{ "type": "genome", "identifier": "GCF_025562755.1", "organism": "Endozoicomonas euniceicola", "title": "Endozoicomonas euniceicola", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Academia sinica", "publication": [ {} ], "properties": { "assembly_accession": "GCF_025562755.1", "bioproject": "PRJNA224116", "biosample": "SAMN30403240", "wgs_master": "na", "refseq_category": "reference genome", "taxid": "1234143", "species_taxid": "1234143", "organism_name": "Endozoicomonas euniceicola", "infraspecific_name": "strain=EF212", "isolate": "na", "version_status": "latest", "assembly_level": "Complete Genome", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2022/10/04", "asm_name": "ASM2556275v1", "asm_submitter": "Academia sinica", "gbrs_paired_asm": "GCA_025562755.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/025/562/755/GCF_025562755.1_ASM2556275v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "6517136", "genome_size_ungapped": "6517136", "gc_percent": "48.500000", "replicon_count": "1", "scaffold_count": "1", "contig_count": "1", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_025562755.1-RS_2024_11_18", "annotation_date": "2024-11-18", "total_gene_count": "5433", "protein_coding_gene_count": "5185", "non_coding_gene_count": "135", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2022-10-04", "dateModified": "2022-10-04", "datePublished": "2022-10-04", "_annotation": { "sample_count": 1, "sample_organism": [ "Endozoicomonas euniceicola" ], "sample_taxid": [ "1234143" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "USA: Florida" ], "sample_host_location_id": [], "data_size": "1.733 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "6517136", "Number of Sequences": "1", "Longest Sequences (bp)": "6517136", "N50 (bp)": "6517136", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "48.3", "Number of CDSs": "5098", "Average Protein Length": "355.2", "Coding Ratio (%)": "83.4", "Number of rRNAs": "26", "Number of tRNAs": "104", "Number of CRISPRs": "9" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Endozoicomonas montiporae", "strain": "strain=LMG 24815", "accession": "GCA_000722565.1", "taxid": 1027273, "species_taxid": 1027273, "relation_to_type": "type", "validated": true, "ani": 81.4145, "matched_fragments": 829, "total_fragments": 2172, "ani_threshold": 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