# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_7	LOCUS_00070	sequence1:8600..8962(-)	partial			WP_011020315.1	IS200/IS605-like element ISMac7 family transposase	73.3	74.0	37.1
MGA_43	LOCUS_00430	sequence1:42302..43714(-)	partial			WP_011948132.1	polysaccharide deacetylase family protein	41.7	71.5	44.3
MGA_59	LOCUS_00590	sequence1:59083..59310(+)	partial			WP_002438434.1	MurR/RpiR family transcriptional regulator	94.7	28.1	42.3
MGA_60	LOCUS_00600	sequence1:59407..60480(+)	partial			WP_012775606.1	IS1595-like element ISSsu9 family transposase	70.0	71.8	33.1
MGA_61	LOCUS_00610	sequence1:60637..61068(+)	partial			WP_010963852.1	MurR/RpiR family transcriptional regulator	100.0	55.3	32.4
MGA_67	LOCUS_00670	sequence1:66812..67177(+)	partial			WP_003721853.1	helix-turn-helix transcriptional regulator	62.8	45.0	56.6
MGA_69	LOCUS_00690	sequence1:69164..71257(+)	partial			WP_010989556.1	ABC transporter ATP-binding protein/permease	48.1	55.0	27.0
MGA_73	LOCUS_00730	sequence1:74708..75217(+)	partial			WP_010965083.1	NUDIX domain-containing protein	78.7	46.9	47.9
MGA_96	LOCUS_00960	sequence1:94927..95961(+)	frameshift		94906	WP_094396572.1	IS3 family transposase	83.7	64.9	49.8
MGA_105	LOCUS_01050	sequence1:104815..105726(+)	partial			WP_011860957.1	N-acetylmuramoyl-L-alanine amidase	67.7	69.0	41.0
MGA_123	LOCUS_01230	sequence1:126187..126993(+)	partial			WP_000527072.1	M4 family metallopeptidase	42.2	13.0	40.5
MGA_124	LOCUS_01240	sequence1:126978..127529(+)	partial			WP_002362481.1	rhomboid family intramembrane serine protease	94.0	71.6	31.6
MGA_140	LOCUS_01360	sequence1:145560..146843(+)	partial			WP_013385747.1	MYG1 family protein	36.5	56.2	29.5
MGA_153	LOCUS_01450	sequence1:159542..160237(-)	partial			WP_011987059.1	polysaccharide deacetylase family protein	83.5	66.7	43.2
MGA_181	LOCUS_01730	sequence1:184558..185775(+)	frameshift,internal_stop_codon	185773..185775(+)	185781	WP_003723741.1	bifunctional tRNA lysidine(34) synthetase TilS/hypoxanthine phosphoribosyltransferase HprT	95.3	65.9	29.7
MGA_187	LOCUS_01790	sequence1:191291..191746(-)	partial			WP_011861372.1	4Fe-4S binding protein	84.1	41.2	30.0
MGA_207	LOCUS_01990	sequence1:208285..208419(+)	partial			WP_001288202.1	lysine--tRNA ligase	97.7	9.1	66.7
MGA_209	LOCUS_02010	sequence1:210425..211561(-)	partial			WP_011476292.1	helix-turn-helix transcriptional regulator	37.3	67.5	31.9
MGA_224	LOCUS_02160	sequence1:226226..229447(+)	partial			WP_027480135.1	right-handed parallel beta-helix repeat-containing protein	20.8	21.8	29.5
MGA_258	LOCUS_02500	sequence1:267316..268047(-)	partial			WP_048064836.1	SWIM zinc finger family protein	76.5	60.3	35.4
MGA_259	LOCUS_02510	sequence1:268051..270621(-)	partial			WP_011020247.1	DEAD/DEAH box helicase	80.3	67.7	40.2
MGA_267	LOCUS_02590	sequence1:281421..282518(-)	partial			WP_010964224.1	alanyl-tRNA editing protein	73.7	71.3	35.6
MGA_271	LOCUS_02630	sequence1:285415..286488(+)	partial			WP_012775606.1	IS1595-like element ISSsu9 family transposase	70.0	71.8	33.1
MGA_278	LOCUS_02700	sequence1:295081..296394(-)	partial			WP_094396572.1	IS3 family transposase	62.2	59.9	33.7
MGA_296	LOCUS_02870	sequence1:313408..313824(+)	partial			WP_011202637.1	carboxymuconolactone decarboxylase family protein	93.5	48.5	57.6
MGA_297	LOCUS_02880	sequence1:314524..315171(+)	partial			WP_014565877.1	flavodoxin	82.3	41.1	27.1
MGA_298	LOCUS_02890	sequence1:315209..316078(+)	partial			WP_000977671.1	diacylglycerol kinase	74.0	72.1	31.7
MGA_309	LOCUS_03000	sequence1:324621..325166(+)	partial			WP_009910868.1	dihydroxyacetone kinase transcriptional activator DhaS	74.6	77.3	30.0
MGA_323	LOCUS_03140	sequence1:335106..335411(+)	partial			WP_003721732.1	ROK family protein	88.1	29.7	39.3
MGA_337	LOCUS_03280	sequence1:345994..346494(+)	partial			WP_003733949.1	PTS sugar transporter subunit IIC	91.6	34.2	47.4
MGA_364	LOCUS_03550	sequence1:378147..379529(+)	partial			WP_003706239.1	multifunctional CCA addition/repair protein	57.0	61.7	39.5
MGA_393	LOCUS_03840	sequence1:407660..408328(-)	partial			WP_004082910.1	biotin--[acetyl-CoA-carboxylase] ligase	68.0	69.3	36.4
MGA_412	LOCUS_04030	sequence1:424345..425418(-)	partial			WP_012775606.1	IS1595-like element ISSsu9 family transposase	70.0	71.8	33.1
MGA_416	LOCUS_04070	sequence1:427603..428151(-)	partial			WP_005802804.1	chromate transporter	72.5	73.9	41.4
MGA_420	LOCUS_04110	sequence1:430225..430524(+)	frameshift,internal_stop_codon	430522..430524(+)	430770	WP_011476549.1	RNA-guided endonuclease TnpB family protein	84.8	21.0	46.5
MGA_422	LOCUS_04130	sequence1:430887..431363(+)	frameshift		430770	WP_011476549.1	RNA-guided endonuclease TnpB family protein	94.3	36.8	48.3
MGA_423	LOCUS_04140	sequence1:431515..432165(+)	partial			WP_003435856.1	PHP domain-containing protein	97.2	70.1	29.6
MGA_430	LOCUS_04210	sequence1:438440..439576(-)	partial			WP_055164393.1	IS30 family transposase	63.0	73.9	35.5
MGA_431	LOCUS_04220	sequence1:439956..443381(+)	partial			WP_013390176.1	family 20 glycosylhydrolase	36.7	36.6	25.1
MGA_432	LOCUS_04230	sequence1:443436..447011(+)	partial			WP_013390176.1	family 20 glycosylhydrolase	45.0	43.9	24.4
MGA_433	LOCUS_04240	sequence1:447067..450657(+)	partial			WP_013390176.1	family 20 glycosylhydrolase	45.7	44.1	25.2
MGA_440	LOCUS_04310	sequence1:456352..457308(+)	partial			WP_003156899.1	S-layer homology domain-containing protein	72.0	44.7	36.5
MGA_446	LOCUS_04370	sequence1:460709..461473(-)	partial			WP_000141432.1	glycoside hydrolase family 32 protein	83.9	42.7	38.1
MGA_449	LOCUS_04400	sequence1:464028..464378(-)	partial			WP_011100912.1	sucrose-6-phosphate hydrolase	65.5	15.4	41.6
MGA_450	LOCUS_04410	sequence1:464389..464658(-)	partial			WP_000367320.1	sucrose-specific PTS transporter subunit IIBC	79.8	15.5	52.1
MGA_480	LOCUS_04710	sequence1:500430..501257(+)	partial			WP_013913612.1	helix-turn-helix domain-containing protein	96.0	38.7	28.6
MGA_481	LOCUS_04720	sequence1:501384..504101(+)	partial			WP_002266940.1	prolyl oligopeptidase family serine peptidase	43.2	82.5	33.3
MGA_489	LOCUS_04760	sequence1:513439..513615(+)	partial			WP_002387645.1	family 1 glycosylhydrolase	94.8	11.3	74.5
MGA_491	LOCUS_04780	sequence1:515284..515970(+)	partial			WP_011461119.1	DUF134 domain-containing protein	39.9	74.4	43.0
MGA_492	LOCUS_04790	sequence1:516151..517374(+)	partial			WP_000458116.1	choline-binding protein CbpA	36.1	19.4	31.3
MGA_509	LOCUS_04960	sequence1:535522..537753(+)	internal_stop_codon	537751..537753(+)		WP_211477941.1	SpaA isopeptide-forming pilin-related protein	67.3	37.6	29.5
MGA_510	LOCUS_04970	sequence1:537931..538311(+)	internal_stop_codon	537751..537753(+)		WP_141114612.1	SpaA isopeptide-forming pilin-related protein	46.0	1.8	46.6
MGA_518	LOCUS_05050	sequence1:545386..545592(+)	partial			WP_011182964.1	helix-turn-helix transcriptional regulator	80.9	70.5	50.9
MGA_534	LOCUS_05210	sequence1:561820..563145(-)	partial			WP_004454160.1	HAMP domain-containing sensor histidine kinase	73.2	74.1	30.2
MGA_539	LOCUS_05260	sequence1:567912..568097(+)	partial			WP_011024226.1	PspC domain-containing protein	98.4	32.8	61.7
MGA_548	LOCUS_05350	sequence1:574676..575812(-)	partial			WP_055164393.1	IS30 family transposase	63.0	73.9	35.5
MGA_567	LOCUS_05540	sequence1:592246..593391(+)	partial			WP_011122924.1	restriction endonuclease subunit S	38.6	27.6	36.8
MGA_571	LOCUS_05580	sequence1:596832..597905(-)	partial			WP_012775606.1	IS1595-like element ISSsu9 family transposase	70.0	71.8	33.1
MGA_582	LOCUS_05690	sequence1:610651..611268(+)	partial			WP_010964147.1	VanZ family protein	68.3	46.4	32.2
MGA_597	LOCUS_05840	sequence1:624055..624819(+)	partial			WP_011249477.1	alpha/beta hydrolase-fold protein	96.1	52.1	33.6
MGA_630	LOCUS_06170	sequence1:660890..662203(-)	partial			WP_094396572.1	IS3 family transposase	62.2	59.9	33.7
MGA_632	LOCUS_06190	sequence1:662636..663376(-)	partial			WP_094396572.1	IS3 family transposase	71.5	41.9	44.6
MGA_687	LOCUS_06720	sequence1:704491..706368(-)	internal_stop_codon	706384..706386(-),706381..706383(-)		WP_000796600.1	heavy metal translocating P-type ATPase	96.5	76.0	58.7
MGA_688	LOCUS_06730	sequence1:706384..706602(-)	internal_stop_codon	706384..706386(-),706381..706383(-)		WP_010965539.1	heavy metal translocating P-type ATPase	97.2	10.2	39.4
MGA_694	LOCUS_06790	sequence1:711728..711904(+)	internal_stop_codon	711902..711904(+)		WP_002896670.1	PTS transporter subunit EIIC	89.7	11.5	67.3
MGA_695	LOCUS_06800	sequence1:712010..712456(+)	internal_stop_codon	712454..712456(+),711902..711904(+)		WP_002896670.1	PTS transporter subunit EIIC	99.3	32.5	57.1
MGA_696	LOCUS_06810	sequence1:712574..713113(+)	internal_stop_codon	712454..712456(+)		WP_002896670.1	PTS transporter subunit EIIC	91.6	36.2	68.3
MGA_698	LOCUS_06830	sequence1:715196..716074(-)	partial			WP_000163006.1	IS30-like element ISSmi1 family transposase	95.2	68.8	33.7
MGA_704	LOCUS_06890	sequence1:722925..723212(+)	partial			WP_002263680.1	type II toxin-antitoxin system RelB/DinJ family antitoxin	50.5	59.3	58.3
MGA_707	LOCUS_06920	sequence1:724289..725323(-)	frameshift		725343	WP_094396572.1	IS3 family transposase	83.7	64.9	49.8
MGA_715	LOCUS_07000	sequence1:734101..735237(+)	partial			WP_055164393.1	IS30 family transposase	63.0	73.9	36.4
MGA_717	LOCUS_07020	sequence1:736830..737966(+)	partial			WP_055164393.1	IS30 family transposase	63.0	73.9	35.5
MGA_726	LOCUS_07110	sequence1:747295..748176(+)	partial			WP_010906140.1	Fe-S cluster assembly protein SufD	55.6	39.0	30.1
MGA_731	LOCUS_07160	sequence1:751828..753288(+)	partial			WP_011250814.1	tRNA (guanine(6)-N2)-methyltransferase	33.7	43.8	27.5
MGA_738	LOCUS_07220	sequence1:758103..758330(+)	partial			WP_010886606.1	NifU family protein	97.3	65.8	52.1
MGA_742	LOCUS_07260	sequence1:761350..763053(+)	partial			WP_011254626.1	ABC transporter ATP-binding protein/permease	54.9	42.9	30.5
MGA_743	LOCUS_07270	sequence1:763055..764836(+)	partial			WP_011254626.1	ABC transporter ATP-binding protein/permease	57.2	48.0	28.1
MGA_747	LOCUS_07310	sequence1:768251..769354(+)	partial			WP_010989931.1	FAD-dependent oxidoreductase	98.4	56.2	42.9
MGA_753	LOCUS_07370	sequence1:773650..774411(+)	partial			WP_010965345.1	3D domain-containing protein	62.5	27.6	34.5
MGA_762	LOCUS_07460	sequence1:779561..780151(-)	partial			WP_010979846.1	IS110-like element ISSto6 family transposase	63.8	34.2	39.2
MGA_767	LOCUS_07510	sequence1:783319..788529(+)	partial			WP_013390216.1	discoidin domain-containing protein	60.4	68.5	32.4
MGA_775	LOCUS_07590	sequence1:795067..795579(-)	frameshift,internal_stop_codon	795583..795585(-)	795613	WP_011475589.1	O-acetyl-ADP-ribose deacetylase	96.5	35.7	60.4
MGA_776	LOCUS_07600	sequence1:795590..796405(-)	partial			WP_000749215.1	tetratricopeptide repeat protein	57.9	30.4	27.4
MGA_790	LOCUS_07740	sequence1:812246..813217(+)	partial			WP_009898459.1	Na/Pi cotransporter family protein	92.9	55.5	45.4
MGA_809	LOCUS_07930	sequence1:831552..832625(-)	partial			WP_012775606.1	IS1595-like element ISSsu9 family transposase	70.0	71.8	33.1
MGA_817	LOCUS_08010	sequence1:837130..837636(+)	partial			WP_005814119.1	GNAT family N-acetyltransferase	63.7	63.4	33.3
MGA_819	LOCUS_08030	sequence1:838311..839345(+)	frameshift		838290	WP_094396572.1	IS3 family transposase	83.7	64.9	49.8
MGA_823	LOCUS_08070	sequence1:842902..845673(+)	partial			WP_011084794.1	pectinesterase family protein	21.0	59.0	27.8
MGA_838	LOCUS_08220	sequence1:858560..858712(+)	frameshift		858637	WP_009897221.1	RNA-guided endonuclease TnpB family protein	96.0	11.3	50.0
MGA_839	LOCUS_08230	sequence1:858687..858929(+)	partial			WP_000197065.1	RNA-guided endonuclease TnpB family protein	96.2	16.4	48.1
MGA_847	LOCUS_08310	sequence1:863777..864061(+)	partial			WP_011027855.1	L,D-transpeptidase family protein	62.8	25.2	45.0
MGA_848	LOCUS_08320	sequence1:864396..865799(+)	partial			WP_011074171.1	L-methionine/branched-chain amino acid transporter	74.3	77.0	22.0
MGA_856	LOCUS_08400	sequence1:873421..874074(+)	partial			WP_002368695.1	D-Ala-D-Ala carboxypeptidase VanY-B	82.0	66.4	50.0
MGA_857	LOCUS_08410	sequence1:874123..875160(+)	partial			WP_011837587.1	8-oxo-dGTP diphosphatase	36.2	83.9	50.8
MGA_861	LOCUS_08450	sequence1:880055..880783(+)	partial			WP_004295276.1	arginase family protein	72.7	68.4	40.2
MGA_876	LOCUS_08600	sequence1:892719..893123(+)	partial			WP_003245017.1	YitT family protein	84.3	40.7	35.1
MGA_878	LOCUS_08620	sequence1:894653..895681(+)	internal_stop_codon	894644..894646(+)		WP_000963214.1	Eco57I restriction-modification methylase domain-containing protein	99.7	54.4	44.9
MGA_888	LOCUS_08720	sequence1:907964..908452(+)	partial			WP_010964635.1	YitT family protein	96.3	54.7	29.3
MGA_890	LOCUS_08740	sequence1:910166..911266(+)	partial			WP_012775606.1	IS1595-like element ISSsu9 family transposase	70.8	78.3	26.5
MGA_893	LOCUS_08770	sequence1:913289..914053(-)	partial			WP_008762705.1	AraC family transcriptional regulator	46.1	41.1	31.7
MGA_894	LOCUS_08780	sequence1:914345..915388(+)	partial			WP_002287480.1	hypothetical protein	31.4	42.2	39.5
MGA_900	LOCUS_08840	sequence1:919659..920348(-)	partial			WP_004398482.1	anti-sigma-V factor RsiV	64.6	53.0	39.5
MGA_905	LOCUS_08890	sequence1:926657..927133(+)	partial			WP_002211251.1	flavodoxin	62.0	45.2	46.0
MGA_919	LOCUS_09030	sequence1:940005..940607(+)	partial			WP_010965264.1	alpha/beta hydrolase	76.5	71.5	28.0
MGA_923	LOCUS_09070	sequence1:941879..942832(-)	frameshift		942784,942931	WP_094396572.1	IS3 family transposase	77.3	54.7	53.3
MGA_933	LOCUS_09170	sequence1:951934..952602(+)	partial			WP_003130744.1	cell division protein FtsQ/DivIB	82.9	47.4	26.0
MGA_934	LOCUS_09180	sequence1:952712..953977(+)	partial			WP_000391031.1	cell division protein FtsA	82.7	74.5	28.3
MGA_936	LOCUS_09200	sequence1:955279..955869(-)	partial			WP_010979846.1	IS110-like element ISSto6 family transposase	63.8	34.2	39.2
MGA_962	LOCUS_09430	sequence1:982567..984006(+)	partial			WP_003434503.1	C40 family peptidase	33.0	45.6	37.7
MGA_997	LOCUS_09780	sequence1:1025111..1026241(-)	partial			WP_012775606.1	IS1595-like element ISSsu9 family transposase	72.6	82.4	25.2
MGA_1021	LOCUS_10020	sequence1:1050312..1050764(+)	partial			WP_000031832.1	recombinase family protein	46.0	12.5	47.1
MGA_1023	LOCUS_10040	sequence1:1052537..1054126(+)	partial			WP_012582720.1	response regulator	23.6	25.3	43.2
MGA_1024	LOCUS_10050	sequence1:1054116..1055834(+)	partial			WP_000831067.1	sensor histidine kinase	71.0	71.0	32.8
MGA_1035	LOCUS_10160	sequence1:1062106..1063323(+)	partial			WP_011262986.1	YdcF family protein	29.1	31.0	41.5
MGA_1062	LOCUS_10430	sequence1:1089188..1089826(+)	partial			WP_160268268.1	exonuclease domain-containing protein	90.6	39.2	35.4
MGA_1067	LOCUS_10480	sequence1:1093782..1094222(-)	internal_stop_codon	1093782..1093784(-)		WP_002279620.1	TetR/AcrR family transcriptional regulator	100.0	79.8	42.0
MGA_1075	LOCUS_10560	sequence1:1100435..1101664(-)	partial			WP_011860860.1	sensor histidine kinase	56.2	51.3	27.4
MGA_1078	LOCUS_10590	sequence1:1103833..1104438(+)	partial			WP_010989764.1	ABC transporter ATP-binding protein	88.1	61.4	34.0
MGA_1081	LOCUS_10620	sequence1:1105694..1106704(+)	partial			WP_013913612.1	helix-turn-helix domain-containing protein	87.5	45.1	25.8
MGA_1104	LOCUS_10850	sequence1:1139750..1140868(+)	partial			WP_012546519.1	radical SAM protein	74.2	82.1	24.7
MGA_1110	LOCUS_10910	sequence1:1144756..1146147(+)	partial			WP_011963430.1	tyrosine-protein kinase domain-containing protein	49.7	28.5	29.2
MGA_1122	LOCUS_11030	sequence1:1157316..1158281(+)	partial			WP_000970545.1	glycosyltransferase family A protein	74.1	71.2	28.3
MGA_1124	LOCUS_11050	sequence1:1159185..1159817(+)	partial			WP_011022159.1	CatB-related O-acetyltransferase	44.8	52.7	33.7
MGA_1128	LOCUS_11090	sequence1:1164277..1164573(+)	partial			WP_011082538.1	ATP-binding protein	56.1	13.8	49.1
MGA_1130	LOCUS_11110	sequence1:1166665..1167105(+)	internal_stop_codon	1166569..1166571(+)		WP_011082538.1	ATP-binding protein	87.0	33.6	26.4
MGA_1133	LOCUS_11140	sequence1:1170210..1171523(+)	partial			WP_094396572.1	IS3 family transposase	62.2	59.9	33.7
MGA_1139	LOCUS_11200	sequence1:1178750..1179637(-)	frameshift,internal_stop_codon	1179778..1179780(-)	1179780	WP_002288208.1	nucleotide sugar dehydrogenase	100.0	71.6	80.5
MGA_1140	LOCUS_11210	sequence1:1179769..1180191(-)	frameshift		1179777	WP_011107343.1	nucleotide sugar dehydrogenase	51.4	16.4	77.8
MGA_1142	LOCUS_11230	sequence1:1180689..1182422(+)	partial			WP_015265747.1	KAP family P-loop domain-containing protein	18.2	18.0	29.7
MGA_1154	LOCUS_11350	sequence1:1192121..1193056(+)	partial			WP_012047859.1	DNA-processing protein DprA	69.5	60.4	36.2
MGA_1160	LOCUS_11410	sequence1:1200308..1202680(+)	partial			WP_002900457.1	glycoside hydrolase family 3 N-terminal domain-containing protein	79.5	66.6	46.9
MGA_1162	LOCUS_11430	sequence1:1203381..1203806(+)	frameshift		1203351	WP_011020471.1	NAD(P)H-dependent oxidoreductase	99.3	78.8	36.2
MGA_1178	LOCUS_11590	sequence1:1217480..1218076(-)	partial			WP_003894124.1	transcriptional repressor LexA	59.6	48.6	34.5
MGA_1190	LOCUS_11710	sequence1:1228430..1229320(+)	partial			WP_011068543.1	trypsin-like peptidase domain-containing protein	90.9	37.6	35.4
MGA_1204	LOCUS_11850	sequence1:1240061..1241008(+)	partial			WP_003429292.1	nucleoid occlusion protein	74.6	76.2	27.7
MGA_1205	LOCUS_11860	sequence1:1241196..1245341(+)	partial			WP_141114612.1	SpaA isopeptide-forming pilin-related protein	73.1	28.3	25.6
MGA_1211	LOCUS_11920	sequence1:1247799..1252190(+)	frameshift		1252178	WP_010774229.1	DEAD/DEAH box helicase family protein	25.5	11.8	52.1
MGA_1212	LOCUS_11930	sequence1:1252129..1254252(+)	frameshift		1252181	WP_010774229.1	DEAD/DEAH box helicase family protein	97.2	22.1	60.0
MGA_1221	LOCUS_12020	sequence1:1262224..1263771(+)	partial			WP_011861367.1	DEAD/DEAH box helicase family protein	96.3	16.5	54.4
MGA_1225	LOCUS_12060	sequence1:1265370..1266107(+)	partial			WP_002368706.1	DUF3991 and toprim domain-containing protein	91.4	69.3	36.6
MGA_1240	LOCUS_12210	sequence1:1277426..1279189(+)	partial			WP_011861112.1	CHAP domain-containing protein	23.9	21.4	58.5
MGA_1253	LOCUS_12340	sequence1:1290480..1290944(-)	frameshift,internal_stop_codon	1291206..1291208(-)	1290524	WP_000301254.1	recombinase family protein	90.9	26.8	47.9
MGA_1254	LOCUS_12350	sequence1:1291206..1291958(-)	internal_stop_codon	1291206..1291208(-)		WP_000301254.1	recombinase family protein	99.2	47.2	73.0
MGA_1258	LOCUS_12390	sequence1:1294788..1295063(-)	internal_stop_codon	1294788..1294790(-)		WP_005791443.1	cupin domain-containing protein	100.0	77.8	60.4
MGA_1259	LOCUS_12400	sequence1:1295284..1295535(+)	internal_stop_codon	1295275..1295277(+)		WP_007056318.1	helix-turn-helix domain-containing protein	95.2	66.4	53.2
MGA_1266	LOCUS_12470	sequence1:1302075..1302272(+)	frameshift,internal_stop_codon	1302021..1302023(+)	1302260	WP_002287525.1	IS200/IS605 family element RNA-guided endonuclease TnpB	84.6	15.7	45.0
MGA_1280	LOCUS_12610	sequence1:1314346..1314900(+)	partial			WP_002673563.1	DUF5714 domain-containing protein	90.2	72.7	46.1
MGA_1284	LOCUS_12650	sequence1:1315914..1316183(+)	partial			WP_011107760.1	flavodoxin family protein	98.9	49.7	44.9
MGA_1285	LOCUS_12660	sequence1:1316288..1317361(+)	partial			WP_012775606.1	IS1595-like element ISSsu9 family transposase	70.0	71.8	33.1
MGA_1288	LOCUS_12690	sequence1:1318085..1319623(+)	partial			WP_002681336.1	2-dehydropantoate 2-reductase N-terminal domain-containing protein	56.2	54.2	52.4
MGA_1290	LOCUS_12710	sequence1:1320422..1320784(+)	partial			WP_002680020.1	acyl-CoA thioester hydrolase/BAAT C-terminal domain-containing protein	86.7	34.4	60.7
MGA_1296	LOCUS_12770	sequence1:1323275..1323958(-)	partial			WP_002262369.1	LysR family transcriptional regulator	94.3	72.5	41.1
MGA_1329	LOCUS_13100	sequence1:1340075..1341034(+)	partial			WP_010922467.1	hypothetical protein	85.3	56.5	36.6
MGA_1374	LOCUS_13550	sequence1:1378806..1379957(+)	partial			WP_004399387.1	LD-carboxypeptidase LdcB	44.1	69.6	26.7
MGA_1385	LOCUS_13660	sequence1:1388730..1389866(-)	partial			WP_055164393.1	IS30 family transposase	63.0	73.9	36.4
MGA_1407	LOCUS_13880	sequence1:1410144..1410776(+)	partial			WP_011475891.1	histidine phosphatase family protein	70.0	70.6	37.7
MGA_1448	LOCUS_14290	sequence1:1447501..1448367(-)	partial			WP_003434191.1	peptidylprolyl isomerase	48.6	79.9	55.7
MGA_1468	LOCUS_14490	sequence1:1464103..1464597(+)	frameshift		1464690,1464573,1464727	WP_000160547.1	IS30-like element ISSmi3 family transposase	92.1	33.2	33.6
MGA_1483	LOCUS_14640	sequence1:1481468..1482088(-)	frameshift,internal_stop_codon	1481416..1481418(-)	1481479	WP_011861600.1	IS200/IS605 family element RNA-guided endonuclease TnpB	98.1	51.9	32.8
MGA_1506	LOCUS_14870	sequence1:1505430..1506056(-)	partial			WP_011015821.1	DUF4261 domain-containing protein	78.4	68.0	31.0
MGA_1512	LOCUS_14930	sequence1:1509026..1510060(+)	frameshift		1509005	WP_094396572.1	IS3 family transposase	83.7	64.9	49.8
MGA_1521	LOCUS_15020	sequence1:1520253..1521866(-)	partial			WP_000595011.1	single-stranded-DNA-specific exonuclease RecJ	98.0	71.3	33.5
MGA_1538	LOCUS_15190	sequence1:1536537..1537064(-)	partial			WP_202392502.1	hypothetical protein	76.6	68.1	34.3
MGA_1543	LOCUS_15240	sequence1:1539378..1540265(-)	partial			WP_011014849.1	ABC transporter permease	74.9	76.1	32.4
MGA_1560	LOCUS_15410	sequence1:1555513..1556847(-)	partial			WP_003431793.1	patatin-like phospholipase family protein	63.3	66.0	33.9
MGA_1575	LOCUS_15560	sequence1:1570223..1570477(-)	partial			WP_002386748.1	DUF6275 family protein	72.6	62.1	68.9
MGA_1584	LOCUS_15650	sequence1:1575927..1577702(-)	partial			WP_010714197.1	tail protein	83.4	45.5	27.5
MGA_1585	LOCUS_15660	sequence1:1577998..1578618(-)	partial			WP_000224695.1	hypothetical protein	67.0	17.0	50.0
MGA_1598	LOCUS_15790	sequence1:1584087..1585595(-)	partial			WP_011109439.1	NAD+--arginine ADP-ribosyltransferase EFV	56.0	53.6	28.7
MGA_1616	LOCUS_15970	sequence1:1596829..1597347(-)	partial			WP_010922063.1	hypothetical protein	77.3	66.4	38.3
MGA_1626	LOCUS_16070	sequence1:1601983..1602621(+)	partial			WP_005421350.1	transcriptional repressor LexA	60.4	60.6	29.7
MGA_1656	LOCUS_16350	sequence1:1629923..1633042(-)	partial			WP_002263553.1	ATP-binding cassette domain-containing protein	58.6	72.1	47.2
MGA_1667	LOCUS_16460	sequence1:1640769..1641428(-)	partial			WP_009888694.1	sulfate/molybdate ABC transporter ATP-binding protein	96.8	58.7	47.6
MGA_1680	LOCUS_16590	sequence1:1654287..1655204(-)	partial			WP_002484931.1	DUF3991 domain-containing protein	98.7	38.7	26.6
MGA_1683	LOCUS_16620	sequence1:1657210..1657563(-)	partial			WP_003131088.1	NusG domain II-containing protein	79.5	71.9	34.0
MGA_1708	LOCUS_16870	sequence1:1680350..1680820(-)	partial			WP_011015059.1	ComEA family DNA-binding protein	86.5	66.8	28.0
MGA_1718	LOCUS_16970	sequence1:1689261..1690010(-)	partial			WP_004082954.1	DNA-processing protein DprA	90.8	67.7	48.5
MGA_1721	LOCUS_17000	sequence1:1691576..1692001(-)	partial			WP_002382369.1	signal peptidase I	96.5	73.4	40.6
MGA_1727	LOCUS_17060	sequence1:1694437..1696530(-)	partial			WP_011861604.1	sensor histidine kinase	72.3	66.4	36.3
MGA_1740	LOCUS_17190	sequence1:1708890..1709966(+)	frameshift		1709891	WP_070090119.1	IS110 family transposase	93.3	80.0	46.9
MGA_1747	LOCUS_17260	sequence1:1715338..1715790(-)	frameshift		1715783	WP_005808874.1	group II intron reverse transcriptase/maturase	73.3	21.7	32.7
MGA_1748	LOCUS_17270	sequence1:1715757..1716632(-)	frameshift		1715771	WP_001292559.1	group II intron reverse transcriptase/maturase	97.6	66.6	50.4
MGA_1767	LOCUS_17460	sequence1:1736530..1738335(-)	partial			WP_011861080.1	AAA family ATPase	62.7	31.7	22.9
MGA_1773	LOCUS_17520	sequence1:1743477..1744361(-)	partial			WP_012048018.1	D-alanyl-D-alanine carboxypeptidase family protein	94.9	64.6	32.4
MGA_1800	LOCUS_17750	sequence1:1772307..1772867(-)	partial			WP_003358306.1	TetR/AcrR family transcriptional regulator	61.8	60.8	40.0
MGA_1816	LOCUS_17910	sequence1:1785935..1786204(-)	partial			WP_017143218.1	acylphosphatase	88.8	63.5	42.5
MGA_1841	LOCUS_18160	sequence1:1803566..1804117(-)	frameshift		1804136	WP_003642906.1	HAD family hydrolase	94.0	84.5	30.3
MGA_1843	LOCUS_18180	sequence1:1804728..1805960(-)	partial			WP_004399387.1	LD-carboxypeptidase LdcB	53.4	80.6	41.4
MGA_1853	LOCUS_18280	sequence1:1814262..1815170(-)	partial			WP_010958086.1	DNA recombination protein RmuC	77.8	55.9	30.4
MGA_1884	LOCUS_18590	sequence1:1850190..1852295(-)	partial			WP_011101598.1	hypothetical protein	49.8	66.0	21.7
MGA_1890	LOCUS_18650	sequence1:1858060..1859373(-)	partial			WP_094396572.1	IS3 family transposase	62.2	59.9	33.7
MGA_1893	LOCUS_18680	sequence1:1861836..1862207(-)	partial			WP_002680008.1	FAD-dependent oxidoreductase	84.6	11.2	28.8
MGA_1897	LOCUS_18720	sequence1:1864919..1865449(+)	frameshift		1865416	WP_070090119.1	IS110 family transposase	94.3	39.3	53.0
MGA_1898	LOCUS_18730	sequence1:1865446..1866168(+)	frameshift		1865416	WP_070090119.1	IS110 family transposase	92.5	53.6	43.1
MGA_1904	LOCUS_18790	sequence1:1870534..1870881(-)	partial			WP_051523200.1	helix-turn-helix transcriptional regulator	61.7	40.8	39.4
MGA_1907	LOCUS_18820	sequence1:1872467..1872781(-)	partial			WP_005783910.1	rhamnulokinase family protein	93.3	25.3	38.7
MGA_1913	LOCUS_18880	sequence1:1880346..1880603(-)	partial			WP_013399666.1	type II toxin-antitoxin system HicA family toxin	92.9	67.5	67.1
MGA_1924	LOCUS_18990	sequence1:1891287..1892324(-)	partial			WP_003438532.1	competence/damage-inducible protein A	75.4	62.7	42.6
MGA_1927	LOCUS_19020	sequence1:1894719..1897424(-)	partial			WP_003433859.1	ABC transporter ATP-binding protein	68.0	82.5	55.9
MGA_1934	LOCUS_19090	sequence1:1905059..1905952(-)	partial			WP_003732568.1	primosomal protein DnaI	48.1	47.2	32.4
MGA_1956	LOCUS_19310	sequence1:1929783..1934465(-)	partial			WP_010989916.1	collagen binding domain-containing protein	53.8	48.8	20.9
MGA_1957	LOCUS_19320	sequence1:1934484..1934879(-)	partial			WP_012774995.1	signal peptidase I	96.2	63.8	46.0
MGA_1968	LOCUS_19430	sequence1:1945140..1945601(-)	partial			WP_002674090.1	pyridoxamine 5'-phosphate oxidase family protein	46.4	44.9	32.4
MGA_1974	LOCUS_19490	sequence1:1950993..1952477(+)	partial			WP_005808892.1	NlpC/P60 family protein	28.5	27.5	51.8
MGA_1985	LOCUS_19600	sequence1:1958750..1959436(-)	partial			WP_010964075.1	Tim44-like domain-containing protein	57.5	52.8	31.0
MGA_1987	LOCUS_19620	sequence1:1959778..1960539(-)	partial			WP_010989593.1	amino acid ABC transporter substrate-binding protein/permease	98.8	52.3	51.8
MGA_1989	LOCUS_19640	sequence1:1961307..1962005(-)	partial			WP_003896718.1	amino acid ABC transporter substrate-binding protein/permease	84.5	39.1	50.5
MGA_1998	LOCUS_19730	sequence1:1970429..1971502(-)	partial			WP_012775606.1	IS1595-like element ISSsu9 family transposase	70.0	71.8	33.1
MGA_2025	LOCUS_20000	sequence1:2009956..2011821(-)	partial			WP_200858944.1	DUF2075 domain-containing protein	94.7	74.3	50.2
MGA_2032	LOCUS_20070	sequence1:2020986..2023784(-)	partial			WP_013389523.1	DUF4116 domain-containing protein	41.0	44.0	24.4
MGA_2035	LOCUS_20100	sequence1:2024681..2024944(+)	partial			WP_010966434.1	tryptophan synthase subunit alpha	75.9	25.1	43.9
MGA_2041	LOCUS_20160	sequence1:2028977..2029930(+)	frameshift		2029024,2028877	WP_094396572.1	IS3 family transposase	77.3	54.7	53.3
MGA_2045	LOCUS_20200	sequence1:2031427..2031921(-)	partial			WP_002287519.1	nucleotidyl transferase AbiEii/AbiGii toxin family protein	98.8	54.2	43.2
MGA_2056	LOCUS_20310	sequence1:2040461..2041000(-)	partial			WP_207285050.1	serine O-acetyltransferase	93.9	73.3	66.7
MGA_2062	LOCUS_20370	sequence1:2045682..2046005(-)	partial			WP_010903486.1	PadR family transcriptional regulator	86.0	54.0	37.5
MGA_2089	LOCUS_20640	sequence1:2070363..2070869(+)	partial			WP_000224619.1	CYTH domain-containing protein	84.5	74.1	35.6
MGA_2093	LOCUS_20680	sequence1:2075069..2075707(-)	partial			WP_041272692.1	group II intron reverse transcriptase/maturase	90.6	40.7	53.1
MGA_2117	LOCUS_20920	sequence1:2094136..2094960(-)	partial			WP_012047704.1	MurR/RpiR family transcriptional regulator	64.2	65.3	25.0
MGA_2199	LOCUS_21740	sequence1:2165825..2167081(-)	partial			WP_000764065.1	RNA polymerase sigma factor RpoD	74.2	82.9	76.9
MGA_2215	LOCUS_21900	sequence1:2182290..2182883(-)	partial			WP_003732088.1	GW domain-containing glycosaminoglycan-binding protein	81.7	51.3	29.1
MGA_2216	LOCUS_21910	sequence1:2183171..2183923(-)	partial			WP_004399387.1	LD-carboxypeptidase LdcB	74.8	69.2	37.9
MGA_2223	LOCUS_21980	sequence1:2189832..2190200(-)	frameshift		2190273	WP_012583893.1	nickel pincer cofactor biosynthesis protein LarC	90.2	28.3	42.7
MGA_2224	LOCUS_21990	sequence1:2190271..2191068(-)	frameshift		2190273	WP_012583893.1	nickel pincer cofactor biosynthesis protein LarC	95.8	59.4	37.3
MGA_2246	LOCUS_22210	sequence1:2214236..2214880(-)	frameshift		2214869	WP_011199135.1	IS1182-like element ISBf3 family transposase	87.4	33.8	35.8
MGA_2247	LOCUS_22220	sequence1:2214849..2215217(-)	frameshift		2214853,2215351	WP_175613129.1	IS1182 family transposase	91.8	22.6	49.6
MGA_2248	LOCUS_22230	sequence1:2215244..2215861(-)	frameshift		2215222,2215366,2215174	WP_011082549.1	IS1182-like element ISSep1 family transposase	75.6	28.6	32.7
MGA_2249	LOCUS_22240	sequence1:2215951..2217468(-)	partial			WP_003722638.1	NlpC/P60 family protein	46.5	52.9	34.0
MGA_2252	LOCUS_22270	sequence1:2221372..2221971(-)	partial			WP_011143046.1	PDDEXK nuclease domain-containing protein	96.5	56.3	37.5
MGA_2254	LOCUS_22290	sequence1:2222751..2223026(-)	partial			WP_048147220.1	HAD family hydrolase	67.0	26.3	36.1
MGA_2262	LOCUS_22370	sequence1:2229080..2229514(-)	partial			WP_012869272.1	ATP synthase subunit C	66.7	72.7	32.7
MGA_2264	LOCUS_22390	sequence1:2231441..2232967(-)	partial			WP_011228564.1	V-type ATPase 116kDa subunit family protein	51.8	40.6	23.7
MGA_2279	LOCUS_22540	sequence1:2246132..2247661(+)	partial			WP_010965270.1	type IV secretory system conjugative DNA transfer family protein	68.6	57.5	27.7
MGA_2281	LOCUS_22560	sequence1:2248378..2251599(-)	partial			WP_173078242.1	FxSxx-COOH system tetratricopeptide repeat protein	37.2	41.3	35.3
MGA_2283	LOCUS_22580	sequence1:2252100..2254433(-)	frameshift		2254437	WP_011029781.1	FxSxx-COOH system tetratricopeptide repeat protein	40.3	32.4	35.1
MGA_2284	LOCUS_22590	sequence1:2254387..2254698(-)	frameshift		2254437,2254735	WP_011029781.1	FxSxx-COOH system tetratricopeptide repeat protein	84.5	9.0	36.8
MGA_2287	LOCUS_22620	sequence1:2255469..2255624(-)	partial			WP_003431416.1	family 1 glycosylhydrolase	98.0	10.2	62.0
MGA_2310	LOCUS_22820	sequence1:2271675..2272052(-)	partial			WP_002917164.1	type III-A CRISPR-associated protein Csm2	82.4	56.8	38.8
MGA_2315	LOCUS_22860	sequence1:2277453..2277845(-)	partial			WP_005811767.1	MerR family transcriptional regulator	54.6	28.7	58.3
MGA_2325	LOCUS_22960	sequence1:2286431..2287390(+)	partial			WP_011986608.1	HNH endonuclease domain-containing protein	47.3	46.2	31.6
MGA_2326	LOCUS_22970	sequence1:2287673..2288053(-)	partial			WP_015944392.1	helix-turn-helix transcriptional regulator	57.1	34.6	37.5
MGA_2328	LOCUS_22990	sequence1:2288826..2289455(-)	partial			WP_000859641.1	ATP-binding cassette domain-containing protein	96.2	68.9	38.5
MGA_2345	LOCUS_23160	sequence1:2307408..2308034(-)	partial			WP_010947931.1	Dot/Icm type IV secretion system effector LpnE	67.8	37.3	33.3
MGA_2347	LOCUS_23180	sequence1:2308769..2309842(-)	partial			WP_012775606.1	IS1595-like element ISSsu9 family transposase	70.0	71.8	33.1
MGA_2351	LOCUS_23220	sequence1:2311184..2312218(+)	frameshift		2311163	WP_094396572.1	IS3 family transposase	83.7	64.9	49.8
MGA_2358	LOCUS_23290	sequence1:2318225..2321476(-)	partial			WP_002263812.1	DUF87 domain-containing protein	62.1	58.8	40.2
MGA_2365	LOCUS_23360	sequence1:2325603..2325878(+)	partial			WP_014748777.1	IS66 family insertion sequence element accessory protein TnpB	98.9	70.9	50.0
MGA_2381	LOCUS_23520	sequence1:2337360..2338139(-)	partial			WP_005812448.1	DUF4430 domain-containing protein	30.9	29.8	39.8
MGA_2394	LOCUS_23650	sequence1:2358118..2358675(-)	frameshift		2358917	WP_070090119.1	IS110 family transposase	89.2	39.3	51.5
MGA_2395	LOCUS_23660	sequence1:2359000..2359407(-)	frameshift		2358918,2359020,2359062	WP_070090119.1	IS110 family transposase	85.2	27.4	61.2
MGA_2396	LOCUS_23670	sequence1:2359801..2360673(-)	frameshift		2360704,2360743	WP_070090119.1	IS110 family transposase	92.8	64.5	48.0
MGA_2397	LOCUS_23680	sequence1:2360684..2361091(-)	frameshift		2360704,2360746	WP_070090119.1	IS110 family transposase	85.2	27.4	61.2
MGA_2480	LOCUS_24390	sequence1:2443090..2445651(+)	partial			WP_010965561.1	helicase-exonuclease AddAB subunit AddB	57.1	48.7	25.7
MGA_2483	LOCUS_24420	sequence1:2449540..2451348(-)	partial			WP_001225342.1	HAMP domain-containing sensor histidine kinase	63.0	63.4	33.2
MGA_2489	LOCUS_24480	sequence1:2456186..2457310(-)	partial			WP_003234506.1	ABC transporter permease	63.6	54.7	27.8
MGA_2495	LOCUS_24540	sequence1:2462100..2465117(-)	partial			WP_013389449.1	glycoside hydrolase N-terminal domain-containing protein	33.3	18.2	30.7
MGA_2503	LOCUS_24620	sequence1:2470900..2471379(+)	partial			WP_002357951.1	DUF1836 domain-containing protein	71.1	60.3	42.1
MGA_2510	LOCUS_24690	sequence1:2476952..2477350(-)	internal_stop_codon	2477393..2477395(-)		WP_001831857.1	CapA family protein	81.1	29.9	43.1
MGA_2511	LOCUS_24700	sequence1:2477393..2478028(-)	internal_stop_codon	2477393..2477395(-)		WP_001831857.1	CapA family protein	99.1	55.4	38.2
MGA_2515	LOCUS_24740	sequence1:2480699..2480971(+)	internal_stop_codon	2480969..2480971(+)		WP_011020315.1	IS200/IS605-like element ISMac7 family transposase	93.3	63.4	42.9
MGA_2536	LOCUS_24950	sequence1:2502027..2503052(-)	partial			WP_018374918.1	TipAS antibiotic-recognition domain-containing protein	26.7	37.6	31.5
MGA_2538	LOCUS_24970	sequence1:2504367..2504894(+)	partial			WP_000163004.1	IS30-like element ISSmi1 family transposase	97.1	42.5	35.5
MGA_2558	LOCUS_25170	sequence1:2524046..2525446(+)	partial			WP_004113009.1	ROK family transcriptional regulator	32.8	39.2	30.3
MGA_2563	LOCUS_25220	sequence1:2529749..2530885(+)	partial			WP_055164393.1	IS30 family transposase	63.0	73.9	35.5
MGA_2566	LOCUS_25250	sequence1:2532398..2533237(-)	partial			WP_010869061.1	galactokinase	90.3	62.5	32.2
MGA_2610	LOCUS_25690	sequence1:2579525..2583028(-)	partial			WP_011068390.1	glycosyl hydrolase 53 family protein	33.6	43.1	41.7
MGA_2617	LOCUS_25760	sequence1:2591202..2592227(-)	partial			WP_011475868.1	sugar transferase	76.5	74.6	40.8
MGA_2626	LOCUS_25850	sequence1:2601357..2602970(-)	partial			WP_010965128.1	L,D-transpeptidase	23.5	43.8	41.3
MGA_2627	LOCUS_25860	sequence1:2603190..2605616(-)	partial			WP_009994355.1	glycoside hydrolase family 25 protein	22.8	30.3	38.5
MGA_2642	LOCUS_26010	sequence1:2615984..2616604(-)	partial			WP_010878284.1	L-threonylcarbamoyladenylate synthase	95.6	64.4	36.5
MGA_2643	LOCUS_26020	sequence1:2616794..2617714(+)	partial			WP_041272315.1	alpha/beta hydrolase	82.4	72.5	46.7
MGA_2646	LOCUS_26050	sequence1:2619598..2620293(-)	partial			WP_011860653.1	LytTR family DNA-binding domain-containing protein	73.2	72.2	26.6
MGA_2656	LOCUS_26150	sequence1:2628807..2629265(-)	partial			WP_000258716.1	aspartate kinase	95.4	36.4	27.4
MGA_2664	LOCUS_26230	sequence1:2633830..2634495(+)	partial			WP_003243034.1	transcriptional regulator LicR	92.8	32.0	25.7
MGA_2670	LOCUS_26290	sequence1:2640976..2641746(+)	partial			WP_011109350.1	ATP-binding protein	98.4	49.5	41.1
MGA_2672	LOCUS_26310	sequence1:2642225..2642440(+)	frameshift		2642196	WP_010977980.1	IS200/IS605-like element ISSto1 family transposase	91.5	52.2	45.2
MGA_2678	LOCUS_26370	sequence1:2648294..2649175(-)	partial			WP_003819388.1	membrane protein insertase YidC	65.2	62.5	28.4