{ "type": "genome", "identifier": "GCF_025994435.1", "organism": "Gluconacetobacter johannae DSM 13595", "title": "Gluconacetobacter johannae DSM 13595", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Tokyo University of Agriculture", "publication": [ {} ], "properties": { "assembly_accession": "GCF_025994435.1", "bioproject": "PRJNA224116", "biosample": "SAMD00036711", "wgs_master": "BAQK00000000.1", "refseq_category": "reference genome", "taxid": "1307935", "species_taxid": "112140", "organism_name": "Gluconacetobacter johannae DSM 13595", "infraspecific_name": "strain=DSM 13595", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2022/08/03", "asm_name": "ASM2599443v1", "asm_submitter": "Tokyo University of Agriculture", "gbrs_paired_asm": "GCA_025994435.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/025/994/435/GCF_025994435.1_ASM2599443v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "3631771", "genome_size_ungapped": "3631771", "gc_percent": "67.500000", "replicon_count": "0", "scaffold_count": "136", "contig_count": "136", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_025994435.1-RS_2024_12_16", "annotation_date": "2024-12-16", "total_gene_count": "3408", "protein_coding_gene_count": "3296", "non_coding_gene_count": "54", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2022-08-03", "dateModified": "2022-08-03", "datePublished": "2022-08-03", "_annotation": { "sample_count": 1, "sample_organism": [ "Gluconacetobacter johannae DSM 13595" ], "sample_taxid": [ "1307935" ], "sample_host_organism": [], 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"num_clustered_genomes": 4, "status": "-" } ] }, "_bac2feature": { "phenotypes": null, "cell_diameter": -0.302, "cell_length": 0.176, "doubling_h": null, "growth_tmp": 28.0, "optimum_tmp": 25.833, "optimum_ph": null, "genome_size": 4063757.875, "gc_content": 63.949, "coding_genes": 3555.0, "rRNA16S_genes": 4.0, "tRNA_genes": 55.0, "gram_stain": 0.0, "sporulation": 0.0, "motility": 0.833, "range_salinity": null, "facultative_respiration": 0.0, "anaerobic_respiration": 0.0, "aerobic_respiration": 1.0, "mesophilic_range_tmp": 1.0, "thermophilic_range_tmp": 0.0, "psychrophilic_range_tmp": 0.0, "bacillus_cell_shape": 1.0, "coccus_cell_shape": 0.0, "filament_cell_shape": 0.0, "coccobacillus_cell_shape": 0.0, "vibrio_cell_shape": 0.0, "spiral_cell_shape": 0.0 }, "_genome_taxon": [ "Gluconacetobacter", "johannae", "DSM", "13595" ], "quality": 4, "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f" }