{ "type": "genome", "identifier": "GCF_025165795.1", "organism": "Streptomyces gossypii", "title": "Streptomyces gossypii", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Nanjing Normal University", "publication": [ {} ], "properties": { "assembly_accession": "GCF_025165795.1", "bioproject": "PRJNA224116", "biosample": "SAMN22169528", "wgs_master": "JAJAGO000000000.1", "refseq_category": "reference genome", "taxid": "2883101", "species_taxid": "2883101", "organism_name": "Streptomyces gossypii", "infraspecific_name": "strain=N2-109", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2022/09/13", "asm_name": "ASM2516579v1", "asm_submitter": "Nanjing Normal University", "gbrs_paired_asm": "GCA_025165795.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/025/165/795/GCF_025165795.1_ASM2516579v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "7518892", "genome_size_ungapped": "7518862", "gc_percent": "70.500000", "replicon_count": "0", "scaffold_count": "49", "contig_count": "49", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_025165795.1-RS_2024_09_24", "annotation_date": "2024-09-24", "total_gene_count": "6803", "protein_coding_gene_count": "6578", "non_coding_gene_count": "73", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2022-09-13", "dateModified": "2022-09-13", "datePublished": "2022-09-13", "_annotation": { "sample_count": 1, "sample_organism": [ "Streptomyces gossypii" ], "sample_taxid": [ "2883101" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "China: Xinjiang" 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"below_threshold" }, { "organism_name": "Streptomyces oryzae", "strain": "strain=S16-07", "accession": "GCA_017676365.1", "taxid": 1434886, "species_taxid": 1434886, "relation_to_type": "type", "validated": true, "ani": 80.4356, "matched_fragments": 1072, "total_fragments": 2484, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces gobiensis", "strain": "strain=1_25", "accession": "GCA_021216675.1", "taxid": 2875706, "species_taxid": 2875706, "relation_to_type": "type", "validated": true, "ani": 80.3964, "matched_fragments": 931, "total_fragments": 2484, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces durbertensis", "strain": "strain=DSM 104538", "accession": "GCA_014156695.1", "taxid": 2448886, "species_taxid": 2448886, "relation_to_type": "type", "validated": true, "ani": 80.302, "matched_fragments": 791, "total_fragments": 2484, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces palmae", "strain": "strain=JCM 31289", "accession": "GCA_004684805.1", "taxid": 1701085, "species_taxid": 1701085, "relation_to_type": "type", "validated": true, "ani": 80.275, "matched_fragments": 925, "total_fragments": 2484, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces purpurogeneiscleroticus", "strain": "strain=DSM 43156", "accession": "GCA_020024005.1", "taxid": 68259, "species_taxid": 68259, "relation_to_type": "type", "validated": true, "ani": 80.2493, "matched_fragments": 997, "total_fragments": 2484, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces violens", "strain": "strain=NRRL ISP-5597", "accession": "GCA_000717745.1", "taxid": 66377, "species_taxid": 66377, "relation_to_type": "type", "validated": true, "ani": 80.098, "matched_fragments": 1067, "total_fragments": 2484, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces rimosus subsp. rimosus", "strain": "strain=NRRL ISP-5260", "accession": "GCA_000717285.1", "taxid": 132474, "species_taxid": 1927, "relation_to_type": "type", "validated": true, "ani": 80.0413, "matched_fragments": 1071, "total_fragments": 2484, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces paromomycinus", "strain": "strain=NBRC 15454", "accession": "GCA_003865155.1", "taxid": 92743, "species_taxid": 92743, "relation_to_type": "type", "validated": true, "ani": 80.0229, "matched_fragments": 1146, "total_fragments": 2484, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces griseocarneus", "strain": "strain=CGMCC4.1088", "accession": "GCA_020093395.1", "taxid": 51201, "species_taxid": 51201, "relation_to_type": "type", "validated": true, "ani": 80.0034, "matched_fragments": 972, "total_fragments": 2484, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces sparsogenes", "strain": "strain=ATCC 25498", "accession": "GCA_001704635.1", "taxid": 67365, "species_taxid": 67365, "relation_to_type": "type", "validated": true, "ani": 79.9857, "matched_fragments": 1138, "total_fragments": 2484, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces varsoviensis", "strain": "strain=NRRL B-3589", "accession": "GCA_000719255.1", "taxid": 67373, "species_taxid": 67373, "relation_to_type": "type", "validated": true, "ani": 79.9697, "matched_fragments": 1075, "total_fragments": 2484, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces xinghaiensis", "strain": "strain=S187", "accession": "GCA_000220705.2", "taxid": 1038928, "species_taxid": 1038928, "relation_to_type": "type", "validated": true, "ani": 79.9678, "matched_fragments": 1053, "total_fragments": 2484, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces rapamycinicus", "strain": "strain=NRRL 5491", "accession": "GCA_024298965.1", "taxid": 1226757, "species_taxid": 1226757, "relation_to_type": "type", "validated": true, "ani": 79.9511, "matched_fragments": 1220, "total_fragments": 2484, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces griseocarneus", "strain": "strain=JCM 4580", "accession": "GCA_014655595.1", "taxid": 51201, "species_taxid": 51201, "relation_to_type": "type", "validated": true, "ani": 79.94, "matched_fragments": 975, "total_fragments": 2484, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces monomycini", "strain": "strain=NRRL B-24309", "accession": "GCA_000715845.1", "taxid": 371720, "species_taxid": 371720, "relation_to_type": "type", "validated": true, "ani": 79.9073, "matched_fragments": 1088, "total_fragments": 2484, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces albireticuli", "strain": "strain=NRRL B1670", "accession": "GCA_021228125.1", "taxid": 1940, "species_taxid": 1940, "relation_to_type": "type", "validated": true, "ani": 79.8824, "matched_fragments": 1050, "total_fragments": 2484, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces monomycini", "strain": "strain=NRRL B-24309", "accession": "GCA_022271435.1", "taxid": 371720, "species_taxid": 371720, "relation_to_type": "type", "validated": true, "ani": 79.8475, "matched_fragments": 1109, "total_fragments": 2484, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces mashuensis", "strain": "strain=JCM 4059", "accession": "GCA_014654785.1", "taxid": 33904, "species_taxid": 33904, "relation_to_type": "type", "validated": true, "ani": 79.833, "matched_fragments": 931, "total_fragments": 2484, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces huiliensis", "strain": "strain=SCA2-4", "accession": "GCA_020037025.1", "taxid": 2876027, "species_taxid": 2876027, "relation_to_type": "type", "validated": true, "ani": 79.7699, "matched_fragments": 908, "total_fragments": 2484, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces kanamyceticus", "strain": "strain=ATCC 12853", "accession": "GCA_008704495.1", "taxid": 1967, "species_taxid": 1967, "relation_to_type": "type", "validated": true, "ani": 79.6244, "matched_fragments": 1084, "total_fragments": 2484, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces kanamyceticus", "strain": "strain=NRRL B-2535", "accession": "GCA_001418465.1", "taxid": 1967, "species_taxid": 1967, "relation_to_type": "type", "validated": true, "ani": 79.5711, "matched_fragments": 996, "total_fragments": 2484, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces yokosukanensis", "strain": "strain=DSM 40224", "accession": "GCA_001514035.1", "taxid": 67386, "species_taxid": 67386, "relation_to_type": "type", "validated": true, "ani": 79.3288, "matched_fragments": 1025, "total_fragments": 2484, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Actinacidiphila glaucinigra", "strain": "strain=CGMCC 4.1858", "accession": "GCA_900188405.1", "taxid": 235986, "species_taxid": 235986, "relation_to_type": "type", "validated": true, "ani": 79.2961, "matched_fragments": 1033, "total_fragments": 2484, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces smaragdinus", "strain": "strain=RB5", "accession": "GCA_009604385.1", "taxid": 2585196, "species_taxid": 2585196, "relation_to_type": "type", "validated": true, "ani": 79.1251, "matched_fragments": 921, "total_fragments": 2484, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 5.21, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_000424825.1", "gtdb_species": "s__Streptomyces sp000424825", "ani": 86.1689, "matched_fragments": 1583, "total_fragments": 2484, "gtdb_taxonomy": 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