{ "type": "genome", "identifier": "GCF_025994335.1", "organism": "Tanticharoenia sakaeratensis NBRC 103193", "title": "Tanticharoenia sakaeratensis NBRC 103193", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Tokyo University of Agriculture", "publication": [ {} ], "properties": { "assembly_accession": "GCF_025994335.1", "bioproject": "PRJNA224116", "biosample": "SAMD00036706", "wgs_master": "BAQF00000000.1", "refseq_category": "na", "taxid": "1231623", "species_taxid": "444053", "organism_name": "Tanticharoenia sakaeratensis NBRC 103193", "infraspecific_name": "strain=NBRC 103193", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2022/08/03", "asm_name": "ASM2599433v1", "asm_submitter": "Tokyo University of Agriculture", "gbrs_paired_asm": "GCA_025994335.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/025/994/335/GCF_025994335.1_ASM2599433v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "3509930", "genome_size_ungapped": "3509930", "gc_percent": "64.000000", "replicon_count": "0", "scaffold_count": "80", "contig_count": "80", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_025994335.1-RS_2024_12_16", "annotation_date": "2024-12-16", "total_gene_count": "3212", "protein_coding_gene_count": "3129", "non_coding_gene_count": "52", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2022-08-03", "dateModified": "2022-08-03", "datePublished": "2022-08-03", "_annotation": { "sample_count": 1, "sample_organism": [ "Tanticharoenia sakaeratensis NBRC 103193" ], "sample_taxid": [ "1231623" ], "sample_host_organism": [], 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"status": "below_threshold" }, { "organism_name": "Komagataeibacter melaceti", "strain": "strain=AV382", "accession": "GCA_003403295.1", "taxid": 2766577, "species_taxid": 2766577, "relation_to_type": "type", "validated": true, "ani": 77.8428, "matched_fragments": 170, "total_fragments": 1136, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Gluconacetobacter liquefaciens", "strain": "strain=LMG 1382", "accession": "GCA_014174285.1", "taxid": 89584, "species_taxid": 89584, "relation_to_type": "type", "validated": true, "ani": 77.8112, "matched_fragments": 255, "total_fragments": 1136, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Asaia bogorensis", "strain": "strain=NBRC 16594", "accession": "GCA_007989265.1", "taxid": 91915, "species_taxid": 91915, "relation_to_type": "suspected-type", "validated": true, "ani": 77.7222, "matched_fragments": 181, "total_fragments": 1136, "ani_threshold": 95, "status": "below_threshold" }, { 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