stop_codon	58872..58874(+)		WP_011183426.1	class 1b ribonucleoside-diphosphate reductase subunit alpha	99.4	45.6	72.0
MGA_93	LOCUS_00920	sequence1:58878..59519(+)	internal_stop_codon	59517..59519(+),59589..59591(+),58872..58874(+),59778..59780(+)		WP_011183426.1	class 1b ribonucleoside-diphosphate reductase subunit alpha	100.0	29.5	76.1
MGA_94	LOCUS_00930	sequence1:59643..59780(+)	internal_stop_codon	59589..59591(+),59517..59519(+),59778..59780(+)		WP_000194382.1	class 1b ribonucleoside-diphosphate reductase subunit alpha	97.8	6.1	86.4
MGA_95	LOCUS_00940	sequence1:59787..60044(+)	internal_stop_codon	59589..59591(+),59517..59519(+),59778..59780(+)		WP_014584346.1	class 1b ribonucleoside-diphosphate reductase subunit alpha	100.0	11.7	74.1
MGA_96	LOCUS_00950	sequence1:60195..60962(+)	internal_stop_codon	60960..60962(+)		WP_011183371.1	translation elongation factor 4	100.0	43.2	68.1
MGA_97	LOCUS_00960	sequence1:61233..61997(+)	internal_stop_codon	60960..60962(+)		WP_002262717.1	translation elongation factor 4	100.0	41.6	61.0
MGA_107	LOCUS_01060	sequence1:68761..69054(+)	internal_stop_codon	68524..68526(+),68692..68694(+)		WP_010874579.1	tRNA lysidine(34) synthetase TilS	97.9	32.5	36.8
MGA_108	LOCUS_01070	sequence1:69892..71520(+)	partial			WP_011183568.1	ATP-dependent zinc metalloprotease FtsH	89.9	73.8	53.4
MGA_109	LOCUS_01080	sequence1:71674..72123(+)	internal_stop_codon	71611..71613(+)		WP_009891775.1	ribosome biogenesis GTP-binding protein YihA/YsxC	97.3	73.9	36.0
MGA_118	LOCUS_01170	sequence1:74511..75146(+)	internal_stop_codon	74247..74249(+),75144..75146(+)		WP_002899548.1	DHH family phosphoesterase	96.7	29.0	29.0
MGA_119	LOCUS_01180	sequence1:75183..75548(+)	internal_stop_codon	75144..75146(+)		WP_002899548.1	DHH family phosphoesterase	90.1	16.6	33.9
MGA_121	LOCUS_01200	sequence1:75984..76883(+)	internal_stop_codon	76881..76883(+)		WP_003641638.1	replicative DNA helicase	99.7	63.5	30.4
MGA_122	LOCUS_01210	sequence1:76929..77354(+)	internal_stop_codon	76881..76883(+)		WP_011182981.1	replicative DNA helicase	92.9	29.5	52.6
MGA_123	LOCUS_01220	sequence1:77355..78098(+)	internal_stop_codon	78096..78098(+)		WP_010874516.1	hemolysin family protein	93.9	56.8	28.0
MGA_131	LOCUS_01300	sequence1:83505..83720(+)	internal_stop_codon	83718..83720(+)		WP_001257738.1	guanylate kinase	94.4	32.7	52.2
MGA_132	LOCUS_01310	sequence1:83886..84083(+)	internal_stop_codon	83718..83720(+)		WP_003699957.1	guanylate kinase	90.8	28.8	47.5
MGA_133	LOCUS_01320	sequence1:84084..84509(+)	internal_stop_codon	84507..84509(+)		WP_011183117.1	protein phosphatase 2C domain-containing protein	98.6	54.7	37.6
MGA_135	LOCUS_01340	sequence1:84821..85540(+)	internal_stop_codon	85538..85540(+)		WP_000579563.1	serine/threonine protein kinase Stk1	96.7	34.0	39.2
MGA_136	LOCUS_01350	sequence1:85826..86416(+)	internal_stop_codon	86612..86614(+),86414..86416(+)		WP_001161981.1	ribosome small subunit-dependent GTPase A	98.0	66.4	44.1
MGA_137	LOCUS_01360	sequence1:86920..87309(+)	internal_stop_codon	86746..86748(+),86878..86880(+)		WP_000589966.1	ribulose-phosphate 3-epimerase	69.0	41.6	49.4
MGA_138	LOCUS_01370	sequence1:87385..87567(-)	partial			WP_011183124.1	50S ribosomal protein L28	71.7	65.2	76.7
MGA_142	LOCUS_01410	sequence1:89668..91488(+)	partial			WP_003549111.1	DNA polymerase III subunit gamma/tau	58.7	60.2	42.1
MGA_150	LOCUS_01490	sequence1:95003..95233(+)	internal_stop_codon	95231..95233(+),95399..95401(+)		WP_010932049.1	TIGR00282 family metallophosphoesterase	92.1	25.6	47.1
MGA_151	LOCUS_01500	sequence1:95435..95809(+)	internal_stop_codon	95231..95233(+),95399..95401(+)		WP_012870003.1	TIGR00282 family metallophosphoesterase	77.4	36.5	55.2
MGA_158	LOCUS_01560	sequence1:105447..105683(+)	internal_stop_codon	105681..105683(+)		WP_003974266.1	50S ribosomal protein L4	64.1	22.8	50.0
MGA_163	LOCUS_01610	sequence1:108413..108670(+)	internal_stop_codon	108668..108670(+)		WP_002356207.1	30S ribosomal protein S3	100.0	39.0	67.1
MGA_164	LOCUS_01620	sequence1:109012..109131(+)	internal_stop_codon	108985..108987(+),108829..108831(+)		WP_003701312.1	50S ribosomal protein L16	94.9	25.7	64.9
MGA_169	LOCUS_01670	sequence1:110325..110555(+)	internal_stop_codon	110553..110555(+),110613..110615(+)		WP_001829778.1	50S ribosomal protein L5	100.0	42.5	59.2
MGA_170	LOCUS_01680	sequence1:110631..110873(+)	internal_stop_codon	110553..110555(+),110613..110615(+)		WP_003435673.1	50S ribosomal protein L5	96.2	42.8	64.9
MGA_176	LOCUS_01740	sequence1:113056..113220(+)	internal_stop_codon	113218..113220(+),113341..113343(+)		WP_003701328.1	50S ribosomal protein L15	100.0	37.5	50.0
MGA_179	LOCUS_01770	sequence1:114056..114466(+)	internal_stop_codon	114464..114466(+),114011..114013(+)		WP_011183039.1	preprotein translocase subunit SecY	98.5	27.8	42.2
MGA_180	LOCUS_01780	sequence1:114545..114922(+)	internal_stop_codon	114464..114466(+)		WP_011183039.1	preprotein translocase subunit SecY	84.0	22.2	39.8
MGA_182	LOCUS_01800	sequence1:115563..116216(+)	internal_stop_codon	116214..116216(+)		WP_003421130.1	type I methionyl aminopeptidase	94.0	82.3	49.5
MGA_185	LOCUS_01830	sequence1:117451..117762(+)	internal_stop_codon	117760..117762(+)		WP_013061621.1	DNA-directed RNA polymerase subunit alpha	63.1	19.8	63.1
MGA_186	LOCUS_01840	sequence1:117802..118449(+)	internal_stop_codon	117760..117762(+)		WP_010874548.1	DNA-directed RNA polymerase subunit alpha	97.7	60.9	31.4
MGA_195	LOCUS_01930	sequence1:125116..125826(+)	internal_stop_codon	125824..125826(+)		WP_011183185.1	PolC-type DNA polymerase III	98.7	16.3	39.8
MGA_196	LOCUS_01940	sequence1:125878..126603(+)	internal_stop_codon	126601..126603(+),125824..125826(+)		WP_011166548.1	PolC-type DNA polymerase III	95.9	15.8	40.9
MGA_197	LOCUS_01950	sequence1:126619..127329(+)	internal_stop_codon	126601..126603(+),127327..127329(+)		WP_011674539.1	DNA polymerase III subunit alpha	100.0	16.3	57.2
MGA_198	LOCUS_01960	sequence1:127417..127665(+)	internal_stop_codon	127327..127329(+),127663..127665(+),127867..127869(+),127942..127944(+)		WP_011183185.1	PolC-type DNA polymerase III	100.0	5.5	63.4
MGA_205	LOCUS_02030	sequence1:130796..132430(+)	internal_stop_codon	132428..132430(+)		WP_000036341.1	translation initiation factor IF-2	94.5	76.1	47.7
MGA_210	LOCUS_02080	sequence1:135110..135424(+)	partial			WP_011254531.1	ABC transporter ATP-binding protein	87.5	27.1	43.9
MGA_211	LOCUS_02090	sequence1:135593..135850(+)	internal_stop_codon	135422..135424(+),135848..135850(+)		WP_011166700.1	ABC transporter ATP-binding protein	98.8	20.7	50.0
MGA_212	LOCUS_02100	sequence1:135884..136177(+)	internal_stop_codon	135848..135850(+)		WP_003436292.1	ABC transporter ATP-binding protein	75.3	20.5	39.7
MGA_213	LOCUS_02110	sequence1:136581..137012(+)	internal_stop_codon	136458..136460(+),137010..137012(+)		WP_020862766.1	sugar ABC transporter permease	98.6	43.0	37.9
MGA_215	LOCUS_02130	sequence1:138749..138946(-)	internal_stop_codon	139166..139168(-),138962..138964(-)		WP_001831336.1	redox-regulated ATPase YchF	96.9	17.3	69.8
MGA_216	LOCUS_02140	sequence1:139166..139912(-)	internal_stop_codon	139166..139168(-),138962..138964(-)		WP_000524657.1	redox-regulated ATPase YchF	91.9	62.0	50.4
MGA_217	LOCUS_02150	sequence1:140236..140412(-)	internal_stop_codon	140227..140229(-),140236..140238(-),140470..140472(-),140194..140196(-)		WP_011166240.1	FMN-dependent NADH-azoreductase	100.0	29.1	65.5
MGA_220	LOCUS_02180	sequence1:142364..142951(-)	internal_stop_codon	142964..142966(-)		WP_005898141.1	magnesium transporter	99.0	35.9	31.1
MGA_221	LOCUS_02190	sequence1:142964..143350(-)	internal_stop_codon	142964..142966(-),143384..143386(-)		WP_004080209.1	magnesium transporter	94.5	26.9	38.5
MGA_222	LOCUS_02200	sequence1:143384..143803(-)	internal_stop_codon	143384..143386(-)		WP_005898141.1	magnesium transporter	85.6	26.6	40.3
MGA_223	LOCUS_02210	sequence1:143819..144325(-)	partial			WP_011254229.1	diadenylate cyclase CdaA	84.5	50.0	49.7
MGA_224	LOCUS_02220	sequence1:144709..145305(-)	internal_stop_codon	145363..145365(-),145348..145350(-),144709..144711(-),145414..145416(-)		WP_003022170.1	transketolase	100.0	30.6	38.4
MGA_225	LOCUS_02230	sequence1:145414..146262(-)	internal_stop_codon	145363..145365(-),145348..145350(-),145414..145416(-),146341..146343(-)		WP_010989730.1	transketolase	93.6	41.1	37.4
MGA_227	LOCUS_02250	sequence1:146846..147187(-)	internal_stop_codon	147197..147199(-),146846..146848(-)		WP_000677358.1	PTS ascorbate transporter subunit IIC	93.8	22.4	64.2
MGA_228	LOCUS_02260	sequence1:147197..148015(-)	internal_stop_codon	147197..147199(-)		WP_011183539.1	PTS ascorbate transporter subunit IIC	86.4	46.2	35.7
MGA_249	LOCUS_02470	sequence1:162968..163954(+)	internal_stop_codon	163952..163954(+)		WP_012583823.1	pyrimidine-nucleoside phosphorylase	95.4	72.1	59.2
MGA_250	LOCUS_02480	sequence1:164030..164263(+)	internal_stop_codon	163952..163954(+)		WP_010874421.1	thymidine phosphorylase	70.1	12.8	57.4
MGA_251	LOCUS_02490	sequence1:164467..164931(+)	internal_stop_codon	164389..164391(+)		WP_003439345.1	deoxyribose-phosphate aldolase	94.2	66.2	59.3
MGA_254	LOCUS_02520	sequence1:166623..167207(+)	internal_stop_codon	167223..167225(+),167205..167207(+)		WP_011172865.1	endopeptidase La	78.4	18.6	30.1
MGA_256	LOCUS_02540	sequence1:167535..168401(+)	internal_stop_codon	168399..168401(+)		WP_020862721.1	endopeptidase La	98.6	35.9	58.1
MGA_257	LOCUS_02550	sequence1:168531..168743(+)	internal_stop_codon	168399..168401(+)		WP_011389427.1	endopeptidase La	91.4	7.9	71.9
MGA_258	LOCUS_02560	sequence1:168843..170012(+)	internal_stop_codon	170010..170012(+)		WP_011183317.1	AAA family ATPase	98.2	54.0	51.8
MGA_259	LOCUS_02570	sequence1:170208..170945(+)	internal_stop_codon	170010..170012(+)		WP_011183317.1	AAA family ATPase	92.7	32.5	58.4
MGA_264	LOCUS_02620	sequence1:172479..172778(+)	partial			WP_003421370.1	ATP synthase F0 subunit C	64.6	74.4	50.0
MGA_267	LOCUS_02650	sequence1:173910..174662(+)	internal_stop_codon	174660..174662(+)		WP_003421367.1	F0F1 ATP synthase subunit alpha	98.4	49.0	58.1
MGA_268	LOCUS_02660	sequence1:174663..175484(+)	internal_stop_codon	174660..174662(+)		WP_011167040.1	F0F1 ATP synthase subunit alpha	91.9	49.3	58.3
MGA_272	LOCUS_02700	sequence1:178251..178748(+)	internal_stop_codon	178746..178748(+),178236..178238(+)		WP_011836977.1	ribosome biogenesis GTPase YlqF	100.0	59.0	42.5
MGA_276	LOCUS_02740	sequence1:181927..182844(+)	internal_stop_codon	182842..182844(+)		WP_011183072.1	pyruvate kinase	98.4	62.8	59.0
MGA_277	LOCUS_02750	sequence1:182872..183360(+)	internal_stop_codon	182842..182844(+)		WP_011183072.1	pyruvate kinase	96.9	32.4	43.3
MGA_278	LOCUS_02760	sequence1:183455..183799(+)	partial			WP_164919770.1	YigZ family protein	93.0	54.8	49.1
MGA_282	LOCUS_02800	sequence1:186373..186681(+)	internal_stop_codon	186679..186681(+)		WP_011183520.1	30S ribosomal protein S7	98.0	64.5	62.0
MGA_283	LOCUS_02810	sequence1:186718..186840(+)	internal_stop_codon	186679..186681(+)		WP_003722012.1	30S ribosomal protein S7	100.0	25.6	75.0
MGA_284	LOCUS_02820	sequence1:186847..187002(+)	internal_stop_codon	187000..187002(+),187060..187062(+)		WP_011166361.1	elongation factor G	100.0	7.4	84.3
MGA_285	LOCUS_02830	sequence1:187162..188163(+)	internal_stop_codon	187000..187002(+),188371..188373(+),188161..188163(+),187060..187062(+)		WP_011183519.1	elongation factor G	100.0	48.2	69.7
MGA_286	LOCUS_02840	sequence1:188200..188373(+)	internal_stop_codon	188371..188373(+),188161..188163(+)		WP_002218568.1	elongation factor G	100.0	8.1	82.5
MGA_287	LOCUS_02850	sequence1:188485..188937(+)	internal_stop_codon	188371..188373(+)		WP_011393940.1	elongation factor G	95.3	20.5	63.6
MGA_288	LOCUS_02860	sequence1:189083..189274(+)	internal_stop_codon	189488..189490(+),189272..189274(+)		WP_002287447.1	glutamate--tRNA ligase	100.0	13.0	74.6
MGA_289	LOCUS_02870	sequence1:190298..190471(+)	internal_stop_codon	190130..190132(+),190049..190051(+)		WP_011183547.1	glutamate--tRNA ligase	100.0	11.8	47.4
MGA_295	LOCUS_02930	sequence1:192780..192998(-)	internal_stop_codon	193032..193034(-)		WP_011166712.1	alpha/beta hydrolase	94.4	25.9	51.5
MGA_296	LOCUS_02940	sequence1:193032..193568(-)	internal_stop_codon	193032..193034(-)		WP_011166713.1	alpha/beta hydrolase	87.1	59.0	42.0
MGA_299	LOCUS_02970	sequence1:195134..195274(-)	internal_stop_codon	195308..195310(-),195134..195136(-)		WP_011166737.1	N-acetylmannosamine-6-phosphate 2-epimerase	100.0	20.4	58.7
MGA_300	LOCUS_02980	sequence1:195308..195646(-)	internal_stop_codon	195308..195310(-),195134..195136(-)		WP_011166737.1	N-acetylmannosamine-6-phosphate 2-epimerase	96.4	47.3	49.1
MGA_303	LOCUS_03010	sequence1:196578..197204(+)	internal_stop_codon	196563..196565(+)		WP_011166738.1	ROK family protein	88.9	63.2	33.0
MGA_306	LOCUS_03040	sequence1:198091..198645(+)	internal_stop_codon	198649..198651(+),198655..198657(+),198643..198645(+)		WP_011017181.1	N-acetylneuraminate lyase	97.8	62.1	48.3
MGA_307	LOCUS_03050	sequence1:198682..198972(+)	internal_stop_codon	198649..198651(+),198655..198657(+),198643..198645(+)		WP_011017181.1	N-acetylneuraminate lyase	97.9	32.1	43.6
MGA_308	LOCUS_03060	sequence1:198998..199228(+)	internal_stop_codon	199283..199285(+),199226..199228(+)		WP_010956849.1	DNA polymerase IV	84.2	15.7	46.9
MGA_309	LOCUS_03070	sequence1:199304..199993(+)	internal_stop_codon	199283..199285(+),199991..199993(+),199226..199228(+)		WP_011987090.1	DNA polymerase IV	99.1	62.8	31.6
MGA_310	LOCUS_03080	sequence1:200203..200559(+)	internal_stop_codon	200557..200559(+)		WP_010879950.1	nicotinate (nicotinamide) nucleotide adenylyltransferase	91.5	64.9	43.6
MGA_312	LOCUS_03100	sequence1:201791..202117(+)	internal_stop_codon	202115..202117(+)		WP_205842938.1	phosphotriesterase	100.0	30.8	77.8
MGA_313	LOCUS_03110	sequence1:202118..202846(+)	internal_stop_codon	202115..202117(+)		WP_205842938.1	phosphotriesterase	99.6	68.7	90.0
MGA_314	LOCUS_03120	sequence1:203105..203347(+)	internal_stop_codon	202916..202918(+),202994..202996(+),203345..203347(+),203408..203410(+),203585..203587(+),202970..202972(+),203543..203545(+)		WP_010874852.1	PTS ascorbate transporter subunit IIC	77.5	9.2	54.8
MGA_315	LOCUS_03130	sequence1:203993..204451(+)	internal_stop_codon	203918..203920(+),203858..203860(+),204488..204490(+),204506..204508(+),203750..203752(+),204449..204451(+),203894..203896(+)		WP_010874852.1	PTS ascorbate transporter subunit IIC	82.9	19.2	59.1
MGA_317	LOCUS_03150	sequence1:205092..205448(+)	internal_stop_codon	205041..205043(+)		WP_010874850.1	PTS sugar transporter subunit IIA	100.0	74.2	47.5
MGA_318	LOCUS_03160	sequence1:205466..205831(+)	internal_stop_codon	205847..205849(+),205877..205879(+),205916..205918(+),205829..205831(+)		WP_010874849.1	3-dehydro-L-gulonate-6-phosphate decarboxylase	96.7	53.7	46.2
MGA_319	LOCUS_03170	sequence1:206334..206789(+)	internal_stop_codon	206175..206177(+),206952..206954(+),206787..206789(+),206268..206270(+),206871..206873(+)		WP_010874848.1	L-ribulose-5-phosphate 3-epimerase	99.3	49.2	63.3
MGA_320	LOCUS_03180	sequence1:207097..207507(+)	internal_stop_codon	207058..207060(+),207505..207507(+)		WP_010874854.1	L-ribulose-5-phosphate 4-epimerase	99.3	56.2	60.3
MGA_323	LOCUS_03210	sequence1:208082..208510(+)	partial			WP_011949148.1	Cof-type HAD-IIB family hydrolase	81.0	40.0	33.0
MGA_326	LOCUS_03240	sequence1:209300..210562(-)	internal_stop_codon	209300..209302(-)		WP_010874985.1	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	98.8	82.5	49.2
MGA_327	LOCUS_03250	sequence1:210655..210975(-)	internal_stop_codon	210985..210987(-)		WP_001829665.1	phosphoglycerate kinase	70.8	18.9	64.0
MGA_328	LOCUS_03260	sequence1:210985..211518(-)	internal_stop_codon	210985..210987(-),211525..211527(-)		WP_011183475.1	phosphoglycerate kinase	100.0	43.1	59.3
MGA_329	LOCUS_03270	sequence1:211525..211941(-)	internal_stop_codon	211525..211527(-)		WP_002295135.1	phosphoglycerate kinase	99.3	34.3	63.5
MGA_349	LOCUS_03470	sequence1:228353..228640(+)	internal_stop_codon	228638..228640(+)		WP_002362323.1	M42 family metallopeptidase	77.9	20.6	48.6
MGA_350	LOCUS_03480	sequence1:228863..229441(+)	internal_stop_codon	228638..228640(+)		WP_002288096.1	M42 family metallopeptidase	98.4	53.1	35.1
MGA_359	LOCUS_03570	sequence1:235756..236433(-)	internal_stop_codon	236557..236559(-)		WP_048065828.1	M42 family metallopeptidase	94.2	59.8	42.2
MGA_360	LOCUS_03580	sequence1:236557..236820(-)	internal_stop_codon	236557..236559(-)		WP_003723576.1	M42 family metallopeptidase	93.1	22.7	40.7
MGA_362	LOCUS_03600	sequence1:239022..239405(+)	internal_stop_codon	239016..239018(+),238911..238913(+)		WP_004567523.1	sugar ABC transporter permease	97.6	44.1	42.9
MGA_364	LOCUS_03620	sequence1:239780..240067(+)	internal_stop_codon	239732..239734(+),239666..239668(+),240065..240067(+),240071..240073(+),239756..239758(+)		WP_007051830.1	carbohydrate ABC transporter permease	98.9	32.6	43.6
MGA_366	LOCUS_03640	sequence1:240289..240897(+)	partial			WP_011181467.1	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	55.9	30.3	56.1
MGA_373	LOCUS_03710	sequence1:244913..245101(+)	internal_stop_codon	244724..244726(+),244868..244870(+),245279..245281(+),245099..245101(+)		WP_001232748.1	pullulanase	88.7	4.2	45.5
MGA_374	LOCUS_03720	sequence1:245318..245485(+)	internal_stop_codon	245279..245281(+),245516..245518(+),245489..245491(+),245099..245101(+),245483..245485(+)		WP_010965967.1	type I pullulanase	98.2	7.5	53.7
MGA_380	LOCUS_03780	sequence1:248079..248951(+)	internal_stop_codon	249132..249134(+),248949..248951(+)		WP_010990086.1	glycoside hydrolase family 65 protein	77.2	29.5	30.4
MGA_381	LOCUS_03790	sequence1:249543..250166(+)	internal_stop_codon	249492..249494(+),250245..250247(+),250164..250166(+)		WP_011861487.1	glycoside hydrolase family 65 protein	98.6	25.8	30.9
MGA_383	LOCUS_03810	sequence1:250745..251086(+)	internal_stop_codon	250487..250489(+)		WP_003549628.1	beta-phosphoglucomutase	100.0	50.2	43.4
MGA_388	LOCUS_03860	sequence1:254243..254806(+)	internal_stop_codon	254804..254806(+),254111..254113(+)		WP_010963512.1	N-acetylglucosamine-6-phosphate deacetylase	87.2	41.7	37.6
MGA_396	LOCUS_03940	sequence1:259478..259813(-)	internal_stop_codon	260024..260026(-),259955..259957(-),259478..259480(-)		WP_015545356.1	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	95.5	22.1	56.6
MGA_397	LOCUS_03950	sequence1:260024..260368(-)	internal_stop_codon	260024..260026(-),259955..259957(-)		WP_011183060.1	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	96.5	23.0	55.5
MGA_398	LOCUS_03960	sequence1:260544..260768(-)	internal_stop_codon	260394..260396(-),260544..260546(-),260478..260480(-),260778..260780(-)		WP_052846522.1	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA	86.5	13.6	45.3
MGA_399	LOCUS_03970	sequence1:260778..261221(-)	internal_stop_codon	261360..261362(-),260544..260546(-),260778..260780(-)		WP_011183059.1	amidase family protein	97.3	30.9	36.9
MGA_403	LOCUS_04010	sequence1:262922..263803(+)	internal_stop_codon	263801..263803(+)		WP_010990134.1	molecular chaperone DnaJ	99.0	77.5	42.8
MGA_405	LOCUS_04030	sequence1:264284..264826(+)	internal_stop_codon	264824..264826(+)		WP_011125790.1	DNA-directed RNA polymerase subunit beta	87.8	13.8	39.9
MGA_406	LOCUS_04040	sequence1:264917..265420(+)	internal_stop_codon	264824..264826(+),265418..265420(+)		WP_002936570.1	DNA-directed RNA polymerase subunit beta	99.4	13.7	32.2
MGA_407	LOCUS_04050	sequence1:265436..266059(+)	internal_stop_codon	266057..266059(+),265418..265420(+)		WP_011183496.1	DNA-directed RNA polymerase subunit beta	95.7	15.4	54.0
MGA_408	LOCUS_04060	sequence1:266222..266644(+)	internal_stop_codon	266642..266644(+),266057..266059(+)		WP_011167152.1	DNA-directed RNA polymerase subunit beta	100.0	10.8	59.3
MGA_409	LOCUS_04070	sequence1:266867..267589(+)	internal_stop_codon	267587..267589(+),266642..266644(+)		WP_003130544.1	DNA-directed RNA polymerase subunit beta	99.6	20.0	64.0
MGA_411	LOCUS_04090	sequence1:268481..268900(+)	internal_stop_codon	268898..268900(+)		WP_011167153.1	DNA-directed RNA polymerase subunit beta'	84.2	8.4	43.7
MGA_412	LOCUS_04100	sequence1:268919..269197(+)	internal_stop_codon	269195..269197(+),269282..269284(+),268898..268900(+)		WP_011183495.1	DNA-directed RNA polymerase subunit beta'	98.9	7.2	73.6
MGA_413	LOCUS_04110	sequence1:269342..270250(+)	internal_stop_codon	270476..270478(+),269195..269197(+),269282..269284(+)		WP_000567939.1	DNA-directed RNA polymerase subunit beta'	70.9	17.5	49.1
MGA_414	LOCUS_04120	sequence1:270278..270478(+)	internal_stop_codon	270476..270478(+)		WP_002438689.1	DNA-directed RNA polymerase subunit beta'	98.5	5.4	43.1
MGA_415	LOCUS_04130	sequence1:270551..270934(+)	internal_stop_codon	270476..270478(+),270932..270934(+)		WP_011167153.1	DNA-directed RNA polymerase subunit beta'	100.0	9.1	61.4
MGA_416	LOCUS_04140	sequence1:271568..272071(+)	partial			WP_003536196.1	DNA-directed RNA polymerase subunit beta'	79.6	9.5	49.6
MGA_418	LOCUS_04160	sequence1:273206..273538(+)	internal_stop_codon	273146..273148(+)		WP_003638098.1	50S ribosomal protein L13	98.2	73.5	59.3
MGA_419	LOCUS_04170	sequence1:273538..273720(+)	internal_stop_codon	273718..273720(+)		WP_001829714.1	30S ribosomal protein S9	95.0	43.8	54.4
MGA_422	LOCUS_04200	sequence1:275157..275696(+)	internal_stop_codon	275694..275696(+)		WP_001092527.1	ribonuclease HIII	93.9	55.6	32.6
MGA_424	LOCUS_04220	sequence1:277329..278126(+)	internal_stop_codon	277134..277136(+)		WP_011182941.1	acetate kinase	99.2	66.2	48.7
MGA_426	LOCUS_04240	sequence1:278745..279515(+)	partial			WP_000701298.1	peptidase domain-containing ABC transporter	75.0	26.5	25.9
MGA_427	LOCUS_04250	sequence1:279567..280673(+)	partial			WP_000136732.1	ABC transporter ATP-binding protein	95.4	61.0	22.7
MGA_430	LOCUS_04280	sequence1:281377..281577(+)	internal_stop_codon	281344..281346(+)		WP_011016624.1	rRNA maturation RNase YbeY	100.0	40.7	43.9
MGA_440	LOCUS_04380	sequence1:286160..287041(-)	partial			WP_014748675.1	DNA polymerase I	91.1	30.4	35.8
MGA_441	LOCUS_04390	sequence1:287318..289048(-)	internal_stop_codon	289115..289117(-)		WP_000673740.1	DNA polymerase III subunit alpha	88.4	46.0	39.7
MGA_442	LOCUS_04400	sequence1:289115..289954(-)	internal_stop_codon	289115..289117(-)		WP_011166855.1	DNA polymerase III subunit alpha	95.7	28.6	31.1
MGA_448	LOCUS_04460	sequence1:292934..293176(-)	internal_stop_codon	292874..292876(-),293303..293305(-),292934..292936(-)		WP_129622721.1	aminotransferase class V-fold PLP-dependent enzyme	90.0	18.6	50.0
MGA_449	LOCUS_04470	sequence1:293303..293656(-)	internal_stop_codon	293303..293305(-)		WP_129622721.1	aminotransferase class V-fold PLP-dependent enzyme	98.3	30.0	46.6
MGA_455	LOCUS_04530	sequence1:297158..297364(+)	internal_stop_codon	297365..297367(+),297362..297364(+)		WP_002656292.1	RNA polymerase sigma factor RpoD	100.0	11.4	62.5
MGA_456	LOCUS_04540	sequence1:297431..297943(+)	internal_stop_codon	297365..297367(+),297362..297364(+)		WP_003226225.1	RNA polymerase sigma factor RpoD	97.6	42.3	45.8
MGA_457	LOCUS_04550	sequence1:297993..298529(+)	internal_stop_codon	298527..298529(+),298536..298538(+),297984..297986(+)		WP_011166652.1	Nif3-like dinuclear metal center hexameric protein	93.3	65.9	33.9
MGA_458	LOCUS_04560	sequence1:298713..299255(+)	internal_stop_codon	299253..299255(+)		WP_011166314.1	deoxyribonuclease IV	99.4	64.0	45.5
MGA_459	LOCUS_04570	sequence1:299271..299540(+)	internal_stop_codon	299253..299255(+)		WP_011166314.1	deoxyribonuclease IV	100.0	30.8	49.4
MGA_460	LOCUS_04580	sequence1:299795..300193(-)	internal_stop_codon	300341..300343(-),300275..300277(-),300416..300418(-),300215..300217(-),300461..300463(-),299795..299797(-)		WP_000134141.1	methionine--tRNA ligase	100.0	20.0	33.3
MGA_461	LOCUS_04590	sequence1:300587..300775(-)	internal_stop_codon	300584..300586(-),300341..300343(-),301016..301018(-),300416..300418(-),300587..300589(-),300461..300463(-),300860..300862(-)		WP_000136757.1	methionine--tRNA ligase	96.8	9.9	48.5
MGA_462	LOCUS_04600	sequence1:300860..300994(-)	internal_stop_codon	300860..300862(-),301016..301018(-)		WP_003733137.1	methionine--tRNA ligase	100.0	6.6	59.1
MGA_477	LOCUS_04750	sequence1:308832..309062(+)	frameshift,internal_stop_codon	308824..308826(+)	308801,308780	WP_012583616.1	division/cell wall cluster transcriptional repressor MraZ	90.8	47.3	33.3
MGA_489	LOCUS_04870	sequence1:316239..316478(+)	internal_stop_codon	316476..316478(+)		WP_010874978.1	RNase J family beta-CASP ribonuclease	98.7	13.9	51.3
MGA_494	LOCUS_04920	sequence1:319165..319641(+)	internal_stop_codon	319159..319161(+),319639..319641(+)		WP_012583495.1	triose-phosphate isomerase	100.0	63.5	49.7
MGA_495	LOCUS_04930	sequence1:319729..319863(+)	internal_stop_codon	319639..319641(+)		WP_009930392.1	triose-phosphate isomerase	90.9	15.9	72.5
MGA_501	LOCUS_04990	sequence1:322039..323046(+)	internal_stop_codon	323044..323046(+)		WP_003226825.1	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	98.8	52.7	50.5
MGA_502	LOCUS_05000	sequence1:323086..323712(+)	internal_stop_codon	323044..323046(+),323710..323712(+)		WP_010966993.1	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	100.0	35.5	45.1
MGA_506	LOCUS_05040	sequence1:325450..325725(+)	internal_stop_codon	325723..325725(+)		WP_005694505.1	tryptophan--tRNA ligase	98.9	26.9	53.3
MGA_507	LOCUS_05050	sequence1:325747..326439(+)	internal_stop_codon	325723..325725(+)		WP_011166551.1	tryptophan--tRNA ligase	99.6	68.8	49.6
MGA_508	LOCUS_05060	sequence1:326439..326867(+)	internal_stop_codon	327102..327104(+),326865..326867(+),326916..326918(+)		WP_012583388.1	threonine--tRNA ligase	94.4	20.7	45.0
MGA_509	LOCUS_05070	sequence1:326934..327104(+)	internal_stop_codon	327102..327104(+),326865..326867(+),327180..327182(+),326916..326918(+)		WP_003229473.1	threonine--tRNA ligase	96.4	8.4	51.9
MGA_510	LOCUS_05080	sequence1:327201..327569(+)	internal_stop_codon	326916..326918(+),327180..327182(+),327567..327569(+),327102..327104(+)		WP_011183074.1	threonine--tRNA ligase	100.0	19.4	54.4
MGA_511	LOCUS_05090	sequence1:327705..327875(+)	internal_stop_codon	327873..327875(+),327567..327569(+)		WP_011183074.1	threonine--tRNA ligase	98.2	8.5	70.9
MGA_512	LOCUS_05100	sequence1:327876..328181(+)	internal_stop_codon	327873..327875(+)		WP_000435143.1	threonine--tRNA ligase	79.2	12.4	48.8
MGA_518	LOCUS_05160	sequence1:331221..331604(-)	internal_stop_codon	331644..331646(-)		WP_010874413.1	ABC transporter permease	92.9	41.6	35.8
MGA_521	LOCUS_05190	sequence1:332068..332373(-)	internal_stop_codon	332437..332439(-)		WP_010964158.1	ABC transporter ATP-binding protein	82.2	23.9	35.7
MGA_522	LOCUS_05200	sequence1:332437..332796(-)	internal_stop_codon	332437..332439(-)		WP_003705023.1	ABC transporter ATP-binding protein	99.2	32.6	55.1
MGA_523	LOCUS_05210	sequence1:333229..333435(-)	internal_stop_codon	333229..333231(-)		WP_008762997.1	polyamine ABC transporter ATP-binding protein	85.3	12.5	56.9
MGA_527	LOCUS_05250	sequence1:335520..336530(-)	partial			WP_010874510.1	AAA domain-containing protein	33.6	10.2	38.1
MGA_529	LOCUS_05270	sequence1:337088..338758(-)	internal_stop_codon	338795..338797(-)		WP_003130831.1	DNA primase	61.9	54.3	34.6
MGA_530	LOCUS_05280	sequence1:338917..339390(-)	internal_stop_codon	339430..339432(-)		WP_010966472.1	glycine--tRNA ligase	98.1	33.1	53.2
MGA_531	LOCUS_05290	sequence1:339430..339834(-)	internal_stop_codon	339430..339432(-),339859..339861(-),340051..340053(-)		WP_011183165.1	glycine--tRNA ligase	100.0	29.9	68.9
MGA_534	LOCUS_05320	sequence1:340793..341197(-)	internal_stop_codon	341312..341314(-),340634..340636(-),340793..340795(-),340682..340684(-)		WP_003245397.1	transketolase	99.3	20.4	56.6
MGA_535	LOCUS_05330	sequence1:341540..341752(-)	internal_stop_codon	341540..341542(-),341450..341452(-),341312..341314(-)		WP_002295818.1	transketolase	85.7	9.3	62.9
MGA_536	LOCUS_05340	sequence1:342185..342358(-)	internal_stop_codon	342185..342187(-)		WP_011183246.1	transketolase	86.0	7.5	63.3
MGA_538	LOCUS_05360	sequence1:342665..342844(-)	internal_stop_codon	342929..342931(-)		WP_011166635.1	elongation factor P	96.6	31.0	59.6
MGA_539	LOCUS_05370	sequence1:342929..343228(-)	internal_stop_codon	342929..342931(-)		WP_000626507.1	elongation factor P	100.0	53.5	50.5
MGA_541	LOCUS_05390	sequence1:344143..344394(-)	internal_stop_codon	344458..344460(-),344143..344145(-)		WP_010964370.1	SPFH domain-containing protein	90.4	23.3	60.0
MGA_542	LOCUS_05400	sequence1:344458..344928(-)	internal_stop_codon	344458..344460(-)		WP_011015666.1	SPFH domain-containing protein	91.0	48.3	57.0
MGA_543	LOCUS_05410	sequence1:345535..345690(-)	internal_stop_codon	345808..345810(-)		WP_001038006.1	tRNA 2-thiouridine(34) synthase MnmA	100.0	13.7	45.1
MGA_544	LOCUS_05420	sequence1:345808..346254(-)	internal_stop_codon	346465..346467(-),346393..346395(-),346537..346539(-),345808..345810(-)		WP_202943733.1	tRNA 2-thiouridine(34) synthase MnmA	98.6	40.3	64.5
MGA_546	LOCUS_05440	sequence1:347039..347902(-)	partial			WP_011182916.1	ABC transporter ATP-binding protein	90.2	43.5	45.2
MGA_565	LOCUS_05630	sequence1:359265..359540(-)	internal_stop_codon	359595..359597(-),359691..359693(-)		WP_001831892.1	mannose-6-phosphate isomerase, class I	80.2	25.6	40.7
MGA_567	LOCUS_05650	sequence1:360357..360932(-)	internal_stop_codon	361047..361049(-),360936..360938(-)		WP_005478109.1	fructose-specific PTS transporter subunit EIIC	97.4	27.7	46.3
MGA_569	LOCUS_05670	sequence1:361290..361970(-)	internal_stop_codon	361290..361292(-),362040..362042(-)		WP_000704632.1	PTS fructose transporter subunit IIABC	93.4	33.9	37.7
MGA_570	LOCUS_05680	sequence1:362040..362297(-)	internal_stop_codon	362040..362042(-)		WP_009897772.1	PTS sugar transporter subunit IIA	97.6	55.3	42.2
MGA_572	LOCUS_05700	sequence1:362992..363306(-)	frameshift		362997	WP_013099400.1	ATPase RavA stimulator ViaA	97.1	21.5	33.3
MGA_577	LOCUS_05750	sequence1:365182..365523(-)	internal_stop_codon	365182..365184(-),365029..365031(-)		WP_001299914.1	ATPase RavA	98.2	22.5	50.0
MGA_580	LOCUS_05780	sequence1:366868..367788(-)	internal_stop_codon	366868..366870(-),367828..367830(-),367816..367818(-)		WP_011836973.1	type I DNA topoisomerase	100.0	45.2	36.0
MGA_581	LOCUS_05790	sequence1:367828..368124(-)	internal_stop_codon	368326..368328(-),367828..367830(-),367816..367818(-)		WP_000681408.1	type I DNA topoisomerase	99.0	13.0	51.5
MGA_582	LOCUS_05800	sequence1:368326..368481(-)	internal_stop_codon	368326..368328(-)		WP_010931749.1	type I DNA topoisomerase	96.1	5.8	57.1
MGA_583	LOCUS_05810	sequence1:368785..369036(+)	internal_stop_codon	369034..369036(+)		WP_011016560.1	type I glyceraldehyde-3-phosphate dehydrogenase	97.6	24.2	65.4
MGA_584	LOCUS_05820	sequence1:369301..369711(+)	internal_stop_codon	369034..369036(+),369709..369711(+)		WP_010874786.1	type I glyceraldehyde-3-phosphate dehydrogenase	99.3	40.1	68.1
MGA_585	LOCUS_05830	sequence1:369962..370609(-)	internal_stop_codon	370685..370687(-)		WP_002556631.1	YebC/PmpR family DNA-binding transcriptional regulator	97.2	84.4	41.6
MGA_586	LOCUS_05840	sequence1:370904..371290(-)	internal_stop_codon	370904..370906(-),371417..371419(-)		WP_011183419.1	NAD(+) synthase	100.0	54.1	51.5
MGA_588	LOCUS_05860	sequence1:372240..372845(-)	internal_stop_codon	372240..372242(-),372222..372224(-)		WP_011016280.1	tRNA (guanosine(37)-N1)-methyltransferase TrmD	99.0	83.2	54.3
MGA_589	LOCUS_05870	sequence1:372963..373130(-)	internal_stop_codon	372963..372965(-)		WP_003564756.1	30S ribosomal protein S16	72.7	44.0	77.5
MGA_590	LOCUS_05880	sequence1:373206..373403(-)	internal_stop_codon	373497..373499(-),373473..373475(-)		WP_012545963.1	NAD-dependent DNA ligase LigA	93.8	9.1	45.9
MGA_591	LOCUS_05890	sequence1:373497..375116(-)	internal_stop_codon	373497..373499(-),375150..375152(-),373473..373475(-)		WP_011166932.1	NAD-dependent DNA ligase LigA	94.4	76.8	44.0
MGA_592	LOCUS_05900	sequence1:375408..375776(-)	frameshift,internal_stop_codon	375408..375410(-),375402..375404(-)	375323	WP_011183051.1	energy-coupling factor transporter transmembrane component T	100.0	36.7	63.9
MGA_596	LOCUS_05940	sequence1:376448..377128(-)	internal_stop_codon	376448..376450(-)		WP_011837718.1	energy-coupling factor transporter ATPase	99.1	74.6	47.3
MGA_597	LOCUS_05950	sequence1:377119..377919(-)	partial			WP_011183049.1	energy-coupling factor transporter ATPase	99.6	66.0	49.8
MGA_598	LOCUS_05960	sequence1:378305..379054(-)	internal_stop_codon	378266..378268(-),379262..379264(-),378305..378307(-),379061..379063(-)		WP_011166460.1	FAD-dependent oxidoreductase	94.0	51.5	42.8
MGA_599	LOCUS_05970	sequence1:379620..380318(+)	internal_stop_codon	380316..380318(+)		WP_011861285.1	lipoate--protein ligase	86.2	60.7	47.0
MGA_600	LOCUS_05980	sequence1:380409..380594(+)	internal_stop_codon	380316..380318(+)		WP_003721881.1	lipoate protein ligase LplA2	98.4	18.2	40.0
MGA_604	LOCUS_06020	sequence1:383917..384666(+)	internal_stop_codon	384664..384666(+)		WP_002858710.1	serine hydroxymethyltransferase	98.0	58.9	62.3
MGA_605	LOCUS_06030	sequence1:384853..385167(+)	internal_stop_codon	384664..384666(+)		WP_002468313.1	serine hydroxymethyltransferase	92.3	23.3	51.0
MGA_615	LOCUS_06130	sequence1:391302..392159(-)	internal_stop_codon	391302..391304(-)		WP_003732286.1	recombinase RecA	98.2	80.5	61.4
MGA_618	LOCUS_06160	sequence1:393146..393601(-)	internal_stop_codon	393146..393148(-),393137..393139(-)		WP_003132395.1	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	89.4	54.5	39.3
MGA_621	LOCUS_06190	sequence1:394373..394795(-)	internal_stop_codon	394157..394159(-),394313..394315(-),394163..394165(-),394373..394375(-)		WP_011182984.1	cysteine--tRNA ligase	95.7	30.6	37.0
MGA_643	LOCUS_06410	sequence1:408141..408611(-)	internal_stop_codon	408627..408629(-),408615..408617(-)		WP_002352359.1	aspartate--tRNA ligase	98.1	26.1	50.3
MGA_644	LOCUS_06420	sequence1:408627..409715(-)	internal_stop_codon	408627..408629(-),408615..408617(-),409779..409781(-)		WP_011183263.1	aspartate--tRNA ligase	96.1	61.7	44.0
MGA_646	LOCUS_06440	sequence1:411254..411640(-)	internal_stop_codon	411662..411664(-),411224..411226(-),411254..411256(-)		WP_001119070.1	protein translocase subunit SecDF	100.0	16.6	44.5
MGA_647	LOCUS_06450	sequence1:411827..412903(-)	internal_stop_codon	411662..411664(-),411827..411829(-)		WP_002485294.1	protein translocase subunit SecDF	84.6	39.7	33.2
MGA_649	LOCUS_06470	sequence1:414643..414828(+)	internal_stop_codon	414826..414828(+)		WP_003640557.1	DNA topoisomerase IV subunit B	59.0	5.4	77.8
MGA_650	LOCUS_06480	sequence1:414892..415212(+)	internal_stop_codon	414826..414828(+),415210..415212(+)		WP_004080806.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	100.0	16.8	54.2
MGA_651	LOCUS_06490	sequence1:415288..415782(+)	internal_stop_codon	415780..415782(+),415210..415212(+)		WP_003231552.1	DNA topoisomerase IV subunit B	100.0	25.0	50.3
MGA_652	LOCUS_06500	sequence1:415972..416358(+)	internal_stop_codon	416356..416358(+),416572..416574(+),416452..416454(+),415780..415782(+)		WP_003640557.1	DNA topoisomerase IV subunit B	99.2	19.0	69.3
MGA_653	LOCUS_06510	sequence1:416646..416807(+)	internal_stop_codon	416934..416936(+),416805..416807(+)		WP_002352284.1	DNA topoisomerase IV subunit A	81.1	5.3	81.4
MGA_654	LOCUS_06520	sequence1:416961..418370(+)	internal_stop_codon	416934..416936(+),418368..418370(+),416805..416807(+)		WP_003231550.1	DNA topoisomerase IV subunit A	99.1	57.7	42.1
MGA_655	LOCUS_06530	sequence1:418476..418934(+)	internal_stop_codon	418368..418370(+)		WP_003641633.1	DNA gyrase subunit A	86.8	15.4	33.1
MGA_657	LOCUS_06550	sequence1:419441..419611(+)	internal_stop_codon	419651..419653(+),419699..419701(+),419417..419419(+),419609..419611(+)		WP_010874884.1	inorganic diphosphatase	96.4	29.3	50.0
MGA_659	LOCUS_06570	sequence1:420511..421302(+)	internal_stop_codon	421300..421302(+)		WP_005903189.1	Holliday junction branch migration DNA helicase RuvB	97.0	76.8	43.9
MGA_660	LOCUS_06580	sequence1:421571..421771(-)	internal_stop_codon	421835..421837(-)		WP_000284908.1	aspartate--ammonia ligase	98.5	19.9	60.0
MGA_661	LOCUS_06590	sequence1:422150..422500(-)	internal_stop_codon	422150..422152(-),422144..422146(-)		WP_011949062.1	aspartate--ammonia ligase	99.1	34.4	63.2
MGA_665	LOCUS_06630	sequence1:424574..425005(+)	internal_stop_codon	425003..425005(+)		WP_011460204.1	(d)CMP kinase	99.3	61.6	43.8
MGA_666	LOCUS_06640	sequence1:425244..425384(+)	internal_stop_codon	425382..425384(+)		WP_011986848.1	ribosome biogenesis GTPase Der	89.1	9.3	82.9
MGA_667	LOCUS_06650	sequence1:425556..426116(+)	internal_stop_codon	426192..426194(+),426114..426116(+),425382..425384(+)		WP_011166596.1	ribosome biogenesis GTPase Der	100.0	43.4	44.4
MGA_668	LOCUS_06660	sequence1:426318..426545(+)	internal_stop_codon	426192..426194(+),426114..426116(+)		WP_011392835.1	ribosome biogenesis GTPase Der	98.7	16.9	41.9
MGA_669	LOCUS_06670	sequence1:427698..427961(+)	internal_stop_codon	427611..427613(+),427959..427961(+)		WP_011475734.1	oligoendopeptidase F	100.0	14.4	47.1
MGA_670	LOCUS_06680	sequence1:427992..428282(+)	internal_stop_codon	427959..427961(+),428280..428282(+)		WP_000003393.1	oligoendopeptidase F	51.0	8.1	53.1
MGA_671	LOCUS_06690	sequence1:428467..428595(+)	internal_stop_codon	428593..428595(+)		WP_011035465.1	tRNA (cytidine(34)-2'-O)-methyltransferase	92.9	24.7	59.0
MGA_672	LOCUS_06700	sequence1:428644..428991(+)	internal_stop_codon	428593..428595(+)		WP_011166791.1	tRNA (cytidine(34)-2'-O)-methyltransferase	96.5	60.2	42.3
MGA_684	LOCUS_06820	sequence1:433601..433924(-)	internal_stop_codon	433316..433318(-),433958..433960(-),433601..433603(-)		WP_011183374.1	proline--tRNA ligase	98.1	21.8	44.8
MGA_685	LOCUS_06830	sequence1:433958..434203(-)	internal_stop_codon	434324..434326(-),433958..433960(-),434306..434308(-),434261..434263(-)		WP_011166523.1	proline--tRNA ligase	100.0	17.1	55.6
MGA_686	LOCUS_06840	sequence1:434324..434527(-)	internal_stop_codon	434594..434596(-),434324..434326(-),434306..434308(-),434705..434707(-),434261..434263(-),434684..434686(-)		WP_011166523.1	proline--tRNA ligase	100.0	14.1	64.2
MGA_687	LOCUS_06850	sequence1:434994..435362(-)	internal_stop_codon	435411..435413(-)		WP_004080719.1	phosphopyruvate hydratase	96.7	27.5	70.3
MGA_688	LOCUS_06860	sequence1:435411..436082(-)	internal_stop_codon	435411..435413(-),436182..436184(-)		WP_010942923.1	phosphopyruvate hydratase	99.6	47.0	54.1
MGA_689	LOCUS_06870	sequence1:436182..436367(-)	internal_stop_codon	436182..436184(-)		WP_010880276.1	phosphopyruvate hydratase	86.9	12.4	77.4
MGA_690	LOCUS_06880	sequence1:436527..437225(-)	internal_stop_codon	437322..437324(-),437298..437300(-)		WP_011183458.1	translation elongation factor Ts	97.0	77.4	47.4
MGA_692	LOCUS_06900	sequence1:437444..437968(-)	internal_stop_codon	438020..438022(-),438239..438241(-)		WP_003220918.1	30S ribosomal protein S2	64.9	46.3	43.0
MGA_693	LOCUS_06910	sequence1:438020..438229(-)	internal_stop_codon	438020..438022(-),438239..438241(-)		WP_011057525.1	30S ribosomal protein S2	100.0	26.2	49.3
MGA_696	LOCUS_06940	sequence1:439577..440512(-)	internal_stop_codon	439577..439579(-)		WP_000673090.1	DEAD/DEAH box helicase	99.7	58.3	47.4
MGA_699	LOCUS_06970	sequence1:441613..442800(-)	partial			WP_000908969.1	phenylalanine--tRNA ligase subunit beta	95.4	47.9	29.2
MGA_700	LOCUS_06980	sequence1:442813..442974(-)	internal_stop_codon	443116..443118(-)		WP_004398818.1	phenylalanine--tRNA ligase subunit alpha	100.0	15.7	61.1
MGA_702	LOCUS_07000	sequence1:443116..443334(-)	internal_stop_codon	443116..443118(-),443437..443439(-)		WP_011183298.1	phenylalanine--tRNA ligase subunit alpha	98.6	22.0	42.9
MGA_705	LOCUS_07030	sequence1:445547..445780(-)	internal_stop_codon	445433..445435(-),445547..445549(-)		WP_010948062.1	glycerol-3-phosphate 1-O-acyltransferase PlsY	98.7	25.6	44.7
MGA_722	LOCUS_07200	sequence1:453627..454238(+)	internal_stop_codon	454236..454238(+),454257..454259(+)		WP_011183314.1	molecular chaperone DnaK	100.0	34.3	71.4
MGA_723	LOCUS_07210	sequence1:454260..455423(+)	internal_stop_codon	454236..454238(+),454257..454259(+)		WP_011183314.1	molecular chaperone DnaK	98.4	63.9	56.4
MGA_724	LOCUS_07220	sequence1:455549..456634(-)	internal_stop_codon	456773..456775(-),455549..455551(-),456641..456643(-)		WP_011166465.1	dihydrolipoyl dehydrogenase	99.4	61.7	41.7
MGA_725	LOCUS_07230	sequence1:456773..457345(-)	internal_stop_codon	456773..456775(-),456641..456643(-)		WP_011182939.1	dihydrolipoyl dehydrogenase	100.0	28.1	47.6
MGA_726	LOCUS_07240	sequence1:457542..457922(-)	internal_stop_codon	457428..457430(-),457542..457544(-)		WP_010903647.1	dihydrolipoamide acetyltransferase family protein	88.9	23.4	49.1
MGA_727	LOCUS_07250	sequence1:457980..458270(-)	internal_stop_codon	457980..457982(-),457926..457928(-)		WP_015064873.1	dihydrolipoamide acetyltransferase family protein	71.9	18.6	41.6
MGA_728	LOCUS_07260	sequence1:458583..459089(-)	internal_stop_codon	459114..459116(-),458583..458585(-),459195..459197(-),458385..458387(-)		WP_011182937.1	alpha-ketoacid dehydrogenase subunit beta	98.2	50.2	60.0
MGA_729	LOCUS_07270	sequence1:459620..459742(-)	internal_stop_codon	459620..459622(-),459845..459847(-),459839..459841(-),459806..459808(-),459467..459469(-),459542..459544(-)		WP_011182936.1	pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha	97.5	10.5	74.4
MGA_730	LOCUS_07280	sequence1:460127..460414(-)	internal_stop_codon	460052..460054(-),460127..460129(-),459845..459847(-),459839..459841(-)		WP_011182936.1	pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha	93.7	23.5	42.7
MGA_731	LOCUS_07290	sequence1:460573..460878(-)	internal_stop_codon	460915..460917(-)		WP_011249918.1	Xaa-Pro dipeptidase PepQ	89.1	25.9	55.6
MGA_732	LOCUS_07300	sequence1:460915..461337(-)	internal_stop_codon	460915..460917(-)		WP_012583399.1	Xaa-Pro peptidase family protein	89.3	35.9	37.8
MGA_733	LOCUS_07310	sequence1:462141..462803(-)	internal_stop_codon	462141..462143(-),462828..462830(-),462906..462908(-)		WP_000665727.1	sodium:solute symporter	96.8	39.6	36.9
MGA_734	LOCUS_07320	sequence1:462906..463208(-)	internal_stop_codon	463377..463379(-),463218..463220(-),462906..462908(-),463431..463433(-),462828..462830(-),463212..463214(-)		WP_011119311.1	sodium/solute symporter	98.0	10.4	37.8
MGA_739	LOCUS_07370	sequence1:465303..466325(+)	internal_stop_codon	466593..466595(+),466323..466325(+)		WP_011166726.1	dihydrolipoyl dehydrogenase	98.5	72.8	43.9
MGA_744	LOCUS_07420	sequence1:469305..469895(+)	internal_stop_codon	469260..469262(+)		WP_011183281.1	lysophospholipid acyltransferase family protein	94.9	47.9	34.4
MGA_746	LOCUS_07440	sequence1:470966..471232(+)	partial			WP_028842431.1	SMC-Scp complex subunit ScpB	73.9	35.5	47.7
MGA_747	LOCUS_07450	sequence1:471253..471408(+)	internal_stop_codon	471631..471633(+),471490..471492(+),471406..471408(+),471433..471435(+)		WP_010972021.1	thymidylate synthase	100.0	19.3	70.6
MGA_748	LOCUS_07460	sequence1:471745..472116(+)	internal_stop_codon	471490..471492(+),471721..471723(+),471631..471633(+)		WP_010874676.1	thymidylate synthase	100.0	42.9	76.4
MGA_749	LOCUS_07470	sequence1:472410..472592(+)	internal_stop_codon	472131..472133(+),472179..472181(+),472317..472319(+)		WP_010874677.1	dihydrofolate reductase	95.0	35.0	54.4
MGA_754	LOCUS_07520	sequence1:475472..475903(-)	partial			WP_001227709.1	glucose-specific PTS transporter subunit IIBC	97.9	20.0	41.4
MGA_756	LOCUS_07540	sequence1:476549..476857(-)	internal_stop_codon	477152..477154(-),476405..476407(-),477017..477019(-),476408..476410(-),476549..476551(-)		WP_010874564.1	PTS transporter subunit IIABC	78.4	8.5	50.0
MGA_759	LOCUS_07570	sequence1:477413..477856(-)	internal_stop_codon	477158..477160(-),477413..477415(-),477152..477154(-),477284..477286(-)		WP_020862982.1	PTS transporter subunit EIIC	83.7	15.2	37.4
MGA_765	LOCUS_07630	sequence1:483323..483880(-)	internal_stop_codon	483323..483325(-)		WP_010874901.1	DUF2779 domain-containing protein	97.8	25.8	32.1
MGA_772	LOCUS_07700	sequence1:487372..487563(-)	internal_stop_codon	487336..487338(-),487735..487737(-),487372..487374(-)		WP_010963557.1	fructose-specific PTS transporter subunit EIIC	96.8	11.6	50.8
MGA_773	LOCUS_07710	sequence1:487957..488523(-)	internal_stop_codon	487879..487881(-),487735..487737(-),487957..487959(-),488623..488625(-)		WP_010874435.1	fructose-specific PTS transporter subunit EIIC	99.5	26.8	45.8
MGA_777	LOCUS_07750	sequence1:490082..490501(+)	internal_stop_codon	490499..490501(+)		WP_003546735.1	peptide chain release factor 1	100.0	38.5	43.6
MGA_778	LOCUS_07760	sequence1:490517..491158(+)	internal_stop_codon	490499..490501(+)		WP_011183530.1	peptide chain release factor 1	97.2	57.3	63.6
MGA_779	LOCUS_07770	sequence1:491160..491771(+)	partial			WP_011475835.1	peptide chain release factor N(5)-glutamine methyltransferase	96.6	72.0	41.6
MGA_783	LOCUS_07810	sequence1:492868..493341(-)	internal_stop_codon	493435..493437(-),493486..493488(-)		WP_002263210.1	phosphopentomutase	100.0	39.0	45.6
MGA_784	LOCUS_07820	sequence1:493486..493788(-)	internal_stop_codon	493435..493437(-),493792..493794(-),493486..493488(-)		WP_001046079.1	phosphopentomutase	94.0	23.4	52.1
MGA_785	LOCUS_07830	sequence1:493792..494067(-)	internal_stop_codon	493792..493794(-)		WP_011707411.1	phosphopentomutase	94.5	24.4	34.3
MGA_789	LOCUS_07870	sequence1:497020..497310(+)	internal_stop_codon	497587..497589(+),497308..497310(+)		WP_005903528.1	isoleucine--tRNA ligase	100.0	10.3	63.5
MGA_790	LOCUS_07880	sequence1:497341..497589(+)	internal_stop_codon	497722..497724(+),497587..497589(+),497737..497739(+),497308..497310(+)		WP_000384691.1	isoleucine--tRNA ligase	87.8	7.9	51.4
MGA_791	LOCUS_07890	sequence1:498007..498225(+)	internal_stop_codon	498382..498384(+),498406..498408(+),498514..498516(+),497722..497724(+),497863..497865(+),497737..497739(+),498337..498339(+),498265..498267(+),498223..498225(+)		WP_011183288.1	isoleucine--tRNA ligase	94.4	7.9	47.2
MGA_795	LOCUS_07930	sequence1:500962..501249(-)	internal_stop_codon	501274..501276(-),500962..500964(-)		WP_019080571.1	cation-transporting P-type ATPase	100.0	10.5	61.1
MGA_796	LOCUS_07940	sequence1:501274..501831(-)	internal_stop_codon	502009..502011(-),501844..501846(-),501925..501927(-),501274..501276(-)		WP_002355749.1	calcium-translocating P-type ATPase, PMCA-type	100.0	21.1	53.2
MGA_798	LOCUS_07960	sequence1:502336..503082(-)	internal_stop_codon	502234..502236(-),502336..502338(-)		WP_002377094.1	cation-translocating P-type ATPase	96.4	24.8	37.7
MGA_799	LOCUS_07970	sequence1:503084..503632(-)	internal_stop_codon	503696..503698(-)		WP_005788170.1	CTP synthase	98.4	33.8	41.4
MGA_800	LOCUS_07980	sequence1:503696..504682(-)	internal_stop_codon	503696..503698(-)		WP_002286999.1	CTP synthase	99.4	60.6	47.9
MGA_801	LOCUS_07990	sequence1:504843..505466(+)	internal_stop_codon	505464..505466(+)		WP_000166106.1	NAD(P)H-dependent glycerol-3-phosphate dehydrogenase	98.6	60.1	34.1
MGA_802	LOCUS_08000	sequence1:505479..505811(+)	internal_stop_codon	505809..505811(+),505464..505466(+)		WP_000415108.1	NAD(P)H-dependent glycerol-3-phosphate dehydrogenase	96.4	32.2	45.0
MGA_818	LOCUS_08160	sequence1:517317..517661(+)	internal_stop_codon	517287..517289(+),517311..517313(+)		WP_000251253.1	DUF402 domain-containing protein	90.4	57.2	31.1
MGA_826	LOCUS_08240	sequence1:522436..523698(-)	partial			WP_011964235.1	N-6 DNA methylase	95.7	53.6	25.9
MGA_833	LOCUS_08310	sequence1:527992..528363(+)	internal_stop_codon	528361..528363(+)		WP_002467716.1	ribokinase	90.2	36.8	47.8
MGA_834	LOCUS_08320	sequence1:528397..528909(+)	internal_stop_codon	528361..528363(+)		WP_000182746.1	ribokinase	97.1	53.3	38.0
MGA_839	LOCUS_08370	sequence1:532088..532351(+)	internal_stop_codon	532349..532351(+),532079..532081(+)		WP_010970002.1	ABC transporter permease	77.0	20.1	50.7
MGA_840	LOCUS_08380	sequence1:533151..533519(+)	internal_stop_codon	532995..532997(+)		WP_011014235.1	D-ribose ABC transporter substrate-binding protein	99.2	34.4	35.5
MGA_844	LOCUS_08420	sequence1:534735..534941(-)	internal_stop_codon	534957..534959(-)		WP_001830148.1	thioredoxin	95.6	64.4	44.8
MGA_847	LOCUS_08450	sequence1:535807..536052(+)	internal_stop_codon	536050..536052(+),535762..535764(+),536119..536121(+)		WP_164919797.1	cardiolipin synthase	88.9	13.9	43.1
MGA_848	LOCUS_08460	sequence1:536200..536625(+)	internal_stop_codon	536050..536052(+),536119..536121(+)		WP_000742927.1	cardiolipin synthase	99.3	27.7	37.6
MGA_852	LOCUS_08500	sequence1:540115..540429(+)	internal_stop_codon	540622..540624(+),540628..540630(+),540427..540429(+)		WP_005904217.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	99.0	49.2	43.3
MGA_853	LOCUS_08510	sequence1:540753..541409(-)	internal_stop_codon	541509..541511(-),541587..541589(-)		WP_000721336.1	UTP--glucose-1-phosphate uridylyltransferase GalU	98.6	73.6	48.4
MGA_856	LOCUS_08540	sequence1:542484..542981(-)	internal_stop_codon	542484..542486(-),542196..542198(-),542421..542423(-),542283..542285(-)		WP_011183485.1	tyrosine--tRNA ligase	97.6	39.7	50.0
MGA_857	LOCUS_08550	sequence1:543358..543978(+)	partial			WP_011183488.1	DegV family protein	54.4	41.3	37.9
MGA_865	LOCUS_08630	sequence1:546510..546968(-)	internal_stop_codon	546510..546512(-)		WP_012546120.1	tRNA pseudouridine(55) synthase TruB	99.3	49.7	39.1
MGA_866	LOCUS_08640	sequence1:546974..547330(-)	internal_stop_codon	547448..547450(-)		WP_003416006.1	hypoxanthine phosphoribosyltransferase	92.4	61.7	57.8
MGA_870	LOCUS_08680	sequence1:549230..549448(-)	internal_stop_codon	549455..549457(-)		WP_100609812.1	phosphoenolpyruvate--protein phosphotransferase	100.0	12.5	62.5
MGA_871	LOCUS_08690	sequence1:549455..549979(-)	internal_stop_codon	549455..549457(-),550028..550030(-)		WP_003565999.1	phosphoenolpyruvate--protein phosphotransferase	100.0	30.3	67.8
MGA_872	LOCUS_08700	sequence1:550028..550948(-)	internal_stop_codon	550028..550030(-)		WP_011166470.1	phosphoenolpyruvate--protein phosphotransferase	98.7	52.7	47.0
MGA_873	LOCUS_08710	sequence1:551171..551386(-)	internal_stop_codon	551171..551173(-),551543..551545(-)		WP_003733786.1	TrkH family potassium uptake protein	70.4	11.3	50.0
MGA_876	LOCUS_08740	sequence1:553568..554788(-)	internal_stop_codon	554936..554938(-)		WP_013448045.1	excinuclease ABC subunit UvrB	98.3	59.8	56.8
MGA_877	LOCUS_08750	sequence1:554936..555544(-)	internal_stop_codon	554936..554938(-)		WP_013448045.1	excinuclease ABC subunit UvrB	99.5	30.2	58.7
MGA_878	LOCUS_08760	sequence1:555676..556116(-)	partial			WP_000162175.1	leucine-rich repeat domain-containing protein	67.1	9.0	34.7
MGA_883	LOCUS_08810	sequence1:557649..558608(-)	internal_stop_codon	557649..557651(-),558729..558731(-)		WP_001274082.1	preprotein translocase subunit SecA	97.8	37.4	58.5
MGA_884	LOCUS_08820	sequence1:558729..559061(-)	internal_stop_codon	559089..559091(-),558729..558731(-)		WP_003700639.1	preprotein translocase subunit SecA	97.3	13.6	71.0
MGA_885	LOCUS_08830	sequence1:559089..559385(-)	internal_stop_codon	559089..559091(-)		WP_000560050.1	accessory Sec system translocase SecA2	54.1	6.7	50.9
MGA_892	LOCUS_08900	sequence1:562822..563433(-)	internal_stop_codon	563455..563457(-)		WP_003723640.1	elongation factor Tu	100.0	51.4	72.9
MGA_893	LOCUS_08910	sequence1:563455..564030(-)	internal_stop_codon	563455..563457(-)		WP_011183518.1	elongation factor Tu	96.9	46.7	82.7
MGA_895	LOCUS_08930	sequence1:565054..565587(-)	internal_stop_codon	565864..565866(-),565777..565779(-),565660..565662(-),565843..565845(-)		WP_000072244.1	valine--tRNA ligase	92.7	20.9	27.7
MGA_896	LOCUS_08940	sequence1:565921..566076(-)	internal_stop_codon	566227..566229(-),566353..566355(-),566188..566190(-),566329..566331(-),566110..566112(-),566257..566259(-),565921..565923(-),565777..565779(-),565864..565866(-),566128..566130(-),565660..565662(-),565843..565845(-),566308..566310(-)		WP_004398606.1	valine--tRNA ligase	94.1	5.5	83.3
MGA_897	LOCUS_08950	sequence1:566479..566961(-)	internal_stop_codon	567163..567165(-),566353..566355(-),566227..566229(-),566329..566331(-),567199..567201(-),566257..566259(-),567025..567027(-),566479..566481(-),567205..567207(-),566308..566310(-)		WP_011166500.1	valine--tRNA ligase	100.0	18.5	47.2
MGA_898	LOCUS_08960	sequence1:567025..567156(-)	internal_stop_codon	567163..567165(-),567025..567027(-),567322..567324(-),567199..567201(-),567385..567387(-),567205..567207(-)		WP_003565119.1	valine--tRNA ligase	100.0	4.9	65.1
MGA_907	LOCUS_09050	sequence1:572188..573129(-)	internal_stop_codon	573286..573288(-),572188..572190(-),573241..573243(-)		WP_003131240.1	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE	99.0	69.2	38.4
MGA_936	LOCUS_09340	sequence1:590520..590975(+)	internal_stop_codon	590973..590975(+)		WP_011183137.1	methionine adenosyltransferase	98.7	41.4	51.3
MGA_937	LOCUS_09350	sequence1:590988..591335(+)	internal_stop_codon	591333..591335(+),590973..590975(+)		WP_011166676.1	methionine adenosyltransferase	100.0	30.0	74.1
MGA_938	LOCUS_09360	sequence1:591351..591614(+)	internal_stop_codon	591612..591614(+),591333..591335(+)		WP_011947992.1	methionine adenosyltransferase	88.5	19.7	61.0
MGA_939	LOCUS_09370	sequence1:592008..592622(-)	internal_stop_codon	592794..592796(-),592653..592655(-)		WP_011183452.1	arginine--tRNA ligase	98.0	37.3	34.6
MGA_940	LOCUS_09380	sequence1:592653..592784(-)	internal_stop_codon	592794..592796(-),593037..593039(-),592653..592655(-),593010..593012(-)		WP_003227570.1	arginine--tRNA ligase	95.3	7.2	65.9
MGA_942	LOCUS_09400	sequence1:593091..593498(-)	internal_stop_codon	593091..593093(-),593037..593039(-),593010..593012(-)		WP_001086459.1	arginine--tRNA ligase	93.3	23.0	48.4
MGA_944	LOCUS_09420	sequence1:594552..595340(-)	partial			WP_011183316.1	heat-inducible transcriptional repressor HrcA	95.4	73.7	31.1
MGA_946	LOCUS_09440	sequence1:596380..596916(-)	internal_stop_codon	596380..596382(-)		WP_011183308.1	methionyl-tRNA formyltransferase	100.0	58.8	47.3
MGA_947	LOCUS_09450	sequence1:597056..597721(-)	frameshift		597058,597003	WP_011166215.1	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA	94.1	82.0	40.8
MGA_952	LOCUS_09500	sequence1:600142..600576(+)	internal_stop_codon	600133..600135(+),599998..600000(+),600574..600576(+)		WP_001829757.1	NCS2 family permease	88.2	26.1	36.2
MGA_955	LOCUS_09530	sequence1:602170..602664(-)	internal_stop_codon	602170..602172(-),602065..602067(-)		WP_011166475.1	30S ribosomal protein S4	97.6	77.9	64.8
MGA_958	LOCUS_09560	sequence1:604555..604860(+)	internal_stop_codon	604858..604860(+)		WP_003546762.1	tRNA 4-thiouridine(8) synthase ThiI	99.0	27.4	42.0
MGA_959	LOCUS_09570	sequence1:604978..605694(+)	internal_stop_codon	604858..604860(+)		WP_011183482.1	tRNA 4-thiouridine(8) synthase ThiI	99.2	58.5	43.5
MGA_960	LOCUS_09580	sequence1:605772..606455(+)	partial			WP_003132792.1	ATP-dependent RecD-like DNA helicase	89.4	24.1	29.1
MGA_961	LOCUS_09590	sequence1:606501..606935(+)	internal_stop_codon	606933..606935(+)		WP_000451609.1	ATP-dependent RecD-like DNA helicase	56.9	10.9	42.0
MGA_962	LOCUS_09600	sequence1:606987..607640(+)	internal_stop_codon	606933..606935(+),607638..607640(+)		WP_011674456.1	ATP-dependent RecD-like DNA helicase	96.8	26.4	36.5
MGA_964	LOCUS_09620	sequence1:607922..608728(+)	internal_stop_codon	608726..608728(+),608927..608929(+)		WP_003646085.1	phospho-sugar mutase	99.6	48.0	38.0
MGA_966	LOCUS_09640	sequence1:608969..609319(+)	internal_stop_codon	608726..608728(+),608927..608929(+),609317..609319(+)		WP_156264938.1	phospho-sugar mutase	98.3	22.6	36.6
MGA_968	LOCUS_09660	sequence1:609603..609815(-)	internal_stop_codon	609990..609992(-),609603..609605(-)		WP_011166664.1	phosphate acyltransferase PlsX	100.0	21.0	44.3
MGA_969	LOCUS_09670	sequence1:609990..610451(-)	internal_stop_codon	609990..609992(-)		WP_011166664.1	phosphate acyltransferase PlsX	94.8	44.3	37.6
MGA_970	LOCUS_09680	sequence1:610464..610799(-)	internal_stop_codon	610818..610820(-)		WP_000027130.1	DAK2 domain-containing protein	100.0	20.1	37.5
MGA_971	LOCUS_09690	sequence1:610818..612086(-)	internal_stop_codon	610818..610820(-)		WP_003245033.1	DAK2 domain-containing protein	97.9	76.5	41.0
MGA_973	LOCUS_09710	sequence1:613285..613539(+)	internal_stop_codon	613537..613539(+),613585..613587(+)		WP_011860673.1	CTP--phosphocholine cytidylyltransferase	85.7	29.9	58.3
MGA_974	LOCUS_09720	sequence1:613909..614559(+)	internal_stop_codon	614557..614559(+)		WP_010867962.1	alanine--glyoxylate aminotransferase family protein	86.6	47.0	38.0
MGA_975	LOCUS_09730	sequence1:614563..615108(+)	internal_stop_codon	614557..614559(+)		WP_010870473.1	alanine--glyoxylate aminotransferase family protein	91.7	43.6	29.0
MGA_976	LOCUS_09740	sequence1:615184..615705(+)	internal_stop_codon	615730..615732(+),615754..615756(+),615703..615705(+)		WP_010874839.1	diacylglycerol beta-glycosyltransferase	69.9	35.2	30.3
MGA_982	LOCUS_09800	sequence1:617819..617998(-)	internal_stop_codon	618236..618238(-),618113..618115(-),617819..617821(-),617723..617725(-)		WP_010880244.1	glycerol kinase GlpK	72.9	8.7	62.8
MGA_983	LOCUS_09810	sequence1:618308..618475(-)	internal_stop_codon	618113..618115(-),618689..618691(-),618236..618238(-),618497..618499(-),618680..618682(-),618596..618598(-),618764..618766(-),618308..618310(-)		WP_000136799.1	glycerol kinase GlpK	100.0	11.0	74.5
MGA_984	LOCUS_09820	sequence1:619061..619192(-)	internal_stop_codon	618926..618928(-),619034..619036(-),618884..618886(-),619061..619063(-)		WP_011166455.1	glycerol kinase GlpK	95.3	8.1	65.9
MGA_985	LOCUS_09830	sequence1:619203..620006(-)	internal_stop_codon	620100..620102(-)		WP_013447578.1	type 2 glycerol-3-phosphate oxidase	100.0	69.0	53.9
MGA_986	LOCUS_09840	sequence1:620100..620369(-)	internal_stop_codon	620100..620102(-)		WP_010874408.1	type 2 glycerol-3-phosphate oxidase	76.4	17.7	50.0
MGA_990	LOCUS_09880	sequence1:622382..624244(-)	internal_stop_codon	624416..624418(-)		WP_011166380.1	alanine--tRNA ligase	96.3	69.6	35.0
MGA_991	LOCUS_09890	sequence1:624416..624538(-)	internal_stop_codon	624416..624418(-),624602..624604(-),624542..624544(-)		WP_010874775.1	alanine--tRNA ligase	100.0	4.7	64.3
MGA_992	LOCUS_09900	sequence1:624602..624874(-)	internal_stop_codon	624977..624979(-),624542..624544(-),624602..624604(-),624416..624418(-),624896..624898(-)		WP_011166380.1	alanine--tRNA ligase	95.6	9.8	68.2
MGA_996	LOCUS_09940	sequence1:628150..629244(-)	internal_stop_codon	629308..629310(-),628150..628152(-)		WP_011166843.1	ribonuclease J	98.9	58.9	42.8
MGA_997	LOCUS_09950	sequence1:629308..629709(-)	internal_stop_codon	629308..629310(-)		WP_011166843.1	ribonuclease J	98.5	21.5	51.1
MGA_1000	LOCUS_09980	sequence1:630682..631116(-)	internal_stop_codon	630682..630684(-),631147..631149(-)		WP_010964145.1	class II fructose-1,6-bisphosphate aldolase	97.9	49.1	58.9
MGA_1003	LOCUS_10010	sequence1:632597..632821(-)	internal_stop_codon	632570..632572(-),632474..632476(-),632597..632599(-),632927..632929(-)		WP_000765995.1	decarboxylating 6-phosphogluconate dehydrogenase	97.3	24.2	69.4
MGA_1004	LOCUS_10020	sequence1:632927..633220(-)	internal_stop_codon	632927..632929(-)		WP_002370112.1	decarboxylating 6-phosphogluconate dehydrogenase	96.9	30.5	36.8
MGA_1006	LOCUS_10040	sequence1:633670..634170(-)	internal_stop_codon	633670..633672(-),634375..634377(-),633445..633447(-),634246..634248(-),634252..634254(-),634225..634227(-)		WP_020862437.1	PTS transporter subunit EIIC	98.2	31.4	49.7
MGA_1009	LOCUS_10070	sequence1:635026..635364(-)	internal_stop_codon	635503..635505(-),635425..635427(-)		WP_011071838.1	ABC-F family ATPase	99.1	20.9	45.0
MGA_1010	LOCUS_10080	sequence1:635503..635901(-)	internal_stop_codon	635503..635505(-),635425..635427(-),636061..636063(-),635920..635922(-)		WP_003702586.1	ATP-binding cassette domain-containing protein	97.7	23.7	55.0
MGA_1011	LOCUS_10090	sequence1:635920..636048(-)	internal_stop_codon	636061..636063(-),636193..636195(-),635920..635922(-),636253..636255(-)		WP_002981986.1	ATP-binding cassette domain-containing protein	100.0	7.8	61.9
MGA_1012	LOCUS_10100	sequence1:636061..636183(-)	internal_stop_codon	636061..636063(-),636193..636195(-),635920..635922(-),636253..636255(-)		WP_011986363.1	ABC-F family ATP-binding cassette domain-containing protein	97.5	7.4	74.4
MGA_1013	LOCUS_10110	sequence1:636253..636639(-)	internal_stop_codon	636253..636255(-),636061..636063(-),636193..636195(-)		WP_000958770.1	ATP-binding cassette domain-containing protein	100.0	23.7	59.4
MGA_1020	LOCUS_10180	sequence1:639437..640099(-)	internal_stop_codon	640157..640159(-)		WP_003113628.1	NAD(P)-dependent alcohol dehydrogenase	98.2	59.0	58.8
MGA_1021	LOCUS_10190	sequence1:640157..640534(-)	internal_stop_codon	640157..640159(-)		WP_003113628.1	NAD(P)-dependent alcohol dehydrogenase	95.2	34.4	50.0
MGA_1030	LOCUS_10280	sequence1:646444..647700(-)	internal_stop_codon	646294..646296(-),646444..646446(-)		WP_011166795.1	ATP F0F1 synthase subunit alpha	99.0	80.4	48.6
MGA_1040	LOCUS_10380	sequence1:653363..653593(+)	internal_stop_codon	653591..653593(+),653303..653305(+),653315..653317(+)		WP_157147433.1	excinuclease ABC subunit UvrC	81.6	10.0	41.9
MGA_1041	LOCUS_10390	sequence1:653768..654163(+)	internal_stop_codon	653591..653593(+)		WP_011182998.1	excinuclease ABC subunit UvrC	87.0	19.6	27.8
MGA_1044	LOCUS_10420	sequence1:655151..655708(+)	internal_stop_codon	655082..655084(+),655706..655708(+)		WP_010880145.1	serine--tRNA ligase	96.8	41.9	45.8
MGA_1045	LOCUS_10430	sequence1:655709..656305(+)	internal_stop_codon	655706..655708(+)		WP_002379253.1	serine--tRNA ligase	98.5	46.3	59.2
MGA_1057	LOCUS_10550	sequence1:660764..661057(+)	internal_stop_codon	661055..661057(+)		WP_011166290.1	asparagine--tRNA ligase	97.9	21.7	63.6
MGA_1058	LOCUS_10560	sequence1:661058..661573(+)	internal_stop_codon	661055..661057(+),661571..661573(+)		WP_011166290.1	asparagine--tRNA ligase	100.0	38.5	51.1
MGA_1062	LOCUS_10600	sequence1:663388..664029(+)	internal_stop_codon	664027..664029(+),664165..664167(+)		WP_003644128.1	DNA helicase PcrA	97.2	27.2	41.5
MGA_1063	LOCUS_10610	sequence1:664528..664833(+)	internal_stop_codon	664984..664986(+),664831..664833(+),665056..665058(+),664393..664395(+)		WP_002457083.1	DNA helicase PcrA	65.3	9.2	47.8
MGA_1064	LOCUS_10620	sequence1:665086..665589(+)	partial			WP_000383403.1	DNA helicase II	82.0	18.3	37.4
MGA_1070	LOCUS_10680	sequence1:670403..671047(-)	internal_stop_codon	671072..671074(-)		WP_020862867.1	DUF2130 domain-containing protein	95.8	42.0	42.2
MGA_1071	LOCUS_10690	sequence1:671072..671881(-)	internal_stop_codon	671072..671074(-)		WP_020862867.1	DUF2130 domain-containing protein	97.8	52.9	26.2
MGA_1072	LOCUS_10700	sequence1:671958..672191(-)	internal_stop_codon	672240..672242(-),672438..672440(-),672261..672263(-),672195..672197(-)		WP_011166365.1	M17 family metallopeptidase	93.5	16.2	43.8
MGA_1073	LOCUS_10710	sequence1:672261..672431(-)	internal_stop_codon	672240..672242(-),672438..672440(-),672261..672263(-),672195..672197(-)		WP_011015910.1	leucyl aminopeptidase	98.2	11.5	69.1
MGA_1074	LOCUS_10720	sequence1:672438..672752(-)	internal_stop_codon	672840..672842(-),672240..672242(-),672261..672263(-),672438..672440(-),672195..672197(-)		WP_010874929.1	leucyl aminopeptidase	100.0	23.4	58.7
MGA_1076	LOCUS_10740	sequence1:673507..674154(-)	partial			WP_010874575.1	ATP-binding cassette domain-containing protein	84.2	21.5	53.5
MGA_1079	LOCUS_10770	sequence1:675442..675843(-)	partial			WP_010874575.1	ATP-binding cassette domain-containing protein	98.5	15.4	41.2
MGA_1080	LOCUS_10780	sequence1:676112..676393(-)	internal_stop_codon	676112..676114(-),675923..675925(-),676619..676621(-)		WP_010874574.1	ABC transporter ATP-binding protein	100.0	22.0	65.6
MGA_1081	LOCUS_10790	sequence1:676619..677029(-)	internal_stop_codon	676619..676621(-)		WP_010874574.1	ABC transporter ATP-binding protein	59.6	18.9	49.4
MGA_1084	LOCUS_10820	sequence1:678178..678675(-)	internal_stop_codon	678748..678750(-)		WP_005647620.1	oligopeptide ABC transporter permease OppB	80.0	43.1	37.1
MGA_1089	LOCUS_10870	sequence1:682410..682628(-)	internal_stop_codon	682410..682412(-),682749..682751(-)		WP_001831993.1	glucose-6-phosphate isomerase	100.0	16.0	50.0
MGA_1090	LOCUS_10880	sequence1:682749..683264(-)	internal_stop_codon	683445..683447(-),682749..682751(-)		WP_001831993.1	glucose-6-phosphate isomerase	99.4	38.6	57.3
MGA_1093	LOCUS_10910	sequence1:684220..684465(+)	internal_stop_codon	684463..684465(+),684187..684189(+)		WP_000076460.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	100.0	12.7	66.7
MGA_1094	LOCUS_10920	sequence1:684601..684858(+)	internal_stop_codon	684463..684465(+),684856..684858(+)		WP_010963335.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	98.8	12.7	46.4
MGA_1095	LOCUS_10930	sequence1:684988..685821(+)	internal_stop_codon	684856..684858(+),685819..685821(+)		WP_003226808.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	100.0	43.7	60.6
MGA_1096	LOCUS_10940	sequence1:685831..685983(+)	internal_stop_codon	685819..685821(+)		WP_010933913.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	98.0	7.6	65.3
MGA_1097	LOCUS_10950	sequence1:686049..686216(+)	internal_stop_codon	686214..686216(+)		WP_004598633.1	UMP kinase	98.2	21.9	53.7
MGA_1098	LOCUS_10960	sequence1:686274..686765(+)	internal_stop_codon	686214..686216(+)		WP_013383887.1	UMP kinase	99.4	66.1	47.5
MGA_1102	LOCUS_11000	sequence1:688096..688269(+)	internal_stop_codon	687967..687969(+),687988..687990(+)		WP_011166549.1	phosphatidate cytidylyltransferase	96.5	14.7	54.5
