{ "type": "genome", "identifier": "GCF_024919275.1", "organism": "Algoriphagus limi", "title": "Algoriphagus limi", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Chung-Ang University", "publication": [ {} ], "properties": { "assembly_accession": "GCF_024919275.1", "bioproject": "PRJNA224116", "biosample": "SAMN30451245", "wgs_master": "JANWGH000000000.1", "refseq_category": "reference genome", "taxid": "2975273", "species_taxid": "2975273", "organism_name": "Algoriphagus limi", "infraspecific_name": "strain=CAU 1643", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2022/09/04", "asm_name": "ASM2491927v1", "asm_submitter": "Chung-Ang University", "gbrs_paired_asm": "GCA_024919275.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/024/919/275/GCF_024919275.1_ASM2491927v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "3772170", "genome_size_ungapped": "3771570", "gc_percent": "40.500000", "replicon_count": "0", "scaffold_count": "7", "contig_count": "7", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_024919275.1-RS_2024_07_08", "annotation_date": "2024-07-08", "total_gene_count": "3270", "protein_coding_gene_count": "3214", "non_coding_gene_count": "47", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2022-09-04", "dateModified": "2022-09-04", "datePublished": "2022-09-04", "_annotation": { "sample_count": 1, "sample_organism": [ "Algoriphagus limi" ], "sample_taxid": [ "2975273" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "South Korea" ], 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"Algoriphagus algorifonticola", "strain": "strain=hg1", "accession": "GCA_007655305.1", "taxid": 2593007, "species_taxid": 2593007, "relation_to_type": "type", "validated": true, "ani": 77.8752, "matched_fragments": 323, "total_fragments": 1253, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Algoriphagus ornithinivorans", "strain": "strain=DSM 15282", "accession": "GCA_900115305.1", "taxid": 226506, "species_taxid": 226506, "relation_to_type": "type", "validated": true, "ani": 77.7856, "matched_fragments": 325, "total_fragments": 1253, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Algoriphagus zhangzhouensis", "strain": "strain=CGMCC 1.11027", "accession": "GCA_004366575.1", "taxid": 1073327, "species_taxid": 1073327, "relation_to_type": "type", "validated": true, "ani": 77.7601, "matched_fragments": 314, "total_fragments": 1253, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Algoriphagus zhangzhouensis", "strain": "strain=DSM 25035", "accession": "GCA_900148515.1", "taxid": 1073327, "species_taxid": 1073327, "relation_to_type": "type", "validated": true, "ani": 77.734, "matched_fragments": 316, "total_fragments": 1253, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Algoriphagus faecimaris", "strain": "strain=JCM 16561", "accession": "GCA_002150585.1", "taxid": 686796, "species_taxid": 686796, "relation_to_type": "type", "validated": true, "ani": 77.584, "matched_fragments": 298, "total_fragments": 1253, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Algoriphagus faecimaris", "strain": "strain=DSM 23095", "accession": "GCA_900101705.1", "taxid": 686796, "species_taxid": 686796, "relation_to_type": "type", "validated": true, "ani": 77.5585, "matched_fragments": 294, "total_fragments": 1253, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Algoriphagus vanfongensis", "strain": "strain=DSM 17529", "accession": 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