{
    "type": "genome",
    "identifier": "GCF_024832785.1",
    "organism": "Fontisphaera persica",
    "title": "Fontisphaera persica",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "Research Center of Biotechnology RAS",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_024832785.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN30431592",
        "wgs_master": "na",
        "refseq_category": "reference genome",
        "taxid": "2974023",
        "species_taxid": "2974023",
        "organism_name": "Fontisphaera persica",
        "infraspecific_name": "strain=B-154",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Complete Genome",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2023/02/02",
        "asm_name": "ASM2483278v2",
        "asm_submitter": "Research Center of Biotechnology RAS",
        "gbrs_paired_asm": "GCA_024832785.2",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/024/832/785/GCF_024832785.1_ASM2483278v2",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "4726914",
        "genome_size_ungapped": "4726914",
        "gc_percent": "61.000000",
        "replicon_count": "1",
        "scaffold_count": "1",
        "contig_count": "1",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_024832785.1-RS_2024_05_06",
        "annotation_date": "2024-05-06",
        "total_gene_count": "3554",
        "protein_coding_gene_count": "3481",
        "non_coding_gene_count": "53",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2023-02-02",
    "dateModified": "2023-02-02",
    "datePublished": "2023-02-02",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Fontisphaera persica"
        ],
        "sample_taxid": [
            "2974023"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Russia: Baikal lake region"
        ],
        "sample_host_location_id": [],
        "data_size": "1.312 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "4726914",
        "Number of Sequences": "1",
        "Longest Sequences (bp)": "4726914",
        "N50 (bp)": "4726914",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "61.0",
        "Number of CDSs": "3528",
        "Average Protein Length": "398.0",
        "Coding Ratio (%)": "89.1",
        "Number of rRNAs": "3",
        "Number of tRNAs": "48",
        "Number of CRISPRs": "6"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Limisphaera ngatamarikiensis",
                "strain": "strain=NGM72.4",
                "accession": "GCA_011044775.1",
                "taxid": 1324935,
                "species_taxid": 1324935,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.6676,
                "matched_fragments": 90,
                "total_fragments": 1575,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Vineibacter terrae",
                "strain": "strain=CC-CFT640",
                "accession": "GCA_008039615.1",
                "taxid": 2586908,
                "species_taxid": 2586908,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.8248,
                "matched_fragments": 57,
                "total_fragments": 1575,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 100.0,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_011368065.1",
                "gtdb_species": "s__DSWX01 sp011368065",
                "ani": 78.9356,
                "matched_fragments": 635,
                "total_fragments": 1575,
                "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiae;o__Pedosphaerales;f__CAIYYI01;g__DSWX01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_011368315.1",
                "gtdb_species": "s__DSVO01 sp011368315",
                "ani": 76.8071,
                "matched_fragments": 277,
                "total_fragments": 1575,
                "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiae;o__Pedosphaerales;f__CAIYYI01;g__DSVO01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_011044775.1",
                "gtdb_species": "s__Limisphaera ngatamarikiensis",
                "ani": 76.6933,
                "matched_fragments": 89,
                "total_fragments": 1575,
                "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiae;o__Pedosphaerales;f__NGM72-4;g__Limisphaera",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016716505.1",
                "gtdb_species": "s__JADJWF01 sp016716505",
                "ani": 76.6884,
                "matched_fragments": 125,
                "total_fragments": 1575,
                "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiae;o__Pedosphaerales;f__J093;g__JADJWF01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_011058495.1",
                "gtdb_species": "s__Limisphaera sp011058495",
                "ani": 76.3572,
                "matched_fragments": 103,
                "total_fragments": 1575,
                "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiae;o__Pedosphaerales;f__NGM72-4;g__Limisphaera",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.99",
                "min_intra_species_ani": "99.98",
                "mean_intra_species_af": "0.99",
                "min_intra_species_af": "0.99",
                "num_clustered_genomes": 4,
                "status": "-"
            },
            {
                "accession": "GCA_002385705.1",
                "gtdb_species": "s__UBA3939 sp002385705",
                "ani": 76.28,
                "matched_fragments": 64,
                "total_fragments": 1575,
                "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiae;o__Pedosphaerales;f__UBA3939;g__UBA3939",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.95",
                "min_intra_species_ani": "99.95",
                "mean_intra_species_af": "0.96",
                "min_intra_species_af": "0.96",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_016871615.1",
                "gtdb_species": "s__SXXZ01 sp016871615",
                "ani": 76.2528,
                "matched_fragments": 64,
                "total_fragments": 1575,
                "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiae;o__Pedosphaerales;f__UBA9464;g__SXXZ01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_011367605.1",
                "gtdb_species": "s__DSYF01 sp011367605",
                "ani": 76.2043,
                "matched_fragments": 129,
                "total_fragments": 1575,
                "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiae;o__Pedosphaerales;f__DSYF01;g__DSYF01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_011525685.1",
                "gtdb_species": "s__WYBW01 sp011525685",
                "ani": 76.1012,
                "matched_fragments": 113,
                "total_fragments": 1575,
                "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiae;o__Pedosphaerales;f__UBA11358;g__WYBW01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_903872345.1",
                "gtdb_species": "s__UBA11358 sp903872345",
                "ani": 76.0562,
                "matched_fragments": 103,
                "total_fragments": 1575,
                "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiae;o__Pedosphaerales;f__UBA11358;g__UBA11358",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "100.00",
                "min_intra_species_ani": "100.00",
                "mean_intra_species_af": "0.99",
                "min_intra_species_af": "0.99",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_003695015.1",
                "gtdb_species": "s__J093 sp003695015",
                "ani": 76.0528,
                "matched_fragments": 92,
                "total_fragments": 1575,
                "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiae;o__Pedosphaerales;f__J093;g__J093",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_009773355.1",
                "gtdb_species": "s__SXTU01 sp009773355",
                "ani": 76.0434,
                "matched_fragments": 121,
                "total_fragments": 1575,
                "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiae;o__Pedosphaerales;f__SXTU01;g__SXTU01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.99",
                "min_intra_species_ani": "99.99",
                "mean_intra_species_af": "0.98",
                "min_intra_species_af": "0.97",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_017880715.1",
                "gtdb_species": "s__JADGRT01 sp017880715",
                "ani": 76.0225,
                "matched_fragments": 72,
                "total_fragments": 1575,
                "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiae;o__Pedosphaerales;f__JADGRT01;g__JADGRT01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_003138485.1",
                "gtdb_species": "s__Palsa-1400 sp003138485",
                "ani": 75.9574,
                "matched_fragments": 84,
                "total_fragments": 1575,
                "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiae;o__Pedosphaerales;f__Palsa-1400;g__Palsa-1400",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_903930345.1",
                "gtdb_species": "s__CAIYYI01 sp903930345",
                "ani": 75.9418,
                "matched_fragments": 164,
                "total_fragments": 1575,
                "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiae;o__Pedosphaerales;f__CAIYYI01;g__CAIYYI01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_903912925.1",
                "gtdb_species": "s__PALSA-1440 sp903912925",
                "ani": 75.9137,
                "matched_fragments": 85,
                "total_fragments": 1575,
                "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiae;o__Pedosphaerales;f__UBA8199;g__PALSA-1440",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_903845125.1",
                "gtdb_species": "s__CAIMWS01 sp903845125",
                "ani": 75.8078,
                "matched_fragments": 116,
                "total_fragments": 1575,
                "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiae;o__Pedosphaerales;f__UBA1319;g__CAIMWS01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_903944085.1",
                "gtdb_species": "s__UBA11358 sp903944085",
                "ani": 75.7753,
                "matched_fragments": 90,
                "total_fragments": 1575,
                "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiae;o__Pedosphaerales;f__UBA11358;g__UBA11358",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.64",
                "min_intra_species_ani": "99.63",
                "mean_intra_species_af": "0.93",
                "min_intra_species_af": "0.93",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_903895255.1",
                "gtdb_species": "s__UBA11358 sp903895255",
                "ani": 75.7069,
                "matched_fragments": 104,
                "total_fragments": 1575,
                "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiae;o__Pedosphaerales;f__UBA11358;g__UBA11358",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.95",
                "min_intra_species_ani": "99.95",
                "mean_intra_species_af": "0.98",
                "min_intra_species_af": "0.98",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_903863315.1",
                "gtdb_species": "s__SXTU01 sp903863315",
                "ani": 75.6255,
                "matched_fragments": 87,
                "total_fragments": 1575,
                "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiae;o__Pedosphaerales;f__SXTU01;g__SXTU01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_genome_taxon": [
        "Fontisphaera",
        "persica"
    ],
    "quality": 5,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}