{ "type": "genome", "identifier": "GCF_025244665.1", "organism": "Maribacter litopenaei", "title": "Maribacter litopenaei", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Seoul National University", "publication": [ {} ], "properties": { "assembly_accession": "GCF_025244665.1", "bioproject": "PRJNA224116", "biosample": "SAMN30589494", "wgs_master": "na", "refseq_category": "reference genome", "taxid": "2976127", "species_taxid": "2976127", "organism_name": "Maribacter litopenaei", "infraspecific_name": "strain=HL-LV01", "isolate": "na", "version_status": "latest", "assembly_level": "Complete Genome", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2022/09/17", "asm_name": "ASM2524466v1", "asm_submitter": "Seoul National University", "gbrs_paired_asm": "GCA_025244665.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/025/244/665/GCF_025244665.1_ASM2524466v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "3864532", "genome_size_ungapped": "3864532", "gc_percent": "40.000000", "replicon_count": "1", "scaffold_count": "1", "contig_count": "1", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_025244665.1-RS_2024_03_28", "annotation_date": "2024-03-28", "total_gene_count": "4379", "protein_coding_gene_count": "3537", "non_coding_gene_count": "49", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2022-09-17", "dateModified": "2022-09-17", "datePublished": "2022-09-17", "_annotation": { "sample_count": 1, "sample_organism": [ "Maribacter litopenaei" ], "sample_taxid": [ "2976127" ], "sample_host_organism": [ "Penaeus vannamei" ], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "South 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"strain=DSM 16471", "accession": "GCA_900109345.1", "taxid": 228957, "species_taxid": 228957, "relation_to_type": "type", "validated": true, "ani": 76.9462, "matched_fragments": 201, "total_fragments": 1288, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Muricauda flava", "strain": "strain=DSM 22638", "accession": "GCA_900129665.1", "taxid": 570519, "species_taxid": 570519, "relation_to_type": "type", "validated": true, "ani": 76.8482, "matched_fragments": 95, "total_fragments": 1288, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Zobellia roscoffensis", "strain": "strain=Asnod1-F08", "accession": "GCA_015330165.1", "taxid": 2779508, "species_taxid": 2779508, "relation_to_type": "type", "validated": true, "ani": 76.8344, "matched_fragments": 134, "total_fragments": 1288, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Croceivirga lutea", "strain": "strain=CSW06", "accession": "GCA_014235875.1", "taxid": 1775167, 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119, "total_fragments": 1288, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pricia antarctica", "strain": "strain=DSM 23421", "accession": "GCA_900101815.1", "taxid": 641691, "species_taxid": 641691, "relation_to_type": "type", "validated": true, "ani": 76.219, "matched_fragments": 93, "total_fragments": 1288, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 87.5, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_008386635.1", "gtdb_species": "s__Maribacter flavus", "ani": 81.7216, "matched_fragments": 841, "total_fragments": 1288, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Maribacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "96.59", "min_intra_species_ani": "96.59", "mean_intra_species_af": "0.88", "min_intra_species_af": "0.88", "num_clustered_genomes": 2, "status": "-" }, { "accession": 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