{ "type": "genome", "identifier": "GCF_025821685.1", "organism": "Mycolicibacter algericus DSM 45454", "title": "Mycolicibacter algericus DSM 45454", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Uppsala University", "publication": [ {} ], "properties": { "assembly_accession": "GCF_025821685.1", "bioproject": "PRJNA224116", "biosample": "SAMN15569000", "wgs_master": "JACKSG000000000.1", "refseq_category": "na", "taxid": "723879", "species_taxid": "1288388", "organism_name": "Mycolicibacter algericus DSM 45454", "infraspecific_name": "strain=DSM 45454", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2022/10/24", "asm_name": "ASM2582168v1", "asm_submitter": "Uppsala University", "gbrs_paired_asm": "GCA_025821685.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/025/821/685/GCF_025821685.1_ASM2582168v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "4761798", "genome_size_ungapped": "4761798", "gc_percent": "68.500000", "replicon_count": "0", "scaffold_count": "352", "contig_count": "352", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_025821685.1-RS_2024_12_23", "annotation_date": "2024-12-23", "total_gene_count": "4783", "protein_coding_gene_count": "4485", "non_coding_gene_count": "57", "pubmed_id": "36243697" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2022-10-24", "dateModified": "2022-10-24", "datePublished": "2022-10-24", "_annotation": { "sample_count": 1, "sample_organism": [ "Mycolicibacter algericus DSM 45454" ], "sample_taxid": [ "723879" ], "sample_host_organism": [ "goat" ], "sample_host_organism_id": [], "sample_host_disease": [], 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"total_fragments": 1503, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacter kumamotonensis", "strain": "strain=CST 7247", "accession": "GCA_010093495.1", "taxid": 354243, "species_taxid": 354243, "relation_to_type": "type", "validated": true, "ani": 87.4123, "matched_fragments": 1192, "total_fragments": 1503, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacter kumamotonensis", "strain": "strain=DSM 45093", "accession": "GCA_002086285.1", "taxid": 354243, "species_taxid": 354243, "relation_to_type": "type", "validated": true, "ani": 87.3312, "matched_fragments": 1194, "total_fragments": 1503, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacter longobardus", "strain": "strain=DSM 45394", "accession": "GCA_002102265.1", "taxid": 1108812, "species_taxid": 1108812, "relation_to_type": "type", "validated": true, "ani": 86.2266, "matched_fragments": 1130, "total_fragments": 1503, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacter nonchromogenicus", "strain": "strain=DSM 44164", "accession": "GCA_002101775.1", "taxid": 1782, "species_taxid": 1782, "relation_to_type": "type", "validated": true, "ani": 84.2422, "matched_fragments": 1093, "total_fragments": 1503, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycobacterium palustre", "strain": "strain=DSM 44572", "accession": "GCA_002101785.1", "taxid": 153971, "species_taxid": 153971, "relation_to_type": "type", "validated": true, "ani": 80.0842, "matched_fragments": 741, "total_fragments": 1503, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycobacterium crocinum", "strain": "strain=JCM 16369", "accession": "GCA_022370635.3", "taxid": 388459, "species_taxid": 388459, "relation_to_type": "type", "validated": true, "ani": 79.2802, "matched_fragments": 669, "total_fragments": 1503, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycobacterium pallens", "strain": "strain=JCM 16370", "accession": "GCA_019456675.1", "taxid": 370524, "species_taxid": 370524, "relation_to_type": "type", "validated": true, "ani": 79.2762, "matched_fragments": 687, "total_fragments": 1503, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium fortuitum subsp. fortuitum", "strain": "strain=JCM 6387", "accession": "GCA_022179545.1", "taxid": 144549, "species_taxid": 1766, "relation_to_type": "type", "validated": true, "ani": 79.1509, "matched_fragments": 651, "total_fragments": 1503, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycobacterium angelicum", "strain": "strain=DSM 45057", "accession": "GCA_002086155.1", "taxid": 470074, "species_taxid": 470074, "relation_to_type": "type", "validated": true, "ani": 79.1241, "matched_fragments": 703, "total_fragments": 1503, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": 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