{
    "type": "genome",
    "identifier": "GCF_025567315.1",
    "organism": "Agathobaculum ammoniilyticum",
    "title": "Agathobaculum ammoniilyticum",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "UniKlinik RWTH Aachen",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_025567315.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN30962670",
        "wgs_master": "JAOQJE000000000.1",
        "refseq_category": "reference genome",
        "taxid": "2981778",
        "species_taxid": "2981778",
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        "infraspecific_name": "strain=Sanger_34",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Scaffold",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/10/04",
        "asm_name": "ASM2556731v1",
        "asm_submitter": "UniKlinik RWTH Aachen",
        "gbrs_paired_asm": "GCA_025567315.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/025/567/315/GCF_025567315.1_ASM2556731v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "2999081",
        "genome_size_ungapped": "2991487",
        "gc_percent": "57.000000",
        "replicon_count": "0",
        "scaffold_count": "52",
        "contig_count": "52",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_025567315.1-RS_2024_12_11",
        "annotation_date": "2024-12-11",
        "total_gene_count": "3117",
        "protein_coding_gene_count": "3004",
        "non_coding_gene_count": "61",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-10-04",
    "dateModified": "2022-10-04",
    "datePublished": "2022-10-04",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Agathobaculum ammoniilyticum"
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        "sample_taxid": [
            "2981778"
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        "sample_host_organism": [
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        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "United Kingdom"
        ],
        "sample_host_location_id": [],
        "data_size": "0.846 MB",
        "sample_ph_range": {
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            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
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        "Total Sequence Length (bp)": "2999081",
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        "Longest Sequences (bp)": "500229",
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        "Gap Ratio (%)": "0.253444",
        "GCcontent (%)": "57.1",
        "Number of CDSs": "3033",
        "Average Protein Length": "285.1",
        "Coding Ratio (%)": "86.5",
        "Number of rRNAs": "4",
        "Number of tRNAs": "54",
        "Number of CRISPRs": "0"
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    "has_analysis": true,
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            {
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                "taxid": 39484,
                "species_taxid": 39484,
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            {
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                "ani_threshold": 95,
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                "organism_name": "Dysosmobacter welbionis",
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                "species_taxid": 2093857,
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                "matched_fragments": 64,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Butyricicoccus pullicaecorum",
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                "accession": "GCA_900167005.1",
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                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
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    "_bac2feature": {
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}