{ "type": "genome", "identifier": "GCF_025822265.1", "organism": "Mycolicibacterium brisbanense", "title": "Mycolicibacterium brisbanense", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Uppsala University", "publication": [ {} ], "properties": { "assembly_accession": "GCF_025822265.1", "bioproject": "PRJNA224116", "biosample": "SAMN15568968", "wgs_master": "JACKTM000000000.1", "refseq_category": "na", "taxid": "146020", "species_taxid": "146020", "organism_name": "Mycolicibacterium brisbanense", "infraspecific_name": "strain=DSM 44680", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2022/10/24", "asm_name": "ASM2582226v1", "asm_submitter": "Uppsala University", "gbrs_paired_asm": "GCA_025822265.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/025/822/265/GCF_025822265.1_ASM2582226v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "7389371", "genome_size_ungapped": "7388890", "gc_percent": "66.500000", "replicon_count": "0", "scaffold_count": "79", "contig_count": "79", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_025822265.1-RS_2024_12_23", "annotation_date": "2024-12-23", "total_gene_count": "7196", "protein_coding_gene_count": "7023", "non_coding_gene_count": "57", "pubmed_id": "36243697" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2022-10-24", "dateModified": "2022-10-24", "datePublished": "2022-10-24", "_annotation": { "sample_count": 1, "sample_organism": [ "Mycolicibacterium brisbanense" ], "sample_taxid": [ "146020" ], "sample_host_organism": [ "Homo sapiens" ], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], 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"ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium neworleansense", "strain": "strain=type strain: ATCC 49404", "accession": "GCA_001245615.1", "taxid": 146018, "species_taxid": 146018, "relation_to_type": "type", "validated": true, "ani": 81.9796, "matched_fragments": 1301, "total_fragments": 2428, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium boenickei", "strain": "strain=JCM 15653", "accession": "GCA_010731295.1", "taxid": 146017, "species_taxid": 146017, "relation_to_type": "type", "validated": true, "ani": 81.9738, "matched_fragments": 1305, "total_fragments": 2428, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium houstonense", "strain": "strain=type strain: ATCC 49403", "accession": "GCA_900078665.2", "taxid": 146021, "species_taxid": 146021, "relation_to_type": "type", "validated": true, "ani": 81.8641, "matched_fragments": 1259, "total_fragments": 2428, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium fortuitum subsp. acetamidolyticum", "strain": "strain=JCM6368", "accession": "GCA_001570465.1", "taxid": 144550, "species_taxid": 1766, "relation_to_type": "type", "validated": true, "ani": 81.7777, "matched_fragments": 1228, "total_fragments": 2428, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "[Mycobacterium] fortunisiensis", "strain": "strain=TNTM28", "accession": "GCA_019050325.1", "taxid": 2600579, "species_taxid": 2600579, "relation_to_type": "type", "validated": true, "ani": 81.7432, "matched_fragments": 1124, "total_fragments": 2428, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium wolinskyi", "strain": "strain=ATCC 700010", "accession": "GCA_002101965.1", "taxid": 59750, "species_taxid": 59750, "relation_to_type": "type", "validated": true, "ani": 81.6624, "matched_fragments": 1361, "total_fragments": 2428, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium conceptionense", "strain": "strain=CCUG 50187", "accession": "GCA_002102065.1", "taxid": 451644, "species_taxid": 451644, "relation_to_type": "suspected-type", "validated": true, "ani": 81.6213, "matched_fragments": 1253, "total_fragments": 2428, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium fortuitum subsp. fortuitum", "strain": "strain=JCM 6387", "accession": "GCA_022179545.1", "taxid": 144549, "species_taxid": 1766, "relation_to_type": "type", "validated": true, "ani": 81.5843, "matched_fragments": 1193, "total_fragments": 2428, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium peregrinum", "strain": "strain=DSM 43271", "accession": "GCA_002102345.1", "taxid": 43304, "species_taxid": 43304, "relation_to_type": "type", "validated": true, "ani": 81.568, "matched_fragments": 1250, "total_fragments": 2428, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium lutetiense", "strain": "strain=DSM 46713", "accession": "GCA_017876775.1", "taxid": 1641992, "species_taxid": 1641992, "relation_to_type": "type", "validated": true, "ani": 81.5062, "matched_fragments": 1153, "total_fragments": 2428, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium alvei", "strain": "strain=JCM 12272", "accession": "GCA_010727325.1", "taxid": 67081, "species_taxid": 67081, "relation_to_type": "type", "validated": true, "ani": 81.3887, "matched_fragments": 1100, "total_fragments": 2428, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium llatzerense", "strain": "strain=MG13", "accession": "GCA_025331195.1", "taxid": 280871, "species_taxid": 280871, "relation_to_type": "type", "validated": true, "ani": 80.1199, "matched_fragments": 916, "total_fragments": 2428, "ani_threshold": 95, "status": 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