# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_2	LOCUS_00010	sequence01:126..725(+)	partial			WP_003414864.1	IS21-like element ISMbo1 family transposase	98.0	46.5	43.4
MGA_3	LOCUS_00020	sequence01:725..1036(+)	internal_stop_codon	1034..1036(+)		WP_000544830.1	IS21-like element IS21 family helper ATPase IstB	75.7	29.4	34.6
MGA_19	LOCUS_00140	sequence05:2128..2394(+)	partial			WP_024318137.1	IS21-like element helper ATPase IstB	76.1	27.0	43.3
MGA_34	LOCUS_00280	sequence06:890..1153(+)	partial			WP_011727669.1	nuclear transport factor 2 family protein	97.7	69.4	58.1
MGA_46	LOCUS_00380	sequence07:6857..7489(-)	partial			WP_005079730.1	TetR/AcrR family transcriptional regulator	64.8	69.0	30.0
MGA_48	LOCUS_00400	sequence07:8039..8914(+)	partial			WP_005076519.1	alpha/beta hydrolase	92.8	74.4	27.5
MGA_65	LOCUS_00570	sequence07:26527..27372(-)	frameshift		27485	WP_211285741.1	IS3 family transposase	100.0	73.2	78.6
MGA_67	LOCUS_00590	sequence07:27852..28862(-)	partial			WP_048053708.1	N-6 DNA methylase	78.0	21.8	28.1
MGA_73	LOCUS_00650	sequence07:32437..33315(+)	partial			WP_005112261.1	cytochrome c biogenesis CcdA family protein	74.3	76.3	30.9
MGA_76	LOCUS_00680	sequence07:36115..37242(-)	partial			WP_014855724.1	N-6 DNA methylase	80.5	29.8	30.0
MGA_99	LOCUS_00910	sequence09:1..2921(+)	partial			WP_010908855.1	type I polyketide synthase	59.4	38.7	43.8
MGA_101	LOCUS_00920	sequence10:92..2290(+)	partial			WP_010886158.1	phthiocerol type I polyketide synthase PpsA	87.8	33.5	64.6
MGA_102	LOCUS_00930	sequence10:2221..2580(+)	partial			WP_010908853.1	type I polyketide synthase	89.9	5.9	65.4
MGA_103	LOCUS_00940	sequence10:2867..3154(+)	frameshift,internal_stop_codon	3084..3086(+)	3095	WP_003899549.1	phthiocerol type I polyketide synthase PpsD	84.2	4.4	61.7
MGA_104	LOCUS_00950	sequence10:3112..6174(+)	frameshift,internal_stop_codon	3084..3086(+)	6159,3095	WP_003899549.1	phthiocerol type I polyketide synthase PpsD	95.7	54.0	47.6
MGA_160	LOCUS_01510	sequence10:73831..74250(+)	partial			WP_010979840.1	CBS domain-containing protein	71.2	76.0	35.4
MGA_168	LOCUS_01590	sequence10:81840..82760(-)	partial			WP_011228982.1	DUF1028 domain-containing protein	63.7	67.6	45.6
MGA_182	LOCUS_01730	sequence10:94359..94967(-)	partial			WP_193487124.1	TetR family transcriptional regulator	70.3	59.2	37.3
MGA_192	LOCUS_01830	sequence10:105565..106059(+)	partial			WP_003410762.1	DUF4333 domain-containing protein	72.0	48.8	44.5
MGA_195	LOCUS_01860	sequence10:108978..109307(+)	partial			WP_011726633.1	WhiB family transcriptional regulator	67.9	76.3	68.9
MGA_227	LOCUS_02180	sequence10:140615..141073(+)	partial			WP_005062106.1	transglycosylase family protein	57.9	58.7	73.9
MGA_267	LOCUS_02580	sequence10:176218..177522(-)	partial			WP_003901256.1	PPE family protein	71.9	46.0	42.2
MGA_268	LOCUS_02590	sequence10:177819..178586(+)	partial			WP_003854724.1	HNH endonuclease family protein	71.4	70.9	53.3
MGA_270	LOCUS_02610	sequence10:180256..180459(+)	partial			WP_003899418.1	helix-turn-helix domain-containing protein	86.6	67.4	58.6
MGA_274	LOCUS_02650	sequence10:183009..183473(+)	partial			WP_005112930.1	class I SAM-dependent methyltransferase	93.5	64.0	49.3
MGA_275	LOCUS_02660	sequence10:183644..184300(+)	partial			WP_073792743.1	TnsA-like heteromeric transposase endonuclease subunit	89.4	70.4	39.7
MGA_300	LOCUS_02910	sequence12:10887..12182(+)	partial			WP_011087566.1	glutaminase A	83.1	59.9	49.1
MGA_361	LOCUS_03520	sequence12:77619..78680(+)	partial			WP_003409337.1	adhesin Apa	49.9	55.7	69.6
MGA_369	LOCUS_03600	sequence12:88657..90459(+)	partial			WP_012257623.1	NAD-binding protein	17.0	18.1	38.2
MGA_370	LOCUS_03610	sequence12:90515..92008(+)	partial			WP_010886110.1	serine/threonine protein kinase PknH	54.5	40.9	26.2
MGA_379	LOCUS_03700	sequence12:100463..100678(-)	partial			WP_003895017.1	(2Fe-2S)-binding protein	71.8	73.9	58.8
MGA_383	LOCUS_03740	sequence12:103885..104328(-)	internal_stop_codon	104371..104373(-)		WP_003409420.1	resuscitation-promoting factor RpfC	64.6	54.0	67.4
MGA_386	LOCUS_03770	sequence12:106215..107063(+)	partial			WP_003899065.1	hypothetical protein	39.4	29.2	36.0
MGA_394	LOCUS_03850	sequence12:111760..112020(-)	frameshift		112060	WP_003905677.1	macro domain-containing protein	100.0	25.1	69.8
MGA_398	LOCUS_03890	sequence12:114155..114430(+)	partial			WP_003409536.1	MTH1187 family thiamine-binding protein	82.4	73.5	73.3
MGA_401	LOCUS_03920	sequence12:117288..117824(-)	partial			WP_003900428.1	hypothetical protein	64.6	75.0	55.1
MGA_407	LOCUS_03980	sequence12:123340..123888(+)	partial			WP_003411668.1	hypothetical protein	68.7	72.0	51.6
MGA_413	LOCUS_04040	sequence12:128418..129362(+)	frameshift		129338	WP_010970357.1	nucleobase:cation symporter-2 family protein	96.2	61.6	48.3
MGA_414	LOCUS_04050	sequence12:129323..129748(+)	frameshift		129338	WP_010970357.1	nucleobase:cation symporter-2 family protein	88.7	25.5	59.2
MGA_418	LOCUS_04090	sequence12:132834..133757(+)	partial			WP_062284982.1	peptidoglycan DD-metalloendopeptidase family protein	41.0	38.4	40.9
MGA_421	LOCUS_04120	sequence12:135721..136194(+)	partial			WP_003400664.1	SRPBCC family protein	97.5	69.2	71.0
MGA_444	LOCUS_04350	sequence12:155756..157429(-)	partial			WP_003401488.1	type VII secretion system ESX-3 target PPE4	52.1	54.4	42.2
MGA_447	LOCUS_04380	sequence13:1..706(+)	partial			WP_010950653.1	alpha/beta hydrolase	58.1	20.6	39.0
MGA_458	LOCUS_04490	sequence13:9185..9739(-)	partial			WP_011730307.1	hypothetical protein	93.5	66.7	33.1
MGA_460	LOCUS_04510	sequence13:10130..12232(-)	partial			WP_011730306.1	EspA/EspE family type VII secretion system effector	71.1	64.0	37.1
MGA_469	LOCUS_04600	sequence13:24011..25351(+)	partial			WP_011727070.1	PPE family protein	48.0	41.1	46.0
MGA_476	LOCUS_04670	sequence13:31941..33206(-)	partial			WP_003414134.1	AAA family ATPase	75.5	53.0	56.9
MGA_499	LOCUS_04900	sequence13:55796..56806(+)	partial			WP_013224379.1	alpha/beta hydrolase	47.0	69.8	42.4
MGA_503	LOCUS_04940	sequence13:60982..61323(+)	partial			WP_003419814.1	hypothetical protein	46.0	43.4	57.1
MGA_516	LOCUS_05070	sequence13:72914..73624(-)	partial			WP_011731137.1	PadR family transcriptional regulator	61.0	58.5	70.8
MGA_523	LOCUS_05140	sequence13:79784..81085(-)	partial			WP_003899640.1	hypothetical protein	75.1	74.3	43.2
MGA_550	LOCUS_05410	sequence13:102391..102822(-)	partial			WP_012259124.1	GNAT family N-acetyltransferase	72.0	71.1	45.6
MGA_551	LOCUS_05420	sequence13:103402..104382(+)	partial			WP_011729718.1	NAD(P)/FAD-dependent oxidoreductase	92.9	57.5	45.5
MGA_553	LOCUS_05440	sequence13:105087..105368(+)	partial			WP_011730766.1	metallophosphoesterase family protein	90.3	56.1	30.2
MGA_578	LOCUS_05690	sequence13:132217..132519(+)	partial			WP_011731645.1	membrane protein insertion efficiency factor YidD	85.0	73.9	62.4
MGA_597	LOCUS_05880	sequence13:153041..154006(-)	partial			WP_003900793.1	LpqN/LpqT family lipoprotein	60.1	63.2	59.2
MGA_607	LOCUS_05980	sequence13:164272..166896(+)	partial			WP_031651598.1	transglycosylase/D,D-transpeptidase PonA1	73.1	77.9	81.1
MGA_619	LOCUS_06070	sequence15:2086..2334(-)	partial			WP_003894233.1	hypothetical protein	96.3	73.9	48.1
MGA_681	LOCUS_06690	sequence15:60797..61462(+)	frameshift,internal_stop_codon	60702..60704(+)	60797	WP_010886087.1	hypothetical protein	92.3	64.3	56.1
MGA_695	LOCUS_06830	sequence15:74136..74339(-)	partial			WP_011730798.1	DUF3073 domain-containing protein	56.7	66.7	86.8
MGA_738	LOCUS_07260	sequence15:118028..118636(-)	frameshift,internal_stop_codon	118668..118670(-),118629..118631(-)	118613,118598	WP_003895335.1	DUF4333 domain-containing protein	54.0	41.0	49.1
MGA_742	LOCUS_07300	sequence15:122554..124464(-)	partial			WP_003410735.1	serine/threonine protein kinase PknJ	45.4	48.9	57.9
MGA_762	LOCUS_07500	sequence15:144451..145899(-)	partial			WP_003900223.1	resuscitation-promoting factor protein RpfA	25.7	30.5	74.2
MGA_773	LOCUS_07610	sequence15:153898..154137(+)	partial			WP_003404614.1	DUF2537 domain-containing protein	79.7	67.0	65.1
MGA_801	LOCUS_07890	sequence15:183513..184199(+)	frameshift		183480,184119	WP_085976166.1	IS3 family transposase	91.7	58.0	39.8
MGA_802	LOCUS_07900	sequence15:184106..184423(+)	frameshift		184118	WP_003112560.1	IS3 family transposase	54.3	20.4	61.4
MGA_819	LOCUS_08070	sequence15:199507..200373(-)	partial			WP_005112805.1	hypothetical protein	69.8	71.4	36.3
MGA_820	LOCUS_08080	sequence15:200470..201768(-)	frameshift		201809,201831	WP_005112804.1	cytochrome P450	99.1	81.0	53.1
MGA_823	LOCUS_08110	sequence15:203864..204304(-)	partial			WP_003898648.1	poly-gamma-glutamate hydrolase family protein	92.5	38.1	70.4
MGA_830	LOCUS_08180	sequence15:213014..213787(-)	partial			WP_003898656.1	DUF4873 domain-containing protein	60.3	48.0	40.7
MGA_831	LOCUS_08190	sequence15:213784..214701(-)	partial			WP_011730613.1	diiron oxygenase	97.7	72.9	72.5
MGA_845	LOCUS_08330	sequence15:226538..226825(-)	partial			WP_003404838.1	chorismate mutase	73.7	66.7	85.7
MGA_872	LOCUS_08600	sequence15:258860..259294(+)	partial			WP_013230043.1	large-conductance mechanosensitive channel protein MscL	70.8	73.9	43.7
MGA_874	LOCUS_08620	sequence15:260072..260425(-)	partial			WP_010907580.1	zinc ribbon domain-containing protein	54.7	64.6	75.0
MGA_882	LOCUS_08700	sequence16:295..1467(-)	partial			WP_012256615.1	DNA adenine methylase	71.0	81.4	34.1
MGA_885	LOCUS_08730	sequence16:5006..7780(-)	partial			WP_011403314.1	3'-5' exonuclease	70.2	79.6	28.0
MGA_905	LOCUS_08930	sequence17:8902..9972(+)	partial			WP_003413385.1	protein translocase subunit SecD	94.4	68.6	33.2
MGA_912	LOCUS_09000	sequence17:18374..18730(+)	partial			WP_005093297.1	hypothetical protein	39.8	54.2	63.8
MGA_940	LOCUS_09280	sequence17:43094..43705(+)	partial			WP_011031656.1	hypothetical protein	56.7	80.0	43.1
MGA_950	LOCUS_09380	sequence17:49050..49766(+)	partial			WP_000275180.1	AraC family transcriptional regulator	33.2	57.2	34.2
MGA_975	LOCUS_09630	sequence17:67382..69319(+)	partial			WP_010922064.1	DEAD/DEAH box helicase	51.0	60.9	31.8
MGA_982	LOCUS_09700	sequence17:72664..74631(+)	partial			WP_082107836.1	FtsK/SpoIIIE domain-containing protein	55.0	53.8	26.6
MGA_1015	LOCUS_10030	sequence17:89594..90982(-)	partial			WP_001310055.1	RNA-guided endonuclease TnpB family protein	47.4	53.7	31.6
MGA_1054	LOCUS_10420	sequence17:115102..115371(-)	partial			WP_003403820.1	hypothetical protein	100.0	50.8	47.9
MGA_1066	LOCUS_10540	sequence17:125903..127171(+)	partial			WP_011021891.1	pentapeptide repeat-containing protein	29.1	20.7	42.1
MGA_1076	LOCUS_10640	sequence17:133879..134637(+)	partial			WP_013389567.1	HNH endonuclease family protein	73.8	75.0	49.5
MGA_1084	LOCUS_10720	sequence17:140502..141254(-)	partial			WP_010950494.1	hypothetical protein	53.6	59.5	59.4
MGA_1101	LOCUS_10890	sequence17:148685..149653(+)	partial			WP_011014435.1	NlpC/P60 family protein	92.9	51.5	24.6
MGA_1106	LOCUS_10940	sequence17:153343..154536(+)	partial			WP_003906680.1	PPE family protein	47.6	47.2	31.6
MGA_1110	LOCUS_10980	sequence17:158903..159889(+)	partial			WP_003917259.1	hypothetical protein	36.9	37.1	44.6
MGA_1123	LOCUS_11110	sequence17:165330..169058(-)	partial			WP_164930412.1	type I-U CRISPR-associated helicase/endonuclease Cas3	38.1	48.0	25.6
MGA_1140	LOCUS_11280	sequence17:184818..185795(-)	partial			WP_003399850.1	type VII secretion system ESX-1 AAA family ATPase EccA1	58.5	32.1	21.9
MGA_1160	LOCUS_11480	sequence17:194676..195572(-)	partial			WP_011727554.1	ADP-ribosylglycohydrolase family protein	98.3	62.6	45.3
MGA_1163	LOCUS_11510	sequence17:197503..197823(-)	partial			WP_011038739.1	DUF4031 domain-containing protein	51.9	62.8	50.9
MGA_1194	LOCUS_11820	sequence17:209760..211046(-)	partial			WP_130110743.1	helix-turn-helix transcriptional regulator	14.5	49.2	54.8
MGA_1206	LOCUS_11940	sequence17:217734..219758(-)	partial			WP_015775718.1	hypothetical protein	49.6	77.5	31.0
MGA_1225	LOCUS_12130	sequence17:237411..238754(+)	partial			WP_003909105.1	type VII secretion system ESX-1 associated protein EspI	63.3	41.7	28.0
MGA_1246	LOCUS_12330	sequence18:13..294(-)	partial			WP_003897998.1	ISL3-like element ISMsm4 family transposase	59.1	12.1	87.3
MGA_1298	LOCUS_12850	sequence18:65854..66552(-)	partial			WP_003901140.1	PPE family protein	83.6	52.0	28.2
MGA_1301	LOCUS_12880	sequence18:68172..68741(-)	frameshift		68764	WP_003899026.1	PPE family protein	82.5	36.9	41.0
MGA_1302	LOCUS_12890	sequence18:68738..68983(-)	frameshift		68770	WP_003409061.1	PPE family protein	86.4	15.1	57.1
MGA_1307	LOCUS_12940	sequence18:79199..81082(+)	frameshift,internal_stop_codon	79378..79380(+)	79234,79259,79503	WP_011015416.1	cytochrome b/b6 domain-containing protein	51.7	48.7	37.1
MGA_1308	LOCUS_12950	sequence18:81150..82877(+)	partial			WP_011015416.1	cytochrome b/b6 domain-containing protein	54.4	48.2	40.3
MGA_1311	LOCUS_12980	sequence18:84419..85000(-)	partial			WP_011729111.1	hypothetical protein	61.7	59.5	72.3
MGA_1323	LOCUS_13100	sequence18:94139..94615(+)	frameshift,internal_stop_codon	94084..94086(+)	94488,93981,93951	WP_145764452.1	IS3 family transposase	73.4	29.0	59.8
MGA_1324	LOCUS_13110	sequence18:94623..94862(+)	frameshift		94486	WP_173362552.1	IS3 family transposase	94.9	19.0	62.7
MGA_1325	LOCUS_13120	sequence19:111..725(+)	partial			WP_053543917.1	IS1249 family transposase	96.6	52.0	27.6
MGA_1337	LOCUS_13240	sequence19:8206..10206(-)	partial			WP_010965176.1	FtsK/SpoIIIE domain-containing protein	33.6	52.1	25.8
MGA_1346	LOCUS_13330	sequence19:19048..19818(-)	partial			WP_014855724.1	N-6 DNA methylase	78.9	20.5	30.3
MGA_1366	LOCUS_13490	sequence21:15456..16037(+)	partial			WP_005111678.1	30S ribosomal protein S16	59.6	74.2	93.9
MGA_1373	LOCUS_13560	sequence21:20006..20683(+)	internal_stop_codon	20681..20683(+),20702..20704(+)		WP_003414713.1	ribonuclease HII	96.9	84.5	74.0
MGA_1378	LOCUS_13610	sequence21:23888..24457(-)	partial			WP_010908253.1	histidine phosphatase family protein	46.0	35.2	39.8
MGA_1388	LOCUS_13710	sequence21:34134..34685(-)	partial			WP_003414678.1	M23 family metallopeptidase	77.6	57.8	72.2
MGA_1411	LOCUS_13940	sequence22:2..352(+)	frameshift		295	WP_003899549.1	phthiocerol type I polyketide synthase PpsD	86.2	5.5	57.0
MGA_1412	LOCUS_13950	sequence22:310..3168(+)	frameshift		292	WP_010950800.1	phthiocerol type I polyketide synthase PpsA	99.6	53.1	42.8
MGA_1422	LOCUS_14030	sequence24:10688..10921(-)	internal_stop_codon	10688..10690(-)		WP_205421581.1	2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase	96.1	11.5	43.2
MGA_1425	LOCUS_14060	sequence24:12323..13093(-)	partial			WP_011729363.1	OB-fold domain-containing protein	39.8	70.5	40.2
MGA_1433	LOCUS_14140	sequence24:21103..21858(-)	partial			WP_003898131.1	SDR family oxidoreductase	74.1	77.1	44.4
MGA_1455	LOCUS_14360	sequence24:43054..43611(-)	partial			WP_003418346.1	50S ribosomal protein L17	65.4	67.2	90.9
MGA_1469	LOCUS_14500	sequence24:55723..56313(-)	partial			WP_011727700.1	haloacid dehalogenase	90.8	60.9	44.4
MGA_1499	LOCUS_14800	sequence24:79864..80166(-)	partial			WP_003898560.1	30S ribosomal protein S17	94.0	69.6	84.0
MGA_1545	LOCUS_15260	sequence24:130931..131326(+)	partial			WP_011727496.1	cyclopropane mycolic acid synthase family methyltransferase	100.0	42.7	55.0
MGA_1561	LOCUS_15420	sequence24:141783..143447(+)	partial			WP_010950374.1	PPE family protein	56.7	54.3	41.8
MGA_1562	LOCUS_15430	sequence24:143444..144220(-)	partial			WP_012258317.1	class I SAM-dependent methyltransferase	72.1	73.4	52.9
MGA_1570	LOCUS_15510	sequence24:155161..155790(+)	partial			WP_011729718.1	NAD(P)/FAD-dependent oxidoreductase	97.6	40.0	56.0
MGA_1571	LOCUS_15520	sequence24:155888..157492(+)	partial			WP_010950585.1	serine/threonine protein kinase PknE	51.1	48.2	54.0
MGA_1576	LOCUS_15570	sequence24:168707..174091(+)	partial			WP_010895613.1	non-ribosomal peptide synthetase	58.6	20.1	43.5
MGA_1579	LOCUS_15600	sequence24:176549..179077(-)	partial			WP_011389453.1	lipoprotein-releasing ABC transporter permease subunit	35.2	79.6	21.6
MGA_1598	LOCUS_15790	sequence24:196590..196823(-)	partial			WP_011727568.1	ATP-binding domain-containing protein	66.2	9.3	54.9
MGA_1599	LOCUS_15800	sequence24:196787..197113(-)	partial			WP_011727558.1	nucleoside triphosphate pyrophosphohydrolase	44.4	49.0	62.5
MGA_1609	LOCUS_15900	sequence24:206454..209213(-)	partial			WP_001242210.1	AAA family ATPase	23.6	20.4	28.6
MGA_1610	LOCUS_15910	sequence24:209213..210325(-)	partial			WP_010969142.1	exonuclease SbcCD subunit D	72.7	63.0	28.0
MGA_1613	LOCUS_15940	sequence24:212554..212820(+)	partial			WP_011227971.1	type II toxin-antitoxin system VapC family toxin	84.1	56.9	43.2
MGA_1654	LOCUS_16350	sequence24:256128..256577(+)	frameshift		256475	WP_011055870.1	carotenoid oxygenase family protein	55.7	17.2	47.6
MGA_1655	LOCUS_16360	sequence24:256505..257566(+)	frameshift		256457	WP_011727738.1	carotenoid oxygenase family protein	97.2	70.9	33.4
MGA_1657	LOCUS_16380	sequence24:258031..258705(+)	partial			WP_011729186.1	oxygenase MpaB family protein	90.2	69.4	42.6
MGA_1659	LOCUS_16400	sequence24:259420..260010(-)	partial			WP_011727419.1	glycosyltransferase family 1 protein	85.2	49.1	51.1
MGA_1694	LOCUS_16750	sequence24:290876..292237(-)	partial			WP_003409061.1	PPE family protein	45.9	46.2	48.6
MGA_1698	LOCUS_16790	sequence24:295062..295409(-)	partial			WP_005089627.1	hypothetical protein	69.6	75.5	47.0
MGA_1707	LOCUS_16880	sequence24:304049..304261(-)	partial			WP_003402695.1	glutaredoxin family protein	100.0	72.2	60.0
MGA_1722	LOCUS_17030	sequence24:318798..319160(+)	partial			WP_005061963.1	SRPBCC family protein	83.3	55.2	67.3
MGA_1735	LOCUS_17160	sequence24:333177..333863(+)	frameshift		333818,333870	WP_012296722.1	TetR/AcrR family transcriptional regulator	84.6	44.3	41.5
MGA_1736	LOCUS_17170	sequence24:333860..334480(+)	partial			WP_005084765.1	TetR/AcrR family transcriptional regulator	71.8	71.6	34.0
MGA_1745	LOCUS_17260	sequence24:342913..343734(+)	partial			WP_005094761.1	hypothetical protein	56.0	55.6	45.8
MGA_1764	LOCUS_17450	sequence24:363871..364788(+)	internal_stop_codon	364786..364788(+)		WP_005079755.1	MlaD family protein	90.8	61.3	49.5
MGA_1765	LOCUS_17460	sequence24:364831..365142(+)	internal_stop_codon	364786..364788(+)		WP_005110213.1	MlaD family protein	99.0	25.3	58.8
MGA_1766	LOCUS_17470	sequence24:365165..365830(+)	partial			WP_011727450.1	hypothetical protein	64.3	62.3	46.5
MGA_1782	LOCUS_17630	sequence24:380597..381553(+)	partial			WP_041323409.1	DUF2993 domain-containing protein	76.7	72.9	50.2
MGA_1799	LOCUS_17800	sequence24:396357..397865(-)	partial			WP_003401347.1	PPE family protein	40.0	36.2	42.8
MGA_1803	LOCUS_17840	sequence24:401889..402548(-)	partial			WP_003402299.1	hypothetical protein	65.8	79.3	50.7
MGA_1815	LOCUS_17960	sequence24:414285..414659(+)	partial			WP_013224908.1	hypothetical protein	71.8	74.8	60.7
MGA_1855	LOCUS_18360	sequence24:456286..456765(+)	partial			WP_003899794.1	hypothetical protein	42.8	53.6	50.0
MGA_1856	LOCUS_18370	sequence24:456973..457560(+)	frameshift		457467	WP_162618306.1	phosphomethylpyrimidine synthase ThiC	80.0	28.9	78.3
MGA_1857	LOCUS_18380	sequence24:457524..458540(+)	frameshift		457467	WP_003900143.1	phosphomethylpyrimidine synthase ThiC	94.1	58.1	79.9
MGA_1864	LOCUS_18450	sequence24:463251..464915(+)	partial			WP_011726651.1	hypothetical protein	40.6	83.5	26.0
MGA_1869	LOCUS_18500	sequence24:470477..470896(+)	partial			WP_003410762.1	DUF4333 domain-containing protein	84.2	48.0	49.6
MGA_1885	LOCUS_18660	sequence24:482451..483143(+)	internal_stop_codon	482403..482405(+)		WP_011727189.1	hypothetical protein	97.4	78.2	43.8
MGA_1893	LOCUS_18740	sequence25:84..746(-)	partial			WP_003414864.1	IS21-like element ISMbo1 family transposase	90.5	48.7	47.8
MGA_1901	LOCUS_18810	sequence26:2752..2925(+)	partial			WP_003899614.1	ATP-binding protein	82.5	19.0	57.4
MGA_1902	LOCUS_18820	sequence26:3092..3904(+)	partial			WP_011727797.1	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(38)	94.1	66.8	54.2
MGA_1906	LOCUS_18860	sequence26:5715..6314(+)	partial			WP_003113746.1	TetR/AcrR family transcriptional regulator	27.6	28.1	45.5
MGA_1927	LOCUS_19070	sequence26:26414..26857(+)	partial			WP_005110193.1	hypothetical protein	57.8	82.7	46.5
MGA_1966	LOCUS_19460	sequence26:63760..64206(+)	partial			WP_003899161.1	hypothetical protein	84.5	65.2	37.6
MGA_2007	LOCUS_19870	sequence26:100567..102120(-)	partial			WP_011727115.1	hypothetical protein	57.4	51.1	40.1
MGA_2009	LOCUS_19890	sequence26:103456..103611(-)	partial			WP_003895789.1	excalibur calcium-binding domain-containing protein	78.4	63.5	62.5
MGA_2018	LOCUS_19980	sequence26:112065..112736(+)	partial			WP_003412695.1	hypothetical protein	63.7	60.5	39.2
MGA_2020	LOCUS_20000	sequence26:114317..114922(+)	partial			WP_003400411.1	DUF5631 domain-containing protein	97.0	52.6	41.0
MGA_2041	LOCUS_20210	sequence26:139304..140974(-)	partial			WP_010950374.1	PPE family protein	29.0	30.2	58.0
MGA_2097	LOCUS_20770	sequence26:205435..206376(+)	partial			WP_005064586.1	DUF4393 domain-containing protein	55.0	61.7	46.0
MGA_2106	LOCUS_20860	sequence26:216947..217708(-)	partial			WP_015776328.1	DUF2249 domain-containing protein	32.0	77.1	53.1
MGA_2109	LOCUS_20890	sequence26:219256..>220052(-)	partial			WP_003898977.1	HNH endonuclease signature motif containing protein	72.7	42.3	64.6
MGA_2135	LOCUS_21140	sequence27:28904..29665(-)	partial			WP_003908487.1	Ig-like domain-containing protein	97.2	69.9	80.5
MGA_2141	LOCUS_21200	sequence27:34177..35181(+)	partial			WP_000857433.1	enoyl-[acyl-carrier-protein] reductase FabK	71.0	72.2	28.9
MGA_2154	LOCUS_21330	sequence27:45882..46550(-)	partial			WP_010950707.1	hypothetical protein	64.0	78.9	45.9
MGA_2165	LOCUS_21440	sequence27:56863..57552(+)	partial			WP_011727450.1	hypothetical protein	61.1	62.7	54.5
MGA_2168	LOCUS_21470	sequence27:59099..59689(-)	partial			WP_011726697.1	hypothetical protein	74.0	77.5	41.4
MGA_2193	LOCUS_21720	sequence27:84529..86055(+)	partial			WP_003401003.1	PE-PPE domain-containing protein	73.8	71.0	46.1
MGA_2199	LOCUS_21780	sequence27:90028..90576(-)	partial			WP_003400961.1	TetR/AcrR family transcriptional regulator	90.7	58.9	43.6
MGA_2211	LOCUS_21900	sequence27:98273..98485(+)	partial			WP_003977449.1	TOBE domain-containing protein	95.7	47.5	53.7
MGA_2253	LOCUS_22320	sequence28:33351..33851(-)	internal_stop_codon	33351..33353(-)		WP_071997922.1	translation initiation factor IF-3	96.4	78.4	90.0
MGA_2262	LOCUS_22410	sequence28:43659..44096(+)	partial			WP_014877829.1	hypothetical protein	79.3	61.7	43.7
MGA_2319	LOCUS_22980	sequence28:100669..101181(+)	partial			WP_003407798.1	NlpC/P60 family peptidoglycan-binding protein RipD	91.8	67.8	64.1
MGA_2353	LOCUS_23320	sequence28:140535..141032(+)	partial			WP_086672051.1	nitroreductase family deazaflavin-dependent oxidoreductase	52.1	64.6	44.2
MGA_2453	LOCUS_24320	sequence28:244558..245391(+)	partial			WP_003412998.1	B-4DMT family transporter	70.0	84.3	55.9
MGA_2467	LOCUS_24460	sequence28:258659..259027(-)	partial			WP_029104321.1	TM2 domain-containing protein	73.0	75.2	58.8
MGA_2475	LOCUS_24540	sequence28:265077..265313(-)	partial			WP_003408840.1	effector	89.7	74.5	84.3
MGA_2503	LOCUS_24810	sequence29:25871..27190(-)	partial			WP_003403850.1	phosphoglycerate mutase PE_PGRS11	71.3	49.7	37.8
MGA_2525	LOCUS_25030	sequence29:48992..49402(-)	partial			WP_003408743.1	carboxymuconolactone decarboxylase family protein	74.3	84.9	69.3
MGA_2532	LOCUS_25100	sequence29:57547..59745(-)	partial			WP_003911223.1	hypothetical protein	19.4	27.4	36.0
MGA_2539	LOCUS_25170	sequence29:68874..71501(-)	partial			WP_003903975.1	phage/plasmid primase, P4 family	47.7	79.8	31.2
MGA_2547	LOCUS_25250	sequence29:77651..78160(+)	partial			WP_015776876.1	hypothetical protein	74.6	77.8	32.3
MGA_2555	LOCUS_25330	sequence29:84405..84872(-)	partial			WP_003416124.1	hypothetical protein	47.7	51.0	58.7
MGA_2562	LOCUS_25400	sequence29:93350..93685(+)	partial			WP_010941967.1	arsenosugar biosynthesis-associated peroxidase-like protein	69.4	70.0	46.8
MGA_2574	LOCUS_25510	sequence29:104126..104617(+)	frameshift		103938	WP_003404760.1	IS607-like element IS1535 family transposase	68.7	58.0	90.2
MGA_2581	LOCUS_25580	sequence29:114458..115108(+)	partial			WP_011026934.1	nitrate reductase molybdenum cofactor assembly chaperone	87.5	73.4	43.9
MGA_2588	LOCUS_25640	sequence30:471..680(-)	partial			WP_003410095.1	HNH endonuclease signature motif containing protein	73.9	12.2	66.7
MGA_2600	LOCUS_25760	sequence30:19650..20162(+)	partial			WP_003910562.1	HNH endonuclease	100.0	74.8	76.5
MGA_2603	LOCUS_25790	sequence30:20959..21738(+)	partial			WP_011728045.1	type VII secretion target	95.0	65.5	48.8
MGA_2670	LOCUS_26460	sequence30:92572..92808(+)	frameshift		92522	WP_003412293.1	resuscitation-promoting factor protein RpfD	100.0	48.7	48.7
MGA_2687	LOCUS_26630	sequence30:111471..112064(-)	partial			WP_003973221.1	GNAT family N-acetyltransferase	83.2	71.4	46.7
MGA_2692	LOCUS_26680	sequence30:126891..127415(+)	partial			WP_003412264.1	Low molecular weight antigen MTB12	66.7	69.0	48.3
MGA_2829	LOCUS_28040	sequence30:271931..272845(+)	partial			WP_003411405.1	MmpS family transport accessory protein	31.6	32.1	82.3
MGA_2831	LOCUS_28060	sequence30:273462..274454(+)	partial			WP_005112872.1	alpha/beta hydrolase fold domain-containing protein	67.3	65.1	39.3
MGA_2839	LOCUS_28140	sequence30:282118..282447(+)	partial			WP_005074915.1	hypothetical protein	51.4	76.7	75.0
MGA_2869	LOCUS_28440	sequence30:313654..315267(+)	partial			WP_049746059.1	putative lipid II flippase FtsW	75.8	70.7	71.0
MGA_2878	LOCUS_28530	sequence30:323289..323699(+)	partial			WP_011729649.1	hypothetical protein	39.7	35.5	61.7
MGA_2879	LOCUS_28540	sequence30:323718..324383(-)	partial			WP_003411129.1	phosphoribosyltransferase family protein	94.1	59.1	55.3
MGA_2880	LOCUS_28550	sequence30:324456..325331(-)	partial			WP_002668780.1	DUF4143 domain-containing protein	99.7	68.5	37.1
MGA_2900	LOCUS_28750	sequence30:342078..343421(+)	frameshift		343232	WP_005110557.1	DUF1446 domain-containing protein	86.1	67.1	95.1
MGA_2901	LOCUS_28760	sequence30:343447..343803(+)	frameshift		343226	WP_005110557.1	DUF1446 domain-containing protein	100.0	20.6	99.2
MGA_2907	LOCUS_28820	sequence30:351388..351867(-)	partial			WP_005110568.1	TetR/AcrR family transcriptional regulator	100.0	71.0	93.7
MGA_2908	LOCUS_28830	sequence30:351948..352256(+)	frameshift,internal_stop_codon	351896..351898(+)	351931	WP_234794028.1	transposase	100.0	81.6	72.5
MGA_2909	LOCUS_28840	sequence30:352253..353113(+)	frameshift		352232	WP_085976939.1	IS3 family transposase	100.0	73.9	86.0
MGA_2915	LOCUS_28900	sequence30:359329..360057(+)	partial			WP_005061064.1	NAD(P)/FAD-dependent oxidoreductase	100.0	47.9	94.6
MGA_2937	LOCUS_29120	sequence30:384161..384475(+)	partial			WP_003411107.1	hypothetical protein	80.8	62.8	62.8
MGA_2955	LOCUS_29300	sequence30:400407..401000(-)	partial			WP_011729401.1	hypothetical protein	73.1	77.5	46.6
MGA_2979	LOCUS_29540	sequence30:423458..425104(+)	partial			WP_005113275.1	PPE family protein	28.8	32.0	60.1
MGA_2985	LOCUS_29600	sequence30:431748..432608(-)	frameshift		432628	WP_085976939.1	IS3 family transposase	100.0	73.9	84.6
MGA_2996	LOCUS_29680	sequence32:8556..10667(+)	partial			WP_109789858.1	apolipoprotein N-acyltransferase	75.0	82.9	65.5
MGA_3021	LOCUS_29930	sequence33:2549..2863(-)	partial			WP_003899111.1	DUF732 domain-containing protein	88.5	73.6	60.9
MGA_3032	LOCUS_30040	sequence33:13928..14290(+)	partial			WP_128933672.1	IS3 family transposase	46.7	19.7	38.5
MGA_3035	LOCUS_30070	sequence34:1157..2536(-)	partial			WP_003900845.1	alpha/beta hydrolase family protein	63.6	70.5	54.3
MGA_3036	LOCUS_30080	sequence34:2649..4178(-)	partial			WP_011729255.1	serine/threonine-protein kinase	61.9	63.9	63.5
MGA_3051	LOCUS_30230	sequence34:18787..19494(-)	partial			WP_003399745.1	TMEM165/GDT1 family protein	77.9	60.9	62.5
MGA_3057	LOCUS_30290	sequence34:23685..24614(-)	frameshift,internal_stop_codon	24530..24532(-)	24445,24644,24813	WP_235624060.1	LCP family protein	95.1	68.7	63.3
MGA_3064	LOCUS_30360	sequence34:28709..29869(-)	partial			WP_003420892.1	septum formation family protein	81.1	69.9	64.6
MGA_3069	LOCUS_30410	sequence34:34008..34604(+)	frameshift		34454	WP_003897817.1	lysophospholipid acyltransferase family protein	74.7	58.5	73.0
MGA_3070	LOCUS_30420	sequence34:34493..34747(+)	frameshift		34454	WP_003897817.1	lysophospholipid acyltransferase family protein	96.4	32.0	56.8
MGA_3074	LOCUS_30460	sequence34:38177..38788(-)	frameshift		38257	WP_003897814.1	hypothetical protein	78.3	53.1	56.6
MGA_3088	LOCUS_30600	sequence34:58896..59516(+)	frameshift		59387	WP_003900143.1	phosphomethylpyrimidine synthase ThiC	77.7	29.3	79.4
MGA_3089	LOCUS_30610	sequence34:59450..60508(+)	frameshift		59387	WP_003900143.1	phosphomethylpyrimidine synthase ThiC	100.0	64.4	85.8
MGA_3110	LOCUS_30820	sequence35:167..1171(+)	frameshift,internal_stop_codon	1044..1046(+),1011..1013(+)	1082,943	WP_144955419.1	ISL3 family transposase	82.0	66.9	36.3
MGA_3114	LOCUS_30860	sequence35:3832..5697(-)	partial			WP_003405308.1	sensor histidine kinase KdpD	96.8	70.1	59.4
MGA_3118	LOCUS_30900	sequence35:7725..8024(-)	partial			WP_010950346.1	PE family protein	77.8	14.3	48.1
MGA_3128	LOCUS_31000	sequence35:19247..19576(-)	partial			WP_011730439.1	lipoprotein LpqV	95.4	67.3	41.9
MGA_3130	LOCUS_31020	sequence35:20276..20671(+)	partial			WP_003405651.1	rhodanese-like domain-containing protein	74.0	74.0	77.3
MGA_3140	LOCUS_31120	sequence35:30966..31628(+)	partial			WP_011730428.1	RDD family protein	68.6	69.0	52.7
MGA_3143	LOCUS_31150	sequence35:33618..34061(-)	partial			WP_003405744.1	DUF4307 domain-containing protein	74.1	75.7	65.1
MGA_3145	LOCUS_31170	sequence35:35035..35337(+)	partial			WP_005073999.1	hypothetical protein	69.0	71.9	62.3
MGA_3158	LOCUS_31300	sequence35:48417..49448(-)	partial			WP_010950492.1	hypothetical protein	74.9	80.9	43.7
MGA_3168	LOCUS_31400	sequence35:58599..59666(-)	partial			WP_014878271.1	hypothetical protein	56.3	52.4	51.7
MGA_3214	LOCUS_31860	sequence35:104231..>104864(-)	partial			WP_010950642.1	HNH endonuclease signature motif containing protein	45.7	23.0	66.7
MGA_3224	LOCUS_31960	sequence36:9139..9396(-)	partial			WP_003406686.1	F0F1 ATP synthase subunit C	58.8	61.7	94.0
MGA_3234	LOCUS_32060	sequence36:15782..17770(-)	partial			WP_010908150.1	transcription termination factor Rho	60.1	64.9	94.0
MGA_3301	LOCUS_32730	sequence36:90962..92806(-)	partial			WP_011727115.1	hypothetical protein	56.8	58.2	35.9
MGA_3306	LOCUS_32770	sequence36:96336..96719(-)	partial			WP_010908107.1	DivIVA domain-containing protein	74.0	82.5	62.8
MGA_3329	LOCUS_33000	sequence36:122600..123316(+)	partial			WP_003898753.1	PE family protein	44.5	34.4	46.2
MGA_3330	LOCUS_33010	sequence36:123254..123748(-)	partial			WP_003406163.1	hypothetical protein	69.5	78.1	57.9
MGA_3334	LOCUS_33050	sequence36:128513..128782(+)	partial			WP_090422545.1	IS256 family transposase	57.3	16.8	56.5
MGA_3350	LOCUS_33210	sequence37:10979..11908(+)	frameshift		10946	WP_087902221.1	IS3-like element IS987 family transposase	95.1	69.0	67.3
MGA_3352	LOCUS_33230	sequence37:13088..13246(+)	partial			WP_003893212.1	acyl-CoA dehydrogenase	100.0	13.4	96.2
MGA_3356	LOCUS_33270	sequence37:16546..16773(+)	partial			WP_029104552.1	hypothetical protein	69.3	70.3	48.1
MGA_3358	LOCUS_33290	sequence37:17411..19183(-)	partial			WP_012256222.1	ABC transporter ATP-binding protein	42.7	70.7	48.2
MGA_3402	LOCUS_33730	sequence37:66927..67415(-)	partial			WP_003416932.1	Rv3235 family protein	69.1	53.5	48.3
MGA_3431	LOCUS_34020	sequence37:93279..94169(-)	partial			WP_011728023.1	MmpS family transport accessory protein	59.5	65.0	40.4
MGA_3445	LOCUS_34160	sequence37:111333..111602(+)	partial			WP_003893333.1	transcriptional regulator WhiB7	74.2	69.9	62.5
MGA_3458	LOCUS_34290	sequence37:124868..125533(-)	partial			WP_011727450.1	hypothetical protein	64.7	62.7	50.3
MGA_3474	LOCUS_34450	sequence38:183..620(+)	frameshift		124	WP_011730545.1	DUF5642 family protein	89.7	58.2	38.5
MGA_3561	LOCUS_35310	sequence40:23731..24297(+)	internal_stop_codon	24310..24312(+),24295..24297(+)		WP_003415107.1	DNA-binding protein HupB	56.4	49.5	87.7
MGA_3569	LOCUS_35390	sequence40:32369..32584(+)	frameshift		32370	WP_013230879.1	GNAT family N-acetyltransferase	73.2	34.9	65.4
MGA_3601	LOCUS_35700	sequence41:8120..9121(+)	partial			WP_011730088.1	MCE family protein	59.8	60.4	30.1
MGA_3602	LOCUS_35710	sequence41:9109..10077(+)	partial			WP_011730878.1	MCE family protein	59.3	58.2	27.8
MGA_3604	LOCUS_35730	sequence41:11189..12148(+)	partial			WP_005071126.1	MlaD family protein	59.2	55.2	29.7
MGA_3605	LOCUS_35740	sequence41:12163..13101(+)	partial			WP_005079755.1	MlaD family protein	94.6	64.6	25.2
MGA_3630	LOCUS_35990	sequence42:19872..20198(-)	partial			WP_003897753.1	DUF1049 domain-containing protein	80.6	71.9	60.9
MGA_3641	LOCUS_36100	sequence42:29373..31106(-)	partial			WP_012289393.1	NAD-binding protein	35.0	49.7	29.4
MGA_3647	LOCUS_36160	sequence42:36473..38419(+)	frameshift		38369,38218,38315	WP_011731177.1	DNA polymerase III subunits gamma/tau	65.6	62.4	80.2
MGA_3650	LOCUS_36190	sequence42:40772..41551(+)	frameshift		41515	WP_003408560.1	FAD-dependent oxidoreductase	92.3	51.7	65.3
MGA_3651	LOCUS_36200	sequence42:41571..42005(+)	frameshift		41518	WP_003408560.1	FAD-dependent oxidoreductase	97.9	30.9	55.6
MGA_3662	LOCUS_36310	sequence42:51016..51660(+)	partial			WP_053543917.1	IS1249 family transposase	86.9	47.3	38.9
MGA_3679	LOCUS_36480	sequence43:14708..15019(-)	partial			WP_003893151.1	protein UsfY	64.1	69.7	40.6
MGA_3683	LOCUS_36520	sequence43:17978..18166(-)	partial			WP_011727890.1	CDGSH iron-sulfur domain-containing protein	82.3	73.2	65.4
MGA_3686	LOCUS_36550	sequence43:21047..21319(+)	partial			WP_013225972.1	hypothetical protein	68.9	40.5	54.8
MGA_3690	LOCUS_36590	sequence43:22754..23200(+)	partial			WP_011727905.1	STAS domain-containing protein	65.5	69.0	39.8
MGA_3695	LOCUS_36640	sequence43:25114..25359(+)	partial			WP_005058264.1	CsbD family protein	70.4	73.1	54.4
MGA_3696	LOCUS_36650	sequence43:25628..26026(-)	partial			WP_003417165.1	hypothetical protein	65.2	67.2	44.2
MGA_3716	LOCUS_36850	sequence43:49366..50910(-)	partial			WP_003900817.1	PE-PPE domain-containing protein	60.9	57.6	37.4
MGA_3717	LOCUS_36860	sequence43:50995..52542(-)	partial			WP_010950605.1	PPE family protein	65.0	44.0	32.1
MGA_3718	LOCUS_36870	sequence43:52651..54039(-)	partial			WP_003400998.1	PE-PPE domain-containing protein	61.7	46.1	35.4
MGA_3729	LOCUS_36980	sequence43:63100..63705(+)	partial			WP_003905037.1	IS110 family transposase	99.5	34.7	74.0
MGA_3739	LOCUS_37080	sequence43:72793..74547(-)	partial			WP_011727070.1	PPE family protein	42.8	47.6	48.0
MGA_3755	LOCUS_37240	sequence43:90756..91301(-)	partial			WP_005110063.1	hypothetical protein	54.7	40.7	63.8
MGA_3764	LOCUS_37330	sequence43:103257..103658(+)	partial			WP_011203343.1	serine hydrolase	67.7	16.8	44.4
MGA_3774	LOCUS_37430	sequence43:114729..115775(-)	partial			WP_003418011.1	anti-sigma D factor RsdA	69.0	77.9	43.3
MGA_3820	LOCUS_37880	sequence45:34..1002(-)	frameshift		1075	WP_011727856.1	IS256 family transposase	100.0	73.6	87.3
MGA_3854	LOCUS_38220	sequence45:29920..30720(+)	partial			WP_003419679.1	type II secretion system F family protein	73.7	73.3	42.3
MGA_3857	LOCUS_38250	sequence45:31616..31861(+)	partial			WP_010886180.1	apoptosis inhibitor	100.0	64.8	53.1
MGA_3872	LOCUS_38400	sequence45:50088..50519(+)	partial			WP_003402171.1	hypothetical protein	66.4	64.6	40.0
MGA_3888	LOCUS_38560	sequence45:68295..69710(+)	partial			WP_003419534.1	membrane protein	43.5	51.4	58.0
MGA_3925	LOCUS_38930	sequence45:104941..105327(-)	partial			WP_011730575.1	heme-binding protein	64.1	68.3	37.8
MGA_3939	LOCUS_39070	sequence45:118839..119441(-)	partial			WP_005114808.1	PepSY domain-containing protein	67.0	69.8	46.3
MGA_3983	LOCUS_39500	sequence46:15550..16746(+)	partial			WP_003414680.1	PPE family protein	37.4	36.5	32.0
MGA_3989	LOCUS_39560	sequence46:20991..22619(+)	partial			WP_003400012.1	type VII secretion system ESX-2 serine protease mycosin MycP2	58.3	57.8	65.4
MGA_4000	LOCUS_39670	sequence46:34716..35675(+)	partial			WP_005079755.1	MlaD family protein	74.6	52.2	25.7
MGA_4029	LOCUS_39960	sequence47:14588..15262(+)	partial			WP_014878484.1	hypothetical protein	65.2	62.2	54.1
MGA_4064	LOCUS_40290	sequence48:330..596(-)	partial			WP_003900767.1	hypothetical protein	96.6	71.4	69.4
