{ "tc_result": [ { "organism_name": "Microbacterium bovistercoris", "strain": "strain=NEAU-LLE", "accession": "GCA_003387575.1", "taxid": 2293570, "species_taxid": 2293570, "relation_to_type": "type", "validated": true, "ani": 82.6854, "matched_fragments": 577, "total_fragments": 848, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium commune", "strain": "strain=Re1", "accession": "GCA_014836945.1", "taxid": 2762219, "species_taxid": 2762219, "relation_to_type": "type", "validated": true, "ani": 82.5146, "matched_fragments": 581, "total_fragments": 848, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium esteraromaticum", "strain": "strain=DSM 8609", "accession": "GCA_016907315.1", "taxid": 57043, "species_taxid": 57043, "relation_to_type": "suspected-type", "validated": true, "ani": 82.2107, "matched_fragments": 593, "total_fragments": 848, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium paraoxydans", "strain": "strain=NBRC 103076", "accession": "GCA_001552495.1", "taxid": 199592, "species_taxid": 199592, "relation_to_type": "suspected-type", "validated": true, "ani": 82.0696, "matched_fragments": 503, "total_fragments": 848, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium paraoxydans", "strain": "strain=DSM 15019", "accession": "GCA_900105335.1", "taxid": 199592, "species_taxid": 199592, "relation_to_type": "suspected-type", "validated": true, "ani": 82.0589, "matched_fragments": 563, "total_fragments": 848, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium azadirachtae", "strain": "strain=DSM 23848", "accession": "GCA_000956545.1", "taxid": 582680, "species_taxid": 582680, "relation_to_type": "type", "validated": true, "ani": 81.8698, "matched_fragments": 534, "total_fragments": 848, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium resistens", "strain": "strain=NBRC 103078", "accession": "GCA_001552355.1", "taxid": 156977, "species_taxid": 156977, "relation_to_type": "type", "validated": true, "ani": 81.7961, "matched_fragments": 530, "total_fragments": 848, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium pseudoresistens", "strain": "strain=DSM 22185", "accession": "GCA_013409745.1", "taxid": 640634, "species_taxid": 640634, "relation_to_type": "type", "validated": true, "ani": 81.6195, "matched_fragments": 502, "total_fragments": 848, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium hydrocarbonoxydans", "strain": "strain=DSM 16089", "accession": "GCA_900105205.1", "taxid": 273678, "species_taxid": 273678, "relation_to_type": "suspected-type", "validated": true, "ani": 81.4601, "matched_fragments": 567, "total_fragments": 848, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium hydrocarbonoxydans", "strain": "strain=NBRC 103074", "accession": "GCA_001552455.1", "taxid": 273678, "species_taxid": 273678, "relation_to_type": "suspected-type", "validated": true, "ani": 81.4092, "matched_fragments": 556, "total_fragments": 848, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium ginsengiterrae", "strain": "strain=DSM 24823", "accession": "GCA_014205075.1", "taxid": 546115, "species_taxid": 546115, "relation_to_type": "type", "validated": true, "ani": 81.0276, "matched_fragments": 528, "total_fragments": 848, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium ginsengiterrae", "strain": "strain=JCM 15516", "accession": "GCA_015278215.1", "taxid": 546115, "species_taxid": 546115, "relation_to_type": "type", "validated": true, "ani": 80.9009, "matched_fragments": 531, "total_fragments": 848, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium cremeum", "strain": "strain=NY27", "accession": "GCA_015277855.1", "taxid": 2782169, "species_taxid": 2782169, "relation_to_type": "type", "validated": true, "ani": 80.635, "matched_fragments": 487, "total_fragments": 848, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium oryzae", "strain": "strain=MB-10", "accession": "GCA_009735645.1", "taxid": 743009, "species_taxid": 743009, "relation_to_type": "type", "validated": true, "ani": 80.5147, "matched_fragments": 425, "total_fragments": 848, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium luticocti", "strain": "strain=DSM 19459", "accession": "GCA_000422405.1", "taxid": 451764, "species_taxid": 451764, "relation_to_type": "type", "validated": true, "ani": 80.4842, "matched_fragments": 459, "total_fragments": 848, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium atlanticum", "strain": "strain=WY121", "accession": "GCA_015277815.1", "taxid": 2782168, "species_taxid": 2782168, "relation_to_type": "type", "validated": true, "ani": 80.4494, "matched_fragments": 472, "total_fragments": 848, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium marinum", "strain": "strain=DSM 24947", "accession": "GCA_014204835.1", "taxid": 421115, "species_taxid": 421115, "relation_to_type": "type", "validated": true, "ani": 80.1412, "matched_fragments": 404, "total_fragments": 848, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Curtobacterium herbarum", "strain": "strain=DSM 14013", "accession": "GCA_016907335.1", "taxid": 150122, "species_taxid": 150122, "relation_to_type": "suspected-type", "validated": true, "ani": 78.6512, "matched_fragments": 290, "total_fragments": 848, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Curtobacterium herbarum", "strain": "strain=LMG19917T", "accession": "GCA_025000405.1", "taxid": 150122, "species_taxid": 150122, "relation_to_type": "suspected-type", "validated": true, "ani": 78.462, "matched_fragments": 285, "total_fragments": 848, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 95.83, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_015040615.1", "gtdb_species": "s__Microbacterium sp015040615", "ani": 83.5608, "matched_fragments": 618, "total_fragments": 848, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_002705755.3", "gtdb_species": "s__Microbacterium esteraromaticum_A", "ani": 82.8469, "matched_fragments": 572, "total_fragments": 848, "gtdb_taxonomy": 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"d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_900105335.1", "gtdb_species": "s__Microbacterium paraoxydans", "ani": 82.0501, "matched_fragments": 564, "total_fragments": 848, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.3631, "mean_intra_species_ani": "99.12", "min_intra_species_ani": "98.76", "mean_intra_species_af": "0.96", "min_intra_species_af": "0.92", "num_clustered_genomes": 5, "status": "-" }, { "accession": "GCF_902506375.1", "gtdb_species": "s__Microbacterium sp902506375", "ani": 82.0329, "matched_fragments": 565, "total_fragments": 848, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_013408055.1", "gtdb_species": "s__Microbacterium esteraromaticum_C", "ani": 81.9117, "matched_fragments": 547, "total_fragments": 848, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.47", "min_intra_species_ani": "97.77", "mean_intra_species_af": "0.93", "min_intra_species_af": "0.90", "num_clustered_genomes": 5, "status": "-" }, { "accession": "GCF_001866135.1", "gtdb_species": "s__Microbacterium sp001866135", "ani": 81.8412, "matched_fragments": 560, "total_fragments": 848, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.261, "mean_intra_species_ani": "97.41", "min_intra_species_ani": "95.65", "mean_intra_species_af": "0.93", "min_intra_species_af": "0.91", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_000956545.1", "gtdb_species": "s__Microbacterium azadirachtae", "ani": 81.8274, "matched_fragments": 537, "total_fragments": 848, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.29", "min_intra_species_ani": "96.06", "mean_intra_species_af": "0.91", "min_intra_species_af": "0.89", "num_clustered_genomes": 5, "status": "-" }, { "accession": "GCF_001552355.1", "gtdb_species": "s__Microbacterium resistens", "ani": 81.8105, "matched_fragments": 530, "total_fragments": 848, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001513675.1", "gtdb_species": "s__Microbacterium sp001513675", "ani": 81.6928, "matched_fragments": 559, "total_fragments": 848, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_017306305.1", "gtdb_species": "s__Microbacterium sp017306305", "ani": 81.6919, "matched_fragments": 566, "total_fragments": 848, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.93", "min_intra_species_ani": "98.76", "mean_intra_species_af": "0.92", "min_intra_species_af": "0.91", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_013409745.1", "gtdb_species": "s__Microbacterium pseudoresistens", "ani": 81.6323, "matched_fragments": 499, "total_fragments": 848, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_018268515.1", "gtdb_species": "s__Microbacterium sp018268515", "ani": 81.6249, "matched_fragments": 525, "total_fragments": 848, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_017744855.1", "gtdb_species": "s__Microbacterium sp017744855", "ani": 81.4889, "matched_fragments": 459, "total_fragments": 848, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000956505.1", "gtdb_species": "s__Microbacterium azadirachtae_A", "ani": 81.3564, "matched_fragments": 553, "total_fragments": 848, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "96.57", "min_intra_species_ani": "96.57", "mean_intra_species_af": "0.89", "min_intra_species_af": "0.89", "num_clustered_genomes": 2, "status": "-" } ] }