{ "type": "genome", "identifier": "GCF_025823005.1", "organism": "Mycolicibacterium duvalii", "title": "Mycolicibacterium duvalii", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Uppsala University", "publication": [ {} ], "properties": { "assembly_accession": "GCF_025823005.1", "bioproject": "PRJNA224116", "biosample": "SAMN15568930", "wgs_master": "JACKUY000000000.1", "refseq_category": "na", "taxid": "39688", "species_taxid": "39688", "organism_name": "Mycolicibacterium duvalii", "infraspecific_name": "strain=DSM 44244", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2022/10/24", "asm_name": "ASM2582300v1", "asm_submitter": "Uppsala University", "gbrs_paired_asm": "GCA_025823005.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/025/823/005/GCF_025823005.1_ASM2582300v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "5612033", "genome_size_ungapped": "5611586", "gc_percent": "68.500000", "replicon_count": "0", "scaffold_count": "39", "contig_count": "39", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_025823005.1-RS_2024_07_07", "annotation_date": "2024-07-07", "total_gene_count": "5433", "protein_coding_gene_count": "5283", "non_coding_gene_count": "54", "pubmed_id": "36243697" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2022-10-24", "dateModified": "2022-10-24", "datePublished": "2022-10-24", "_annotation": { "sample_count": 1, "sample_organism": [ "Mycolicibacterium duvalii" ], "sample_taxid": [ "39688" ], "sample_host_organism": [ "Homo sapiens" ], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "not collected" ], "sample_host_location_id": [], "data_size": "1.530 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": 37.0, "max": 37.0 }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "5612033", "Number of Sequences": "39", "Longest Sequences (bp)": "650438", "N50 (bp)": "279472", "Gap Ratio (%)": "0.009622", "GCcontent (%)": "68.3", "Number of CDSs": "5381", "Average Protein Length": "323.3", "Coding Ratio (%)": "93.0", "Number of rRNAs": "3", "Number of tRNAs": "54", "Number of CRISPRs": "1" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Mycolicibacterium vaccae", "strain": "strain=NBRC 14118", "accession": "GCA_001552715.1", "taxid": 1810, "species_taxid": 1810, "relation_to_type": "type", "validated": true, "ani": 82.422, "matched_fragments": 1074, "total_fragments": 1853, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium vaccae", "strain": "strain=95051", "accession": "GCA_001655245.1", "taxid": 1810, "species_taxid": 1810, "relation_to_type": "type", "validated": true, "ani": 82.3715, "matched_fragments": 1167, "total_fragments": 1853, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium chubuense", "strain": "strain=DSM 44219", "accession": "GCA_002086595.1", "taxid": 1800, "species_taxid": 1800, "relation_to_type": "type", "validated": true, "ani": 81.9931, "matched_fragments": 1100, "total_fragments": 1853, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium chubuense", "strain": "strain=NCTC10819", "accession": "GCA_900453455.1", "taxid": 1800, "species_taxid": 1800, "relation_to_type": "type", "validated": true, "ani": 81.9859, "matched_fragments": 1117, "total_fragments": 1853, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium chubuense", "strain": "strain=DSM 44219", "accession": "GCA_001044255.1", "taxid": 1800, "species_taxid": 1800, "relation_to_type": "type", "validated": true, "ani": 81.9392, "matched_fragments": 1097, "total_fragments": 1853, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium psychrotolerans", "strain": "strain=JCM 13323", "accession": "GCA_010729305.1", "taxid": 216929, "species_taxid": 216929, "relation_to_type": "type", "validated": true, "ani": 81.893, "matched_fragments": 1117, "total_fragments": 1853, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium phlei", "strain": "strain=DSM 43239 = CCUG 21000", "accession": "GCA_001582015.1", "taxid": 1771, "species_taxid": 1771, "relation_to_type": "type", "validated": true, "ani": 81.3687, "matched_fragments": 1054, "total_fragments": 1853, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium phlei", "strain": "strain=CCUG 21000", "accession": "GCA_009192875.1", "taxid": 1771, "species_taxid": 1771, "relation_to_type": "type", "validated": true, "ani": 81.3544, "matched_fragments": 1057, "total_fragments": 1853, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium phlei", "strain": "strain=CCUG 21000", "accession": "GCA_001583415.1", "taxid": 1771, "species_taxid": 1771, "relation_to_type": "type", "validated": true, "ani": 81.3527, "matched_fragments": 1056, "total_fragments": 1853, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium rutilum", "strain": "strain=DSM 45405", "accession": "GCA_900108565.1", "taxid": 370526, "species_taxid": 370526, "relation_to_type": "type", "validated": true, "ani": 81.1686, "matched_fragments": 1056, "total_fragments": 1853, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium aurum", "strain": "strain=NCTC10437", "accession": "GCA_900637195.1", "taxid": 1791, "species_taxid": 1791, "relation_to_type": "type", "validated": true, "ani": 81.0466, "matched_fragments": 1096, "total_fragments": 1853, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium aurum", "strain": "strain=NCTC 10437", "accession": "GCA_001049355.1", "taxid": 1791, "species_taxid": 1791, "relation_to_type": "type", "validated": true, "ani": 81.0064, "matched_fragments": 1103, "total_fragments": 1853, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium malmesburyense", "strain": "strain=WCM 7299", "accession": "GCA_001050015.1", "taxid": 1566886, "species_taxid": 1566886, "relation_to_type": "type", "validated": true, "ani": 80.5614, "matched_fragments": 979, "total_fragments": 1853, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium baixiangningiae", "strain": "strain=LJ126", "accession": "GCA_014893035.1", "taxid": 2761578, "species_taxid": 2761578, "relation_to_type": "type", "validated": true, "ani": 80.3789, "matched_fragments": 940, "total_fragments": 1853, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium baixiangningiae", "strain": "strain=LJ126", "accession": "GCA_016313185.1", "taxid": 2761578, "species_taxid": 2761578, "relation_to_type": "type", "validated": true, "ani": 80.343, "matched_fragments": 941, "total_fragments": 1853, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycobacterium doricum", "strain": "strain=JCM 12405", "accession": "GCA_010728155.1", "taxid": 126673, "species_taxid": 126673, "relation_to_type": "type", "validated": true, "ani": 80.2697, "matched_fragments": 710, "total_fragments": 1853, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycobacterium doricum", "strain": "strain=DSM 44339", "accession": "GCA_002102115.1", "taxid": 126673, "species_taxid": 126673, "relation_to_type": "type", "validated": true, "ani": 80.2515, "matched_fragments": 690, "total_fragments": 1853, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium houstonense", "strain": "strain=type strain: ATCC 49403", "accession": "GCA_900078665.2", "taxid": 146021, "species_taxid": 146021, "relation_to_type": "type", "validated": true, "ani": 79.924, "matched_fragments": 927, "total_fragments": 1853, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium moriokaense", "strain": "strain=JCM 6375", "accession": "GCA_010726085.1", "taxid": 39691, "species_taxid": 39691, "relation_to_type": "type", "validated": true, "ani": 79.8779, "matched_fragments": 918, "total_fragments": 1853, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium moriokaense", "strain": "strain=CIP105393", "accession": "GCA_002086395.1", "taxid": 39691, "species_taxid": 39691, "relation_to_type": "type", "validated": true, "ani": 79.8188, "matched_fragments": 917, "total_fragments": 1853, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium lacusdiani", "strain": "strain=JXJ CY 35", "accession": "GCA_021916785.1", "taxid": 2895283, "species_taxid": 2895283, "relation_to_type": "type", "validated": true, "ani": 79.7768, "matched_fragments": 896, "total_fragments": 1853, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium fortuitum subsp. fortuitum", "strain": "strain=JCM 6387", "accession": "GCA_022179545.1", "taxid": 144549, "species_taxid": 1766, "relation_to_type": "type", "validated": true, "ani": 79.751, "matched_fragments": 845, "total_fragments": 1853, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium mageritense", "strain": "strain=CIP 104973", "accession": "GCA_000612825.1", "taxid": 53462, "species_taxid": 53462, "relation_to_type": "type", "validated": true, "ani": 79.6939, "matched_fragments": 895, "total_fragments": 1853, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycobacterium pallens", "strain": "strain=JCM 16370", "accession": "GCA_019456675.1", "taxid": 370524, "species_taxid": 370524, "relation_to_type": "type", "validated": true, "ani": 79.6074, "matched_fragments": 832, "total_fragments": 1853, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycobacterium crocinum", "strain": "strain=JCM 16369", "accession": "GCA_022370635.3", "taxid": 388459, "species_taxid": 388459, "relation_to_type": "type", "validated": true, "ani": 79.5891, "matched_fragments": 833, "total_fragments": 1853, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium anyangense", "strain": "strain=JCM 30275", "accession": "GCA_010731855.1", "taxid": 1431246, "species_taxid": 1431246, "relation_to_type": "type", "validated": true, "ani": 79.4629, "matched_fragments": 794, "total_fragments": 1853, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_010726645.1", "gtdb_species": "s__Mycobacterium duvalii", "ani": 99.994, "matched_fragments": 1851, "total_fragments": 1853, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Mycobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "conclusive" }, { "accession": "GCF_001545925.1", "gtdb_species": "s__Mycobacterium sp001545925", "ani": 82.6176, "matched_fragments": 981, "total_fragments": 1853, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Mycobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001552715.1", "gtdb_species": "s__Mycobacterium vaccae", "ani": 82.3996, "matched_fragments": 1078, "total_fragments": 1853, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Mycobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.99", "min_intra_species_ani": "99.97", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_900454025.1", "gtdb_species": "s__Mycobacterium gilvum", "ani": 82.3043, "matched_fragments": 1214, "total_fragments": 1853, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Mycobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.87", "min_intra_species_ani": "97.81", "mean_intra_species_af": "0.88", "min_intra_species_af": "0.86", "num_clustered_genomes": 5, "status": "-" }, { "accession": "GCF_001722335.1", "gtdb_species": "s__Mycobacterium flavescens_A", "ani": 82.1646, "matched_fragments": 1093, "total_fragments": 1853, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Mycobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000612725.1", "gtdb_species": "s__Mycobacterium austroafricanum", "ani": 82.1076, "matched_fragments": 1165, "total_fragments": 1853, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Mycobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.53", "min_intra_species_ani": "98.42", "mean_intra_species_af": "0.88", "min_intra_species_af": "0.88", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_002086815.1", "gtdb_species": "s__Mycobacterium parafortuitum", "ani": 82.0782, "matched_fragments": 1155, "total_fragments": 1853, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Mycobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_000762985.1", "gtdb_species": "s__Mycobacterium rufum_A", "ani": 81.9492, "matched_fragments": 1129, "total_fragments": 1853, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Mycobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_010725485.1", "gtdb_species": "s__Mycobacterium sp002946335", "ani": 81.9216, "matched_fragments": 1184, "total_fragments": 1853, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Mycobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.86", "min_intra_species_ani": "98.86", "mean_intra_species_af": "0.96", "min_intra_species_af": "0.96", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_000266905.1", "gtdb_species": "s__Mycobacterium chubuense_A", "ani": 81.7485, "matched_fragments": 1164, "total_fragments": 1853, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Mycobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001583415.1", "gtdb_species": "s__Mycobacterium phlei", "ani": 81.3426, "matched_fragments": 1058, "total_fragments": 1853, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Mycobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.86", "min_intra_species_ani": "99.38", "mean_intra_species_af": "0.98", "min_intra_species_af": "0.91", "num_clustered_genomes": 10, "status": "-" }, { "accession": "GCF_007096635.1", "gtdb_species": "s__Mycobacterium sp007096635", "ani": 81.2358, "matched_fragments": 960, "total_fragments": 1853, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Mycobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_900108565.1", "gtdb_species": "s__Mycobacterium rutilum", "ani": 81.1863, "matched_fragments": 1054, "total_fragments": 1853, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Mycobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_900637195.1", "gtdb_species": "s__Mycobacterium aurum", "ani": 81.0489, "matched_fragments": 1096, "total_fragments": 1853, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Mycobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.99", "min_intra_species_ani": "99.99", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_001500125.1", "gtdb_species": "s__Mycobacterium sp001500125", "ani": 80.7465, "matched_fragments": 985, "total_fragments": 1853, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Mycobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001050015.1", "gtdb_species": "s__Mycobacterium malmesburyense", "ani": 80.5432, "matched_fragments": 983, "total_fragments": 1853, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Mycobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001500025.1", "gtdb_species": "s__Mycobacterium sp001500025", "ani": 80.3955, "matched_fragments": 950, "total_fragments": 1853, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Mycobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_016313185.1", "gtdb_species": "s__Mycobacterium sp016313185", "ani": 80.3603, "matched_fragments": 939, "total_fragments": 1853, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Mycobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.68", "min_intra_species_ani": "97.36", "mean_intra_species_af": "0.93", "min_intra_species_af": "0.85", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_010728155.1", "gtdb_species": "s__Mycobacterium doricum", "ani": 80.2614, "matched_fragments": 711, "total_fragments": 1853, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Mycobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_900637135.1", "gtdb_species": "s__Mycobacterium flavescens", "ani": 80.2115, "matched_fragments": 945, "total_fragments": 1853, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Mycobacterium", "ani_circumscription_radius": 95.2034, "mean_intra_species_ani": "98.19", "min_intra_species_ani": "96.77", "mean_intra_species_af": "0.93", "min_intra_species_af": "0.88", "num_clustered_genomes": 4, "status": "-" }, { "accession": "GCF_001499905.1", "gtdb_species": "s__Mycobacterium sp001499905", "ani": 80.1441, "matched_fragments": 910, "total_fragments": 1853, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Mycobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }, "_bac2feature": { "phenotypes": null, "cell_diameter": null, "cell_length": null, "doubling_h": null, "growth_tmp": null, "optimum_tmp": null, "optimum_ph": null, "genome_size": null, "gc_content": null, "coding_genes": null, "rRNA16S_genes": null, "tRNA_genes": null, "gram_stain": null, "sporulation": null, "motility": null, "range_salinity": null, "facultative_respiration": null, "anaerobic_respiration": null, "aerobic_respiration": null, "mesophilic_range_tmp": null, "thermophilic_range_tmp": null, "psychrophilic_range_tmp": null, "bacillus_cell_shape": null, "coccus_cell_shape": null, "filament_cell_shape": null, "coccobacillus_cell_shape": null, "vibrio_cell_shape": null, "spiral_cell_shape": null }, "_genome_taxon": [ "Mycolicibacterium", "duvalii" ], "quality": 4, "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f" }