{ "type": "genome", "identifier": "GCF_025823185.1", "organism": "Mycobacterium yunnanensis", "title": "Mycobacterium yunnanensis", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Uppsala University", "publication": [ {} ], "properties": { "assembly_accession": "GCF_025823185.1", "bioproject": "PRJNA224116", "biosample": "SAMN15568918", "wgs_master": "JACKVK000000000.1", "refseq_category": "reference genome", "taxid": "368477", "species_taxid": "368477", "organism_name": "Mycobacterium yunnanensis", "infraspecific_name": "strain=DSM 44838", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2022/10/24", "asm_name": "ASM2582318v1", "asm_submitter": "Uppsala University", "gbrs_paired_asm": "GCA_025823185.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/025/823/185/GCF_025823185.1_ASM2582318v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "6452568", "genome_size_ungapped": "6452539", "gc_percent": "68.000000", "replicon_count": "0", "scaffold_count": "25", "contig_count": "25", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_025823185.1-RS_2024_08_29", "annotation_date": "2024-08-29", "total_gene_count": "6246", "protein_coding_gene_count": "6095", "non_coding_gene_count": "56", "pubmed_id": "36243697" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2022-10-24", "dateModified": "2022-10-24", "datePublished": "2022-10-24", "_annotation": { "sample_count": 1, "sample_organism": [ "Mycobacterium yunnanensis" ], "sample_taxid": [ "368477" ], "sample_host_organism": [ "not applicable" ], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], 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"strain": "strain=NCTC 10437", "accession": "GCA_001049355.1", "taxid": 1791, "species_taxid": 1791, "relation_to_type": "type", "validated": true, "ani": 79.507, "matched_fragments": 912, "total_fragments": 2141, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium aurum", "strain": "strain=NCTC10437", "accession": "GCA_900637195.1", "taxid": 1791, "species_taxid": 1791, "relation_to_type": "type", "validated": true, "ani": 79.4999, "matched_fragments": 907, "total_fragments": 2141, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium wolinskyi", "strain": "strain=ATCC 700010", "accession": "GCA_002101965.1", "taxid": 59750, "species_taxid": 59750, "relation_to_type": "type", "validated": true, "ani": 79.4019, "matched_fragments": 909, "total_fragments": 2141, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium neworleansense", "strain": "strain=type strain: ATCC 49404", 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