{ "tc_result": [ { "organism_name": "Propionivibrio dicarboxylicus", "strain": "strain=DSM 5885", "accession": "GCA_900099695.1", "taxid": 83767, "species_taxid": 83767, "relation_to_type": "type", "validated": true, "ani": 78.1301, "matched_fragments": 359, "total_fragments": 1567, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Propionivibrio limicola", "strain": "strain=GolChi1", "accession": "GCA_009469695.1", "taxid": 167645, "species_taxid": 167645, "relation_to_type": "type", "validated": true, "ani": 78.1209, "matched_fragments": 281, "total_fragments": 1567, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhodocyclus purpureus", "strain": "strain=DSM 168", "accession": "GCA_016653115.1", "taxid": 1067, "species_taxid": 1067, "relation_to_type": "type", "validated": true, "ani": 77.8824, "matched_fragments": 222, "total_fragments": 1567, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhodocyclus tenuis", 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"ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paraburkholderia podalyriae", "strain": "strain=WC7.3b", "accession": "GCA_014397785.1", "taxid": 1938811, "species_taxid": 1938811, "relation_to_type": "type", "validated": true, "ani": 76.2434, "matched_fragments": 108, "total_fragments": 1567, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Achromobacter kerstersii", "strain": "strain=LMG 3441", "accession": "GCA_902859595.1", "taxid": 1353890, "species_taxid": 1353890, "relation_to_type": "type", "validated": true, "ani": 76.165, "matched_fragments": 81, "total_fragments": 1567, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Vogesella urethralis", "strain": "strain=YM-1", "accession": "GCA_007644045.2", "taxid": 2592656, "species_taxid": 2592656, "relation_to_type": "type", "validated": true, "ani": 76.1517, "matched_fragments": 63, "total_fragments": 1567, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paraburkholderia saeva", "strain": "strain=LMG 31841", "accession": "GCA_907164555.1", "taxid": 2777537, "species_taxid": 2777537, "relation_to_type": "type", "validated": true, "ani": 76.1516, "matched_fragments": 92, "total_fragments": 1567, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Chromobacterium piscinae", "strain": "strain=DSM 23278", "accession": "GCA_021129175.1", "taxid": 686831, "species_taxid": 686831, "relation_to_type": "type", "validated": true, "ani": 76.1128, "matched_fragments": 92, "total_fragments": 1567, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Massilia agri", "strain": "strain=JCM 31661", "accession": "GCA_024753255.1", "taxid": 1886785, "species_taxid": 1886785, "relation_to_type": "type", "validated": true, "ani": 76.0157, "matched_fragments": 90, "total_fragments": 1567, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Achromobacter piechaudii", "strain": "strain=LMG 1873", "accession": "GCA_902859685.1", "taxid": 72556, "species_taxid": 72556, "relation_to_type": "type", "validated": true, "ani": 75.985, "matched_fragments": 87, "total_fragments": 1567, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paludibacterium paludis", "strain": "strain=BCRC 80514", "accession": "GCA_018802605.1", "taxid": 1225769, "species_taxid": 1225769, "relation_to_type": "type", "validated": true, "ani": 75.9044, "matched_fragments": 72, "total_fragments": 1567, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aquitalea magnusonii", "strain": "strain=DSM 25134", "accession": "GCA_003202035.1", "taxid": 332411, "species_taxid": 332411, "relation_to_type": "suspected-type", "validated": true, "ani": 75.8748, "matched_fragments": 53, "total_fragments": 1567, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Achromobacter piechaudii", "strain": "strain=NBRC 102461", "accession": "GCA_001571245.1", "taxid": 72556, "species_taxid": 72556, "relation_to_type": "type", "validated": true, "ani": 75.7721, "matched_fragments": 87, "total_fragments": 1567, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paludibacterium paludis", "strain": "strain=KCTC 32182", "accession": "GCA_014652495.1", "taxid": 1225769, "species_taxid": 1225769, "relation_to_type": "type", "validated": true, "ani": 75.6161, "matched_fragments": 71, "total_fragments": 1567, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCA_017995515.1", "gtdb_species": "s__Propionivibrio sp017995515", "ani": 78.3664, "matched_fragments": 384, "total_fragments": 1567, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Rhodocyclaceae;g__Propionivibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", 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75.919, "matched_fragments": 73, "total_fragments": 1567, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Chromobacteriaceae;g__Paludibacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_003202035.1", "gtdb_species": "s__Aquitalea magnusonii", "ani": 75.8748, "matched_fragments": 53, "total_fragments": 1567, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Chromobacteriaceae;g__Aquitalea", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.21", "min_intra_species_ani": "98.53", "mean_intra_species_af": "0.95", "min_intra_species_af": "0.91", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_009856625.1", "gtdb_species": "s__Aquitalea denitrificans", "ani": 75.5666, "matched_fragments": 56, "total_fragments": 1567, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Chromobacteriaceae;g__Aquitalea", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }